##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064043_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1349441 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32927263955964 32.0 32.0 32.0 32.0 32.0 2 31.388741708603785 32.0 32.0 32.0 32.0 32.0 3 31.471791652988163 32.0 32.0 32.0 32.0 32.0 4 31.553391367240213 32.0 32.0 32.0 32.0 32.0 5 31.493341316886028 32.0 32.0 32.0 32.0 32.0 6 35.088519616641264 36.0 36.0 36.0 36.0 36.0 7 35.10591867299126 36.0 36.0 36.0 36.0 36.0 8 35.04945529296946 36.0 36.0 36.0 36.0 36.0 9 35.17287454583046 36.0 36.0 36.0 36.0 36.0 10 35.0133484902267 36.0 36.0 36.0 36.0 36.0 11 35.1626851414771 36.0 36.0 36.0 36.0 36.0 12 35.059723248367284 36.0 36.0 36.0 36.0 36.0 13 35.107047288469815 36.0 36.0 36.0 36.0 36.0 14 35.04896694260809 36.0 36.0 36.0 36.0 36.0 15 35.01425997876158 36.0 36.0 36.0 36.0 36.0 16 35.02978640785333 36.0 36.0 36.0 36.0 36.0 17 34.988438916558785 36.0 36.0 36.0 36.0 36.0 18 34.98877461111675 36.0 36.0 36.0 36.0 36.0 19 34.98984542488334 36.0 36.0 36.0 36.0 36.0 20 34.98702796194869 36.0 36.0 36.0 36.0 36.0 21 34.981627948165205 36.0 36.0 36.0 36.0 36.0 22 34.96070521052791 36.0 36.0 36.0 36.0 36.0 23 34.91282538473338 36.0 36.0 36.0 32.0 36.0 24 34.88052978974257 36.0 36.0 36.0 32.0 36.0 25 34.85135622824562 36.0 36.0 36.0 32.0 36.0 26 34.78961214310222 36.0 36.0 36.0 32.0 36.0 27 34.78644638780058 36.0 36.0 36.0 32.0 36.0 28 34.756600696140104 36.0 36.0 36.0 32.0 36.0 29 34.72337434537709 36.0 36.0 36.0 32.0 36.0 30 34.723008267867954 36.0 36.0 36.0 32.0 36.0 31 34.71280626570558 36.0 36.0 36.0 32.0 36.0 32 34.6709748703352 36.0 36.0 36.0 32.0 36.0 33 34.650404130302846 36.0 36.0 36.0 32.0 36.0 34 34.64798831516161 36.0 36.0 36.0 32.0 36.0 35 34.60040787259317 36.0 36.0 36.0 32.0 36.0 36 34.58192466361997 36.0 36.0 36.0 32.0 36.0 37 34.57482913295209 36.0 36.0 36.0 32.0 36.0 38 34.52596890119687 36.0 36.0 36.0 32.0 36.0 39 34.528981259647516 36.0 36.0 36.0 32.0 36.0 40 34.51242032812105 36.0 36.0 36.0 32.0 36.0 41 34.49721032634995 36.0 36.0 36.0 32.0 36.0 42 34.43659263354233 36.0 36.0 36.0 32.0 36.0 43 34.42589338844751 36.0 36.0 36.0 32.0 36.0 44 34.37159534948175 36.0 36.0 36.0 32.0 36.0 45 34.34252553464731 36.0 36.0 36.0 32.0 36.0 46 34.31945820528649 36.0 36.0 36.0 32.0 36.0 47 34.293880206693 36.0 36.0 36.0 32.0 36.0 48 34.26270952194279 36.0 36.0 36.0 32.0 36.0 49 34.2400638486603 36.0 36.0 36.0 32.0 36.0 50 33.62925833734116 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 2.0 20 7.0 21 37.0 22 134.0 23 398.0 24 1087.0 25 2435.0 26 4912.0 27 8995.0 28 14918.0 29 23297.0 30 34085.0 31 48589.0 32 70735.0 33 115399.0 34 241110.0 35 783298.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.60280439632108 17.931238929526945 11.738666429508415 26.72729024464356 2 16.269401638463503 20.29026963136424 36.518617050839794 26.92171167933246 3 18.214740929570787 24.048864714251838 28.734808513161013 29.001585843016365 4 12.51933207898678 15.939414913286315 35.57495288789951 35.966300119827395 5 14.590115462624894 36.52623567832903 33.31838887361507 15.565259985431004 6 34.673172076437574 35.4915850340993 16.364331601011084 13.470911288452033 7 30.410911192791083 30.30212532606118 20.795515176665877 18.491448304481857 8 28.346255968212024 32.947642764670704 19.091312625005465 19.614788642111808 9 27.604268175650592 13.915960009752274 18.042297890441066 40.43747392415607 10 16.043034370732006 26.53151360608493 31.357244116603045 26.06820790658002 11 37.93343905620109 20.642711050509842 22.105465971069478 19.31838392221959 12 24.941160777804125 23.370583353094617 28.486557386767846 23.201698482333413 13 29.850567089189177 19.07353818449944 24.99075539021887 26.08513933609251 14 23.871881384607065 19.216754839240366 24.67836586665402 32.23299790949856 15 25.38819823992589 26.985085687818433 21.730060213061602 25.896655859194073 16 26.11691768660499 25.400910608050225 23.32076998550497 25.161401719839816 17 24.583438623844987 25.624239963066188 24.63709046931285 25.15523094377598 18 25.379861275788475 24.655634930045057 25.578980910599952 24.385522883566516 19 26.10555037233936 24.637164574071782 24.7134924757733 24.543792577815555 20 26.12708615705434 24.07273880620795 24.361304875906956 25.438870160830753 21 27.13990459753335 23.981856190822718 23.93190958330153 24.946329628342404 22 26.33731498793202 24.023019936432842 24.40755010044915 25.232114975185986 23 24.952850427847633 23.750564127493927 25.084683966329465 26.21190147832898 24 25.352424751952114 24.472576341096325 24.685405839620522 25.48959306733104 25 25.378492019617116 24.13315508576188 24.8343379520599 25.654014942561105 26 25.17387731024307 24.89263516112322 24.959555229807073 24.973932298826636 27 25.782266090896496 24.37436128120968 24.369247825484425 25.474124802409403 28 25.079609751036575 24.360176227124008 25.11169820549209 25.448515816347328 29 25.167701182134007 24.461770355351618 24.958871340660906 25.41165712185347 30 24.91320222824794 24.62136903707645 25.225563046121945 25.239865688553664 31 25.713845289610454 24.29426974677381 24.249507354298043 25.74237760931769 32 25.465352903425654 24.462837722672052 24.20050007188348 25.871309302018812 33 25.04157427937916 24.180371604396647 24.758113283612175 26.019940832612022 34 25.758438082195433 24.177015572639462 24.928228317689552 25.136318027475546 35 26.121728484904178 24.096551611700793 24.86355178140421 24.91816812199082 36 25.07044132360025 24.704932004298367 24.572349649831402 25.65227702226998 37 25.984654011240483 24.372613768408073 24.41596611254713 25.22676610780431 38 25.190669408778465 24.265540177496156 24.930168788097752 25.61362162562763 39 25.889676484646824 24.161642810296467 24.328902952804775 25.619777752251938 40 26.09860732036819 24.23913212633938 24.748612915393583 24.91364763789885 41 25.053134726545128 24.680302356602933 25.080257892396617 25.186305024455315 42 26.203128902142332 24.833650630382408 24.56220047294428 24.40101999453098 43 25.499267466858157 23.915780549818553 24.91739086293664 25.66756112038665 44 25.17776089816033 24.573355318005817 24.50836467384256 25.740519109991293 45 25.266909980176745 24.755729292105897 24.52318580135984 25.45417492635752 46 25.06550923798824 24.446876750741794 24.776646104868135 25.710967906401823 47 25.32923282138689 24.35415084202531 24.995238712785074 25.321377623802732 48 25.975233804152897 24.921818262660995 24.118510174741743 24.98443775844437 49 25.175239748132 24.98353016850731 24.27167774412588 25.569552339234807 50 25.35839179624597 25.07271583356244 24.255186074723344 25.313706295468236 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 21.5 2 24.0 3 65.0 4 106.0 5 138.5 6 171.0 7 157.5 8 144.0 9 187.5 10 231.0 11 379.0 12 527.0 13 1010.5 14 1494.0 15 1921.0 16 2348.0 17 2431.5 18 2515.0 19 2554.0 20 2593.0 21 2991.0 22 3389.0 23 3975.0 24 4561.0 25 5702.0 26 6843.0 27 8590.5 28 10338.0 29 12108.5 30 13879.0 31 15996.0 32 18113.0 33 21444.5 34 24776.0 35 29159.5 36 33543.0 37 39630.0 38 45717.0 39 50462.5 40 55208.0 41 60800.0 42 66392.0 43 69522.5 44 72653.0 45 79799.0 46 86945.0 47 93556.0 48 100167.0 49 104142.0 50 108117.0 51 105274.5 52 102432.0 53 100829.5 54 99227.0 55 100227.5 56 101228.0 57 98300.5 58 95373.0 59 87604.0 60 79835.0 61 70247.0 62 60659.0 63 52859.5 64 45060.0 65 38443.5 66 31827.0 67 27532.0 68 23237.0 69 20902.5 70 18568.0 71 14634.5 72 10701.0 73 9039.0 74 7377.0 75 5913.5 76 4450.0 77 3948.5 78 3447.0 79 2826.5 80 2206.0 81 1770.0 82 1334.0 83 1107.0 84 880.0 85 646.0 86 412.0 87 281.5 88 151.0 89 118.5 90 86.0 91 68.0 92 50.0 93 39.0 94 28.0 95 29.0 96 30.0 97 23.0 98 16.0 99 15.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009707723420290328 2 4.4462855360108373E-4 3 7.410475893351395E-5 4 0.0 5 0.0 6 0.0 7 7.410475893351395E-5 8 0.0 9 8.892571072021675E-4 10 5.928380714681116E-4 11 7.410475893351395E-5 12 7.410475893351395E-5 13 4.4462855360108373E-4 14 2.964190357340558E-4 15 0.004890914089611921 16 9.633618661356813E-4 17 0.0 18 7.410475893351395E-5 19 0.0 20 7.410475893351395E-4 21 0.0 22 1.482095178670279E-4 23 8.892571072021675E-4 24 2.964190357340558E-4 25 5.187333125345977E-4 26 0.005187333125345976 27 0.004446285536010837 28 0.0034088189109416417 29 0.0012597809018697372 30 0.002964190357340558 31 0.006965847339750311 32 0.002593666562672988 33 0.0036311331877421837 34 0.0017044094554708208 35 0.0020749332501383906 36 0.006743533062949769 37 0.0024454570448059604 38 0.008596152036287618 39 0.0034088189109416417 40 0.0020749332501383906 41 0.0030382951162740723 42 0.0016303046965373067 43 0.0010374666250691953 44 0.0011856761429362233 45 0.0011856761429362233 46 9.633618661356813E-4 47 0.0011856761429362233 48 0.001556199937603793 49 2.964190357340558E-4 50 7.410475893351395E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1349441.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.34921452508727 #Duplication Level Percentage of deduplicated Percentage of total 1 81.57394845050871 49.2292371469816 2 11.33564408165292 13.681944329274156 3 3.126093860567841 5.659719270509008 4 1.3256420077917241 3.200058156467607 5 0.7048424618752295 2.1268344469049434 6 0.4465060433738282 1.616777339898905 7 0.2783571182588567 1.175904341107218 8 0.19695767062352368 0.9508992573456408 9 0.14129507149465254 0.7674341922871496 >10 0.7480389487483836 8.078186736236495 >50 0.055344137847037074 2.303111641295619 >100 0.05905289758324691 7.345131322835305 >500 0.006794757195148771 2.769980821729097 >1k 0.00148249247894155 1.094780997127286 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1408 0.10433950057838763 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1398 0.10359845298905251 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 7.410475893351395E-5 13 0.0 0.0 0.0 0.0 7.410475893351395E-5 14 0.0 0.0 0.0 7.410475893351395E-5 2.2231427680054186E-4 15 0.0 0.0 0.0 7.410475893351395E-5 2.964190357340558E-4 16 0.0 0.0 0.0 1.482095178670279E-4 2.964190357340558E-4 17 0.0 0.0 0.0 1.482095178670279E-4 2.964190357340558E-4 18 0.0 0.0 0.0 1.482095178670279E-4 3.7052379466756975E-4 19 0.0 0.0 0.0 1.482095178670279E-4 3.7052379466756975E-4 20 0.0 0.0 0.0 2.2231427680054186E-4 4.4462855360108373E-4 21 0.0 0.0 0.0 2.2231427680054186E-4 4.4462855360108373E-4 22 0.0 0.0 0.0 2.2231427680054186E-4 4.4462855360108373E-4 23 0.0 0.0 0.0 4.4462855360108373E-4 5.187333125345977E-4 24 0.0 0.0 0.0 7.410475893351395E-4 5.187333125345977E-4 25 0.0 0.0 0.0 0.0011115713840027092 5.187333125345977E-4 26 0.0 0.0 0.0 0.001482095178670279 6.669428304016255E-4 27 0.0 0.0 0.0 0.0020749332501383906 6.669428304016255E-4 28 0.0 0.0 0.0 0.0036311331877421837 6.669428304016255E-4 29 0.0 0.0 0.0 0.009855932938157355 6.669428304016255E-4 30 0.0 0.0 0.0 0.02030470394778282 6.669428304016255E-4 31 0.0 0.0 0.0 0.0403870936187651 6.669428304016255E-4 32 0.0 0.0 0.0 0.06291494033455335 7.410475893351395E-4 33 0.0 0.0 0.0 0.0834419585591367 7.410475893351395E-4 34 0.0 0.0 0.0 0.10915630990906605 7.410475893351395E-4 35 0.0 0.0 0.0 0.13524118505366295 7.410475893351395E-4 36 0.0 0.0 0.0 0.17496133584202644 7.410475893351395E-4 37 0.0 0.0 0.0 0.22668645757761918 7.410475893351395E-4 38 0.0 0.0 0.0 0.30360719735060665 7.410475893351395E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1540 0.0 26.71388 1 TAGATCG 45 0.0013984215 24.444075 5 GGACCGT 85 6.115102E-6 20.705568 6 TAGGACG 300 0.0 19.066376 4 GGTATCA 725 0.0 18.813507 1 CGCAATA 345 0.0 18.494528 36 GTATAGA 180 1.4551915E-11 18.333055 1 AGCGAAA 540 0.0 17.110216 17 AACGCAG 2395 0.0 17.085335 6 GTATTAC 105 3.775357E-5 16.761652 1 GTCTAGC 105 3.775357E-5 16.761652 1 ATCAACG 2440 0.0 16.589912 3 ACGGACC 625 0.0 16.543749 8 CAACGCA 2465 0.0 16.510906 5 GTCTAGT 80 0.0019887132 16.49975 1 GTATAGT 120 6.408567E-6 16.49975 1 TCAACGC 2465 0.0 16.421658 4 TAAGACT 215 1.2732926E-11 16.371845 4 CAATACG 365 0.0 16.274933 38 ATACGAA 395 0.0 16.151655 40 >>END_MODULE