##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064047_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1173129 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.332192793801877 32.0 32.0 32.0 32.0 32.0 2 31.41944065827373 32.0 32.0 32.0 32.0 32.0 3 31.489103073916 32.0 32.0 32.0 32.0 32.0 4 31.568525712006096 32.0 32.0 32.0 32.0 32.0 5 31.522696139981196 32.0 32.0 32.0 32.0 32.0 6 35.10647422406232 36.0 36.0 36.0 36.0 36.0 7 35.1269860347839 36.0 36.0 36.0 36.0 36.0 8 35.07531055834439 36.0 36.0 36.0 36.0 36.0 9 35.18293043646521 36.0 36.0 36.0 36.0 36.0 10 35.042111310861806 36.0 36.0 36.0 36.0 36.0 11 35.17691916234276 36.0 36.0 36.0 36.0 36.0 12 35.082797373519874 36.0 36.0 36.0 36.0 36.0 13 35.13183545884553 36.0 36.0 36.0 36.0 36.0 14 35.07432856915139 36.0 36.0 36.0 36.0 36.0 15 35.0415137636185 36.0 36.0 36.0 36.0 36.0 16 35.05352949249401 36.0 36.0 36.0 36.0 36.0 17 35.0191283311554 36.0 36.0 36.0 36.0 36.0 18 35.01926812822801 36.0 36.0 36.0 36.0 36.0 19 35.011235763500856 36.0 36.0 36.0 36.0 36.0 20 35.00485112890398 36.0 36.0 36.0 36.0 36.0 21 35.00233563401808 36.0 36.0 36.0 36.0 36.0 22 34.98284076175766 36.0 36.0 36.0 36.0 36.0 23 34.938724556293465 36.0 36.0 36.0 36.0 36.0 24 34.91030739159973 36.0 36.0 36.0 32.0 36.0 25 34.878427692095244 36.0 36.0 36.0 32.0 36.0 26 34.82241168703527 36.0 36.0 36.0 32.0 36.0 27 34.81219115715322 36.0 36.0 36.0 32.0 36.0 28 34.78366147286445 36.0 36.0 36.0 32.0 36.0 29 34.75452571712062 36.0 36.0 36.0 32.0 36.0 30 34.736525139179065 36.0 36.0 36.0 32.0 36.0 31 34.727448558513174 36.0 36.0 36.0 32.0 36.0 32 34.6861010170237 36.0 36.0 36.0 32.0 36.0 33 34.66765121312319 36.0 36.0 36.0 32.0 36.0 34 34.665646318520814 36.0 36.0 36.0 32.0 36.0 35 34.622673209851605 36.0 36.0 36.0 32.0 36.0 36 34.59250176238078 36.0 36.0 36.0 32.0 36.0 37 34.577861428709035 36.0 36.0 36.0 32.0 36.0 38 34.528868521705625 36.0 36.0 36.0 32.0 36.0 39 34.51681784356196 36.0 36.0 36.0 32.0 36.0 40 34.5030734045446 36.0 36.0 36.0 32.0 36.0 41 34.48825576726856 36.0 36.0 36.0 32.0 36.0 42 34.41391611664191 36.0 36.0 36.0 32.0 36.0 43 34.41323162243879 36.0 36.0 36.0 32.0 36.0 44 34.34561246035176 36.0 36.0 36.0 32.0 36.0 45 34.317102381750004 36.0 36.0 36.0 32.0 36.0 46 34.27459725230558 36.0 36.0 36.0 32.0 36.0 47 34.24631221289389 36.0 36.0 36.0 32.0 36.0 48 34.208172332284 36.0 36.0 36.0 32.0 36.0 49 34.177502218426106 36.0 36.0 36.0 32.0 36.0 50 33.58908866799815 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 0.0 19 3.0 20 9.0 21 36.0 22 110.0 23 312.0 24 890.0 25 2123.0 26 4482.0 27 8088.0 28 13455.0 29 20523.0 30 29875.0 31 42519.0 32 60574.0 33 97222.0 34 200475.0 35 692430.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.46641478036105 18.2625812435636 11.903247696536107 26.36775627953924 2 15.974925114608322 20.636743197235422 37.309376827382565 26.078954860773695 3 18.327954541967358 24.412381960676004 28.88419487761758 28.37546861973906 4 12.388577897230398 16.048874420460155 36.010362031797015 35.552185650512435 5 14.206366051815273 37.12439126472877 33.46852733160633 15.200715351849626 6 34.0072302487284 35.98629986352714 16.655997176776257 13.350472710968205 7 29.880686608207625 30.551286346173352 21.039288944353093 18.528738101265933 8 27.6905608846086 33.667056223143405 19.412187406500053 19.230195485747945 9 27.586392080544808 13.81361184065276 18.48239424913755 40.117601829664885 10 15.81916954858024 27.046996857101696 31.84172817637737 25.29210541794069 11 37.41310631652615 20.83862899987981 22.70108402400759 19.047180659586456 12 24.859179901937384 23.576199698583615 29.132967587509633 22.431652811969368 13 29.833034841307658 19.600569081227054 25.24569118733905 25.32070489012624 14 23.36428761396881 19.842762256122093 25.233563600902887 31.55938652900621 15 24.88167940232754 27.91283488650429 22.124673083939427 25.080812627228738 16 25.30913343755701 25.75265233335436 24.316991129622085 24.621223099466548 17 23.86540610623384 26.037630985168725 25.441191889383006 24.655771019214427 18 24.59068656909804 24.902248101861442 26.74272007283124 23.76434525620928 19 25.68933169327499 24.66250514649284 25.427808876943626 24.22035428328854 20 25.891235245529227 24.520359827093415 25.151156873258383 24.437248054118974 21 26.733291905664252 24.076806557505613 24.550156035695988 24.639745501134147 22 25.872327439678262 24.59394813515343 25.124070219226237 24.409654205942072 23 24.319442443605467 24.504504658095215 25.725864128021115 25.45018877027821 24 25.08505061267981 24.78789557805008 25.549025039957378 24.57802876931273 25 24.752815377231993 24.705420032716425 25.69253889870609 24.84922569134549 26 24.30421054067325 25.444309564078782 26.13788259043047 24.113597304817503 27 24.936704112826092 24.958271600307572 25.266609949005254 24.838414337861085 28 24.341242149931933 24.923470627297906 25.834236227909628 24.901050994860533 29 24.56585116358367 24.788168101611117 25.482226579149263 25.163754155655955 30 24.301649070612957 25.046522630499922 25.813730462839434 24.838097836047687 31 25.180981511413002 24.61595774426963 25.02020377682755 25.18285696748982 32 24.798801118069925 24.97559869507362 24.921894513052248 25.303705673804206 33 24.306441163433014 24.768984212500424 25.657414669076278 25.26715995499028 34 25.07503654861712 24.77812964849394 25.80413351007378 24.34270029281516 35 25.44913165748442 24.78772002656217 25.612289520815413 24.150858795137996 36 24.376302699384933 25.43662007851361 25.352906324991796 24.834170897109658 37 25.272340255039545 24.95837854933154 24.941670296733452 24.827610898895465 38 24.672132824568045 25.09113104798148 25.41627025939528 24.8204658680552 39 25.39584033061853 24.622146599447266 24.912068633351346 25.06994443658286 40 25.662094150862337 24.849031963283483 25.439776454782898 24.049097431071285 41 24.79306717495563 24.93090873132916 25.839708256683654 24.436315837031554 42 25.492920527486767 25.5606038649402 25.23770149431852 23.70877411325451 43 24.873861471381748 24.91008980364244 25.443797070193458 24.772251654782355 44 24.482614588572257 25.322859748872656 24.992200219928225 25.202325442626865 45 24.571885476967616 25.475723057277712 25.10133329468958 24.851058171065095 46 24.582011357766227 24.929631972231267 25.13242487115533 25.355931798847177 47 24.98885430811892 24.902246101991395 25.377653548421748 24.73124604146794 48 25.38080499050811 25.36929708884185 24.57260931867255 24.677288601977484 49 24.881065530101225 25.31119872136388 24.811848694725626 24.99588705380927 50 24.650609701521166 25.922948730516616 24.53698060292469 24.88946096503753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 29.0 1 31.5 2 34.0 3 80.5 4 127.0 5 156.0 6 185.0 7 182.0 8 179.0 9 257.0 10 335.0 11 507.5 12 680.0 13 1244.5 14 1809.0 15 2431.0 16 3053.0 17 3235.5 18 3418.0 19 3415.0 20 3412.0 21 3737.0 22 4062.0 23 4694.5 24 5327.0 25 6247.0 26 7167.0 27 9258.0 28 11349.0 29 13377.5 30 15406.0 31 18072.0 32 20738.0 33 24466.0 34 28194.0 35 32728.5 36 37263.0 37 42116.5 38 46970.0 39 49635.5 40 52301.0 41 55920.0 42 59539.0 43 61002.0 44 62465.0 45 68438.0 46 74411.0 47 78714.0 48 83017.0 49 86402.5 50 89788.0 51 87910.0 52 86032.0 53 85449.0 54 84866.0 55 84828.0 56 84790.0 57 82014.5 58 79239.0 59 71784.5 60 64330.0 61 56560.5 62 48791.0 63 42339.5 64 35888.0 65 30426.5 66 24965.0 67 21073.0 68 17181.0 69 15462.5 70 13744.0 71 10619.5 72 7495.0 73 6452.0 74 5409.0 75 4345.0 76 3281.0 77 2802.0 78 2323.0 79 1892.0 80 1461.0 81 1185.0 82 909.0 83 755.0 84 601.0 85 432.0 86 263.0 87 183.5 88 104.0 89 89.5 90 75.0 91 59.5 92 44.0 93 35.5 94 27.0 95 27.5 96 28.0 97 18.5 98 9.0 99 12.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00963235927165725 2 2.557263523448828E-4 3 2.557263523448828E-4 4 0.0 5 0.0 6 1.7048423489658852E-4 7 0.0 8 0.0 9 0.0015343581140692967 10 6.819369395863541E-4 11 0.0 12 8.524211744829426E-5 13 8.524211744829425E-4 14 8.524211744829426E-5 15 0.003835895285173242 16 9.376632919312369E-4 17 0.0 18 5.114527046897655E-4 19 0.0 20 8.524211744829425E-4 21 0.0 22 2.557263523448828E-4 23 8.524211744829425E-4 24 3.4096846979317705E-4 25 0.0015343581140692967 26 0.006222674573725481 27 0.005711221869035716 28 0.004262105872414713 29 0.002472021406000534 30 0.0037506531677249477 31 0.006904611513311835 32 0.0030687162281385935 33 0.004176863754966419 34 0.002898231993242005 35 0.0027277477583454164 36 0.007160337865656718 37 0.004773558577104479 38 0.007927516922691367 39 0.004688316459656184 40 0.0028129898757937107 41 0.0036654110502766534 42 0.0016196002315175908 43 0.0011933896442761196 44 0.0016196002315175908 45 0.001704842348965885 46 9.376632919312369E-4 47 0.002557263523448828 48 0.0018753265838624739 49 3.4096846979317705E-4 50 0.0011933896442761196 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1173129.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.60729690849812 #Duplication Level Percentage of deduplicated Percentage of total 1 80.65666525824032 48.88382458955516 2 11.843953274087673 14.356599853060198 3 3.3643642208496014 6.117150637240791 4 1.3868549922972186 3.3621412914876165 5 0.7178850297196161 2.175453557119139 6 0.46164216879808534 1.678733039389714 7 0.31996570884242637 1.3574579701445697 8 0.21133076614495255 1.0246549191718015 9 0.16461254984815515 0.8979049515160878 >10 0.7469525240054229 8.042083790215262 >50 0.060789137121963904 2.5678743990409028 >100 0.05974598386010368 7.239164077397538 >500 0.004955230174581917 2.117621126815249 >1k 2.831560099761095E-4 0.17933579784609874 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.557263523448828E-4 2 0.0 0.0 0.0 0.0 2.557263523448828E-4 3 0.0 0.0 0.0 0.0 2.557263523448828E-4 4 0.0 0.0 0.0 8.524211744829426E-5 2.557263523448828E-4 5 0.0 0.0 0.0 8.524211744829426E-5 2.557263523448828E-4 6 8.524211744829426E-5 0.0 0.0 8.524211744829426E-5 2.557263523448828E-4 7 2.557263523448828E-4 0.0 0.0 8.524211744829426E-5 2.557263523448828E-4 8 2.557263523448828E-4 0.0 0.0 8.524211744829426E-5 2.557263523448828E-4 9 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 3.4096846979317705E-4 10 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 3.4096846979317705E-4 11 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 3.4096846979317705E-4 12 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 5.114527046897655E-4 13 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 5.114527046897655E-4 14 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 5.114527046897655E-4 15 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 6.819369395863541E-4 16 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 6.819369395863541E-4 17 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 6.819369395863541E-4 18 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 6.819369395863541E-4 19 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 6.819369395863541E-4 20 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 8.524211744829427E-4 21 2.557263523448828E-4 0.0 0.0 1.7048423489658852E-4 8.524211744829427E-4 22 3.4096846979317705E-4 0.0 0.0 5.114527046897655E-4 8.524211744829427E-4 23 3.4096846979317705E-4 0.0 0.0 7.671790570346484E-4 8.524211744829427E-4 24 3.4096846979317705E-4 0.0 0.0 0.001022905409379531 8.524211744829427E-4 25 3.4096846979317705E-4 0.0 0.0 0.001278631761724414 8.524211744829427E-4 26 3.4096846979317705E-4 0.0 0.0 0.0013638738791727082 9.376632919312369E-4 27 3.4096846979317705E-4 0.0 0.0 0.001960568701310768 9.376632919312369E-4 28 3.4096846979317705E-4 0.0 0.0 0.0037506531677249477 9.376632919312369E-4 29 3.4096846979317705E-4 0.0 0.0 0.008098001157587955 9.376632919312369E-4 30 3.4096846979317705E-4 0.0 0.0 0.01619600231517591 9.376632919312369E-4 31 3.4096846979317705E-4 0.0 0.0 0.033073941569938176 9.376632919312369E-4 32 3.4096846979317705E-4 0.0 0.0 0.052423902230700974 9.376632919312369E-4 33 3.4096846979317705E-4 0.0 0.0 0.07109192595187741 9.376632919312369E-4 34 3.4096846979317705E-4 0.0 0.0 0.09240245531395098 9.376632919312369E-4 35 3.4096846979317705E-4 0.0 0.0 0.1174636378437495 9.376632919312369E-4 36 3.4096846979317705E-4 0.0 0.0 0.15565210646058533 9.376632919312369E-4 37 3.4096846979317705E-4 0.0 0.0 0.20739407175169994 9.376632919312369E-4 38 3.4096846979317705E-4 0.0 0.0 0.2688536384319201 9.376632919312369E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 560 0.0 23.570835 4 GTATCAA 2155 0.0 22.259405 1 TTAGGAC 400 0.0 21.999445 3 AGGACGT 640 0.0 20.624481 5 GACGTGA 405 0.0 20.098259 7 GGACGTG 650 0.0 19.968727 6 GATATAC 245 0.0 19.758816 1 CTTTAGG 475 0.0 19.456287 1 GTAGGAC 780 0.0 19.179005 3 TGTAGGA 810 0.0 19.011866 2 TAAACGC 255 0.0 18.979914 28 TGGCGAG 790 0.0 18.657759 18 CTCTATA 95 1.5973905E-5 18.52585 2 GTAAACG 250 0.0 18.479534 27 AAACGCT 275 0.0 18.399536 29 TCCTACA 710 0.0 18.281229 2 GTATATA 145 6.2918843E-9 18.21032 1 CTGTAGG 835 0.0 17.919535 1 TAGAACA 420 0.0 17.809074 4 GTCCTAC 620 0.0 17.74527 1 >>END_MODULE