##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064046_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 597763 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.112479360549248 32.0 32.0 32.0 32.0 32.0 2 30.668028968002368 32.0 32.0 32.0 32.0 32.0 3 30.687785961994972 32.0 32.0 32.0 32.0 32.0 4 30.722891848441606 32.0 32.0 32.0 32.0 32.0 5 30.62278695737274 32.0 32.0 32.0 32.0 32.0 6 34.241970479939376 36.0 36.0 36.0 32.0 36.0 7 34.14943882441703 36.0 36.0 36.0 32.0 36.0 8 34.0990074661697 36.0 36.0 36.0 32.0 36.0 9 34.256123246169466 36.0 36.0 36.0 32.0 36.0 10 33.91065857204276 36.0 36.0 36.0 32.0 36.0 11 34.28706360212994 36.0 36.0 36.0 32.0 36.0 12 34.05806983704244 36.0 36.0 36.0 32.0 36.0 13 34.15456794749759 36.0 36.0 36.0 32.0 36.0 14 34.04469831689148 36.0 36.0 36.0 32.0 36.0 15 33.96949627193386 36.0 36.0 36.0 32.0 36.0 16 33.977506135374725 36.0 36.0 36.0 32.0 36.0 17 33.9039585922849 36.0 36.0 36.0 32.0 36.0 18 33.89183338547217 36.0 36.0 36.0 32.0 36.0 19 33.91375177118691 36.0 36.0 36.0 32.0 36.0 20 33.882682601633086 36.0 36.0 36.0 32.0 36.0 21 33.85622730078643 36.0 36.0 36.0 32.0 36.0 22 33.85141937523734 36.0 36.0 36.0 32.0 36.0 23 33.805427903700966 36.0 36.0 36.0 32.0 36.0 24 33.7975552183725 36.0 36.0 36.0 32.0 36.0 25 33.37894115226268 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 4.0 5 8.0 6 11.0 7 12.0 8 31.0 9 41.0 10 46.0 11 20.0 12 21.0 13 26.0 14 62.0 15 123.0 16 190.0 17 239.0 18 332.0 19 446.0 20 645.0 21 998.0 22 1602.0 23 2582.0 24 3818.0 25 5557.0 26 7800.0 27 10597.0 28 14028.0 29 18853.0 30 24329.0 31 32986.0 32 45364.0 33 62090.0 34 126552.0 35 238348.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.768775824760645 17.97110471820155 11.849642783626788 25.41047667341102 2 15.730972432738088 20.536924204250024 38.74975323636777 24.982350126644114 3 18.188661947915293 25.1789606813471 29.514501712234235 27.117875658503372 4 12.03010663463501 16.123846074058708 37.41614275055124 34.42990454075504 5 13.649702201699792 37.6880479154119 34.35672221106873 14.305527671819581 6 32.18933307456274 36.82461711432864 17.864038360509824 13.122011450598798 7 28.55644124969882 31.5305999518111 21.91473911064707 17.99821968784301 8 27.298772191997912 33.555455520617706 20.38208139980488 18.76369088757951 9 27.442267589180215 14.207913666656625 19.328098169366257 39.0217205747969 10 15.208829540262014 27.652904264631793 33.098055231492566 24.04021096361363 11 35.758604356114816 21.719649381798583 23.610155675954335 18.91159058613227 12 23.94573422827779 24.59601961736103 30.240865038581926 21.217381115779254 13 29.129109525411646 20.393423085485495 25.91865395205742 24.558813437045444 14 22.849280122130658 20.35644876990524 26.91293671000497 29.88133439795913 15 24.26891138893027 28.040058182451194 23.668842092224875 24.02218833639366 16 24.092769440654845 26.543241908619926 25.438445249792853 23.92554340093238 17 22.800034147574433 26.45951587443736 26.722150895453183 24.018299082535023 18 23.28760701932961 25.917177000010046 27.67502285199608 23.120193128664273 19 24.612330104076165 25.67502188830353 26.743572874239767 22.969075133380542 20 24.861798907784465 25.17637171489893 26.52121650444152 23.440612872875086 21 25.64243359705895 24.861636125610627 26.00420532428876 23.49172495304166 22 24.605365588247604 25.200351567404677 26.418114091993473 23.776168752354245 23 23.589595056362622 25.227986934385637 26.773292169839593 24.409125839412148 24 23.721481521164108 25.876062223353173 26.70039442052326 23.702061834959455 25 23.853043594723097 25.706488984129113 26.56214424429117 23.878323176856625 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 260.0 1 260.0 2 389.0 3 518.0 4 518.0 5 518.0 6 1414.5 7 2311.0 8 2311.0 9 2311.0 10 2286.0 11 2261.0 12 2261.0 13 2261.0 14 2287.5 15 2314.0 16 2314.0 17 2314.0 18 4025.5 19 5737.0 20 5737.0 21 5737.0 22 8940.0 23 12143.0 24 12143.0 25 12143.0 26 17379.0 27 22615.0 28 22615.0 29 22615.0 30 27853.5 31 33092.0 32 33092.0 33 33092.0 34 38615.5 35 44139.0 36 44139.0 37 44139.0 38 49028.5 39 53918.0 40 53918.0 41 53918.0 42 59792.0 43 65666.0 44 65666.0 45 65666.0 46 72319.5 47 78973.0 48 78973.0 49 78973.0 50 79071.0 51 79169.0 52 79169.0 53 79169.0 54 71429.0 55 63689.0 56 63689.0 57 63689.0 58 56753.0 59 49817.0 60 49817.0 61 49817.0 62 42923.0 63 36029.0 64 36029.0 65 36029.0 66 29281.5 67 22534.0 68 22534.0 69 22534.0 70 16808.0 71 11082.0 72 11082.0 73 11082.0 74 8356.0 75 5630.0 76 5630.0 77 5630.0 78 4460.0 79 3290.0 80 3290.0 81 3290.0 82 2243.5 83 1197.0 84 1197.0 85 1197.0 86 931.5 87 666.0 88 666.0 89 666.0 90 467.5 91 269.0 92 269.0 93 269.0 94 190.5 95 112.0 96 112.0 97 112.0 98 222.0 99 332.0 100 332.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.037807626099306914 2 0.004182259524259615 3 0.0010037422858223076 4 0.003513098000378076 5 0.007193486381726537 6 0.010873874763074998 7 0.019238393811594225 8 0.03245433390825461 9 0.044331950957151915 10 0.05252917962470076 11 0.05085627581499692 12 0.05570769686313807 13 0.056878729529930755 14 0.0618974409590423 15 0.05554040648216768 16 0.06156286019710153 17 0.059555375625456916 18 0.0737750580079396 19 0.06892363695979845 20 0.07444421953182113 21 0.07109841191241345 22 0.07327318686502844 23 0.07862647905608075 24 0.07210215419823575 25 0.07410963876988037 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 597763.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.41316456211259 #Duplication Level Percentage of deduplicated Percentage of total 1 80.79698279079453 51.23592365834833 2 12.650594404104487 16.04428449512037 3 3.2275466108579747 6.140068330986765 4 1.2001754634401083 3.044276966661493 5 0.5876958425994492 1.8633826589614149 6 0.32491993272950337 1.2362520698211932 7 0.21810676327388656 0.9681588050117693 8 0.14593512500169636 0.7403366477700035 9 0.11370008619766145 0.6489074049100823 >10 0.6085153689786934 7.448366544899542 >50 0.07390718742076106 3.2430536454912176 >100 0.049801223597101915 5.674920788746536 >500 0.0010596005020644115 0.5313256506168668 >1k 0.0010596005020644115 1.1807423326544282 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2262 0.3784108417550099 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1806 0.30212642803251455 No Hit TATCAACGCAGAGTACTTTTTTTTT 1781 0.29794416850825495 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1180 0.1974026495450538 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 984 0.16461373487485842 No Hit GTACATGGGGTGGTATCAACGCAAA 862 0.1442043083964715 No Hit GGTATCAACGCAGAGTACTTTTTTT 782 0.13082107791884073 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.6729038097038459E-4 0.0 8 0.0 0.0 0.0 5.018711429111537E-4 0.0 9 0.0 0.0 0.0 6.691615238815383E-4 0.0 10 0.0 0.0 0.0 6.691615238815383E-4 0.0 11 0.0 0.0 0.0 6.691615238815383E-4 0.0 12 0.0 0.0 0.0 0.0010037422858223074 0.0 13 0.0 0.0 0.0 0.0010037422858223074 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCTAC 25 0.0060253716 19.00134 1 CCGATCC 45 6.7501015E-4 14.77882 16 GCGTTAT 45 6.7501015E-4 14.77882 1 GGACTAT 40 0.0052716043 14.251004 1 ATCTTAC 40 0.0052716043 14.251004 1 GTGTTAG 55 1.9558049E-4 13.819155 1 TAGAGCG 50 0.0014978122 13.299825 5 GAGCGTG 60 4.0859322E-4 12.666498 7 GCTACAC 60 4.0859322E-4 12.666498 3 ATTACCG 130 1.9645086E-10 12.423952 15 TTACCGC 130 1.9645086E-10 12.423952 16 GTTCTGA 110 3.792229E-8 12.091761 1 GCTATAC 55 0.003063028 12.091761 1 TCTTGGA 110 3.814239E-8 12.086702 2 TTAGGAC 95 1.0363729E-6 11.999842 3 CGCAAGA 95 1.0405729E-6 11.995825 2 TACCGCG 135 3.6925485E-10 11.963806 17 AATCCTT 80 2.8598324E-5 11.874843 6 GACCGGC 65 8.011629E-4 11.692154 7 ATAGACA 65 8.011629E-4 11.692154 4 >>END_MODULE