##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064048_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 44244 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.36332610071422 32.0 32.0 32.0 32.0 32.0 2 31.483432781846126 32.0 32.0 32.0 32.0 32.0 3 31.526805894584577 32.0 32.0 32.0 32.0 32.0 4 31.62410722357834 32.0 32.0 32.0 32.0 32.0 5 31.57840611156315 32.0 32.0 32.0 32.0 32.0 6 35.167638549859866 36.0 36.0 36.0 36.0 36.0 7 35.18811590272127 36.0 36.0 36.0 36.0 36.0 8 35.169469306572644 36.0 36.0 36.0 36.0 36.0 9 35.238292197812136 36.0 36.0 36.0 36.0 36.0 10 35.103833288129465 36.0 36.0 36.0 36.0 36.0 11 35.25881475454299 36.0 36.0 36.0 36.0 36.0 12 35.17105144200344 36.0 36.0 36.0 36.0 36.0 13 35.18752825241841 36.0 36.0 36.0 36.0 36.0 14 35.11908959406925 36.0 36.0 36.0 36.0 36.0 15 35.11217340204321 36.0 36.0 36.0 36.0 36.0 16 35.13558900641895 36.0 36.0 36.0 36.0 36.0 17 35.09153783563873 36.0 36.0 36.0 36.0 36.0 18 35.1024545701112 36.0 36.0 36.0 36.0 36.0 19 35.087514691257574 36.0 36.0 36.0 36.0 36.0 20 35.095741795497695 36.0 36.0 36.0 36.0 36.0 21 35.07343368592352 36.0 36.0 36.0 36.0 36.0 22 35.07205496790525 36.0 36.0 36.0 36.0 36.0 23 35.002395805080916 36.0 36.0 36.0 36.0 36.0 24 35.01643160654552 36.0 36.0 36.0 36.0 36.0 25 35.00890516228189 36.0 36.0 36.0 36.0 36.0 26 34.91849742337944 36.0 36.0 36.0 36.0 36.0 27 34.89752282795407 36.0 36.0 36.0 36.0 36.0 28 34.94552933731127 36.0 36.0 36.0 36.0 36.0 29 34.92179730584938 36.0 36.0 36.0 36.0 36.0 30 34.90016725431697 36.0 36.0 36.0 36.0 36.0 31 34.904936262544076 36.0 36.0 36.0 36.0 36.0 32 34.87238947653919 36.0 36.0 36.0 32.0 36.0 33 34.83358195461531 36.0 36.0 36.0 36.0 36.0 34 34.81357924238315 36.0 36.0 36.0 32.0 36.0 35 34.75298345538378 36.0 36.0 36.0 32.0 36.0 36 34.76475906337583 36.0 36.0 36.0 32.0 36.0 37 34.701948286773344 36.0 36.0 36.0 32.0 36.0 38 34.66849742337944 36.0 36.0 36.0 32.0 36.0 39 34.67229454841335 36.0 36.0 36.0 32.0 36.0 40 34.651161739444895 36.0 36.0 36.0 32.0 36.0 41 34.64935358466685 36.0 36.0 36.0 32.0 36.0 42 34.644765391917545 36.0 36.0 36.0 32.0 36.0 43 34.577298616761595 36.0 36.0 36.0 32.0 36.0 44 34.535462435584485 36.0 36.0 36.0 32.0 36.0 45 34.51792333423741 36.0 36.0 36.0 32.0 36.0 46 34.48718470301058 36.0 36.0 36.0 32.0 36.0 47 34.474301600216975 36.0 36.0 36.0 32.0 36.0 48 34.41625983184161 36.0 36.0 36.0 32.0 36.0 49 34.415287948648405 36.0 36.0 36.0 32.0 36.0 50 33.8174215712865 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 2.0 22 9.0 23 14.0 24 38.0 25 79.0 26 177.0 27 321.0 28 474.0 29 753.0 30 980.0 31 1421.0 32 1904.0 33 3118.0 34 6297.0 35 28657.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.06419674947445 20.601731503876668 13.75709215850268 25.576979588146205 2 14.162372299068801 22.642618208118613 39.30476448784016 23.890245004972428 3 16.169424102703193 27.3099177289576 30.97821173492451 25.5424464334147 4 11.086248982912936 19.331434770816383 38.45493174215713 31.127384504113554 5 12.19148359099539 38.916011210559624 35.37202784558358 13.520477352861404 6 28.19365337672905 40.30829038965735 18.93590091311816 12.562155320495435 7 27.29409637464967 32.96040141036073 22.28550763945394 17.459994575535664 8 26.195642346984904 33.88256034716572 21.76792333423741 18.15387397161197 9 27.73257390832655 15.170418587831119 20.188048096917097 36.908959406925234 10 14.207576168520026 29.8413344182262 34.34363981556821 21.607449597685562 11 32.24844046650393 24.76493987885363 24.177289575987704 18.80933007865473 12 22.330711508905164 28.03770002712232 30.085435313262813 19.5461531507097 13 28.458096013018714 22.095651387758792 27.104240122954526 22.342012476267968 14 22.18379893318868 21.218696320405027 28.43323388482054 28.16427086158575 15 23.692418968401068 29.636996519144702 24.031463315401655 22.639121197052575 16 23.043193273512195 28.135524263725337 25.9340460637841 22.88723639897837 17 22.17927854624356 29.2288219871621 26.921164451677065 21.670735014917277 18 21.880933007865476 28.132628152969897 28.225296085344905 21.761142753819726 19 23.44724708435042 26.776512069433146 28.184612602838804 21.591628243377635 20 23.70425623290613 27.149024660382903 27.24395922334486 21.90275988336611 21 24.611246722719464 26.530150980923967 26.79007323026851 22.068529066088058 22 23.655184883826056 27.264713859506372 27.630865202061294 21.449236054606274 23 23.671006238133984 27.343820631046018 26.887261549588644 22.09791158123135 24 22.748847301328993 27.74613506916192 27.011572190579514 22.49344543892957 25 23.17533509640379 27.632738862141455 27.497118057910086 21.694807983544674 26 22.553229962479094 27.33601555083405 27.948555671081778 22.16219881560508 27 23.359479192567644 26.994281064219354 27.473496236352542 22.172743506860463 28 21.80005876635852 27.18848179373008 28.110661573582263 22.900797866329135 29 22.44648871007843 27.27663133151007 27.355739891056214 22.92114006735529 30 22.725012431626055 26.87943583020659 27.31115229872067 23.084399439446678 31 22.718231544686045 26.777722526106412 28.12033814022874 22.3837077889788 32 22.672513165924553 27.868815405826908 26.942115136857808 22.516556291390728 33 22.693368292572668 27.600470141494508 27.812937932281546 21.89322363365128 34 23.038672784395274 26.469724024139413 27.999909590217666 22.491693601247658 35 22.84758481951131 27.653081982776158 27.700549264257134 21.798783933455393 36 22.766726943942135 26.774412296564194 27.655967450271245 22.802893309222423 37 23.407092647424452 26.31828763872251 27.473272608096195 22.801347105756843 38 22.39726956285882 27.281768455313955 27.71574521947471 22.605216762352516 39 22.174001491828847 27.225876449447345 27.354716213467146 23.245405845256663 40 22.008001265736954 27.174920326379315 27.871075650385375 22.94600275749836 41 22.63234031011256 26.280457483838887 28.78034446905655 22.306857736991997 42 23.33250457699523 25.913703862757952 27.484573830888504 23.269217729358317 43 21.779716565332368 26.14424880772099 28.52880681689759 23.547227810049048 44 22.174758159298435 26.955067353765482 27.94955248169243 22.920622005243647 45 22.482144471566766 26.726787813036797 27.54271765663141 23.24835005876503 46 22.256125124310643 26.211463701292832 28.329264985082723 23.203146189313806 47 22.200122053206155 27.421286983251587 27.690256085708477 22.688334877833782 48 21.11520466514477 27.251768641366997 28.15812670930995 23.474899984178286 49 21.780208851317752 26.49066497897925 28.391573617829213 23.337552551873785 50 21.25711960943857 26.81945574541181 29.045746315884642 22.877678329264985 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 4.0 6 7.0 7 7.5 8 8.0 9 9.5 10 11.0 11 17.0 12 23.0 13 38.0 14 53.0 15 78.0 16 103.0 17 95.0 18 87.0 19 75.0 20 63.0 21 110.5 22 158.0 23 243.5 24 329.0 25 473.5 26 618.0 27 705.0 28 792.0 29 855.5 30 919.0 31 1166.5 32 1414.0 33 1545.0 34 1676.0 35 1915.5 36 2155.0 37 2363.0 38 2571.0 39 2989.0 40 3407.0 41 3611.5 42 3816.0 43 3661.5 44 3507.0 45 3483.5 46 3460.0 47 3570.5 48 3681.0 49 3463.0 50 3245.0 51 3034.0 52 2823.0 53 2511.5 54 2200.0 55 2141.5 56 2083.0 57 1777.0 58 1471.0 59 1308.0 60 1145.0 61 1009.0 62 873.0 63 695.0 64 517.0 65 389.0 66 261.0 67 235.5 68 210.0 69 161.0 70 112.0 71 141.5 72 171.0 73 177.0 74 183.0 75 119.0 76 55.0 77 34.5 78 14.0 79 16.0 80 18.0 81 10.0 82 2.0 83 1.0 84 0.0 85 0.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.011300967362806256 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.004520386945122502 16 0.002260193472561251 17 0.0 18 0.0 19 0.0 20 0.006780580417683754 21 0.0 22 0.0 23 0.0 24 0.0 25 0.006780580417683754 26 0.004520386945122502 27 0.011300967362806256 28 0.002260193472561251 29 0.002260193472561251 30 0.004520386945122502 31 0.004520386945122502 32 0.002260193472561251 33 0.004520386945122502 34 0.002260193472561251 35 0.006780580417683754 36 0.009040773890245005 37 0.002260193472561251 38 0.004520386945122502 39 0.006780580417683754 40 0.002260193472561251 41 0.004520386945122502 42 0.002260193472561251 43 0.002260193472561251 44 0.0 45 0.0 46 0.0 47 0.002260193472561251 48 0.002260193472561251 49 0.004520386945122502 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 44244.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.38821083084712 #Duplication Level Percentage of deduplicated Percentage of total 1 63.014032352367956 29.231082180634658 2 15.396608848177742 14.284422746587108 3 7.225687000584681 10.055600759425007 4 4.487429351003703 8.32655275291565 5 2.8064704735918924 6.509357200976404 6 1.8466185928668875 5.139679956604285 7 1.2034691093354122 3.9078745140584035 8 0.794192165269928 2.9472922882198715 9 0.7552134086922627 3.1529698942229456 >10 2.47027869810953 16.445167706355665 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CATTAGTAGAACGCAAAATCTTAGGGTACATACAACTACGAAAAGGCCCT 46 0.10396889973781755 No Hit CCCCTATACTATATCAATTTACCAGAACTCTACTCAACTAACTTCATAAT 46 0.10396889973781755 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.002260193472561251 0.0 26 0.0 0.0 0.0 0.002260193472561251 0.0 27 0.0 0.0 0.0 0.002260193472561251 0.0 28 0.0 0.0 0.0 0.0067805804176837535 0.0 29 0.0 0.0 0.0 0.029382515143296265 0.0 30 0.0 0.0 0.0 0.06554561070427628 0.0 31 0.0 0.0 0.0 0.13787180182623632 0.0 32 0.0 0.0 0.0 0.22375915378356387 0.0 33 0.0 0.0 0.0 0.30060573185064643 0.0 34 0.0 0.0 0.0 0.40457463158846396 0.0 35 0.0 0.0 0.0 0.49724256396347527 0.0 36 0.0 0.0 0.0 0.6464153331525179 0.0 37 0.0 0.0 0.0 0.8385317783202242 0.0 38 0.0 0.0 0.0 1.114275381972697 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATTTGC 20 7.774511E-4 44.0 19 CAATTTG 20 7.774511E-4 44.0 18 ATGTCTT 20 7.774511E-4 44.0 11 CTTCTCA 30 1.2809587E-4 36.666664 29 GGTATCA 50 5.7278157E-8 35.2 1 CTCAAGG 25 0.0023284317 35.2 32 CTTCAAT 30 0.005686099 29.333332 15 CCTGTAA 30 0.005686099 29.333332 42 TTCTTCT 40 6.924802E-4 27.5 27 TTCTCAA 40 6.924802E-4 27.5 30 TTTGCTT 40 6.924802E-4 27.5 21 GTATCAA 115 1.2732926E-11 24.869566 1 TTTCTTC 45 0.0013770422 24.444445 26 GAGTACT 45 0.0013770422 24.444445 12 ATGGGGT 60 2.8126198E-4 22.0 5 ACTTTTT 50 0.0025416762 22.0 16 AGTACTT 50 0.0025416762 22.0 13 GTCTTCA 50 0.0025416762 22.0 13 TCTTCTC 50 0.0025416762 22.0 28 CTTTTTT 50 0.0025416762 22.0 17 >>END_MODULE