##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064041_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 842892 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22279248112451 32.0 32.0 32.0 32.0 32.0 2 31.340257114790507 32.0 32.0 32.0 32.0 32.0 3 31.43499048513926 32.0 32.0 32.0 32.0 32.0 4 31.530690764653123 32.0 32.0 32.0 32.0 32.0 5 31.46339270036968 32.0 32.0 32.0 32.0 32.0 6 35.03904296161311 36.0 36.0 36.0 36.0 36.0 7 35.07381016785069 36.0 36.0 36.0 36.0 36.0 8 35.007537145921425 36.0 36.0 36.0 36.0 36.0 9 35.13629504135761 36.0 36.0 36.0 36.0 36.0 10 34.9770812868078 36.0 36.0 36.0 36.0 36.0 11 35.14165041310156 36.0 36.0 36.0 36.0 36.0 12 35.04813902611485 36.0 36.0 36.0 36.0 36.0 13 35.08001262320677 36.0 36.0 36.0 36.0 36.0 14 35.03070381496087 36.0 36.0 36.0 36.0 36.0 15 35.00387831418497 36.0 36.0 36.0 36.0 36.0 16 35.01713861325057 36.0 36.0 36.0 36.0 36.0 17 34.98307375084827 36.0 36.0 36.0 36.0 36.0 18 34.96591022337381 36.0 36.0 36.0 36.0 36.0 19 34.969825315698806 36.0 36.0 36.0 36.0 36.0 20 34.96185039127195 36.0 36.0 36.0 36.0 36.0 21 34.95534066048794 36.0 36.0 36.0 36.0 36.0 22 34.93109793425492 36.0 36.0 36.0 36.0 36.0 23 34.88213911153505 36.0 36.0 36.0 32.0 36.0 24 34.85681795532524 36.0 36.0 36.0 32.0 36.0 25 34.8271261324108 36.0 36.0 36.0 32.0 36.0 26 34.775316410643356 36.0 36.0 36.0 32.0 36.0 27 34.75964655021047 36.0 36.0 36.0 32.0 36.0 28 34.728094465245846 36.0 36.0 36.0 32.0 36.0 29 34.69314336830816 36.0 36.0 36.0 32.0 36.0 30 34.67364858131291 36.0 36.0 36.0 32.0 36.0 31 34.65429853409452 36.0 36.0 36.0 32.0 36.0 32 34.613315822193115 36.0 36.0 36.0 32.0 36.0 33 34.59744190240268 36.0 36.0 36.0 32.0 36.0 34 34.56695282432388 36.0 36.0 36.0 32.0 36.0 35 34.528014265172764 36.0 36.0 36.0 32.0 36.0 36 34.49479174081614 36.0 36.0 36.0 32.0 36.0 37 34.459260498379386 36.0 36.0 36.0 32.0 36.0 38 34.40787787759286 36.0 36.0 36.0 32.0 36.0 39 34.381789126009025 36.0 36.0 36.0 32.0 36.0 40 34.371918347783584 36.0 36.0 36.0 32.0 36.0 41 34.34846101279879 36.0 36.0 36.0 32.0 36.0 42 34.26800705191175 36.0 36.0 36.0 32.0 36.0 43 34.26864888977473 36.0 36.0 36.0 32.0 36.0 44 34.20364412048044 36.0 36.0 36.0 32.0 36.0 45 34.13320923677055 36.0 36.0 36.0 32.0 36.0 46 34.095843832899114 36.0 36.0 36.0 32.0 36.0 47 34.05681985355182 36.0 36.0 36.0 32.0 36.0 48 33.996322185997734 36.0 36.0 36.0 32.0 36.0 49 33.96515805109077 36.0 36.0 36.0 32.0 36.0 50 33.37206901951851 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 10.0 21 20.0 22 92.0 23 275.0 24 676.0 25 1720.0 26 3484.0 27 6401.0 28 10569.0 29 15979.0 30 22957.0 31 32422.0 32 47083.0 33 75351.0 34 154440.0 35 471411.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.77553211811426 18.198267464473055 11.986910469844366 26.039289947568317 2 15.057024115868161 20.60117049813202 38.80036398624255 25.541441399757264 3 18.392576009415237 25.146608865461527 29.192574585740232 27.268240539383005 4 11.807918452186044 16.360458991187482 36.85122174608372 34.98040081054275 5 13.32424557357289 38.19113243452305 34.08087868908472 14.403743302819342 6 33.31387651086972 36.60635051702947 17.104326532936604 12.975446439164212 7 29.05879882452179 31.153019785476417 21.251264991558813 18.53691639844298 8 27.624654166844625 34.59470489695002 19.424196694238407 18.356444241966944 9 27.576404707668946 13.616410402429766 18.47582099468489 40.3313638952164 10 15.25312528547853 28.05941038080018 32.84963630776751 23.83782802595378 11 36.95135319827451 21.00174162288882 23.043165672470494 19.003739506366177 12 24.277250228973582 23.829743312310477 30.542584340579815 21.35042211813613 13 30.447698863905998 20.344577215478214 25.237516728201136 23.970207192414648 14 22.81448350318547 20.107250056353735 26.40344528942092 30.67482115103988 15 24.6969812019192 28.629700113424423 22.938902678050237 23.734416006606143 16 24.44710725662457 26.172728189492044 25.593289713306085 23.7868748405773 17 22.790701537088975 26.47005784845508 26.57671445452086 24.16252615993508 18 23.35853627574621 25.831216610451413 27.853423515021515 22.95682359878086 19 25.303716253090553 25.081979660502174 25.81872885256949 23.795575233837788 20 25.41850460681329 25.289186386706564 26.140907030877397 23.151401975602752 21 25.907826862753474 24.49803770827105 25.423660445229046 24.170474983746434 22 25.02948190155299 25.44175396552338 25.901600446084306 23.627163686839324 23 24.086089627459845 25.29123051789737 26.113402832401416 24.509277022241363 24 24.57752394149638 25.627366862501304 26.085790757490912 23.709318438511403 25 24.474094146372135 25.35002058421197 26.259522422554127 23.91636284686177 26 23.561836265205617 26.115632077810986 26.796051078289118 23.526480578694283 27 23.984571321451366 25.722018019899245 26.430095177529466 23.86331548111992 28 23.489980661311947 26.158245043719674 26.146618102435724 24.205156192532655 29 23.797213350480973 25.512412264674754 25.99896070121821 24.691413683626063 30 23.56904553996849 26.00407657700412 26.385514151749273 24.041363731278118 31 24.514527685595944 25.566329987103114 25.53453269248338 24.384609634817565 32 23.732847376950765 26.040309702280528 25.847754231356053 24.379088689412654 33 23.72277885545135 25.6652014260884 26.550871135947034 24.061148582513216 34 24.256236979104877 25.86821786360034 26.627404268243488 23.248140889051296 35 24.155121827369012 26.02776456239552 26.396028820474733 23.421084789760734 36 23.632858151358214 26.276673370232608 26.137381575278674 23.953086903130504 37 24.172026324312974 26.06069018865283 25.524309176611844 24.242974310422355 38 24.072013155428156 26.403874491900066 25.64798314282799 23.876129209843793 39 24.51590246032245 25.431478886691337 25.923258631060786 24.12936002192543 40 25.054011567551537 25.660744475752633 26.006110040041523 23.279133916654306 41 24.001808099431234 25.743824106568713 26.739346569000823 23.51502122499923 42 24.454845292331058 26.678886674259683 25.818147304479876 23.048120728929387 43 23.71948116044851 25.95526533401512 26.222681493591622 24.102572011944748 44 23.539838127575972 26.347097946816056 25.72091599575743 24.392147929850537 45 23.61837125481384 26.627214722820035 25.631464427998225 24.122949594367896 46 23.914977826182902 25.847030322012703 25.45373870250544 24.78425314929896 47 24.380906054799883 25.836739294209764 25.81467222693487 23.967682424055475 48 24.099986237596042 26.164584114389307 25.22577460978839 24.509655038226263 49 24.126697133203304 26.250575399932615 25.675531384803747 23.947196082060334 50 23.770649342020967 26.903939332102638 25.1418937837235 24.183517542152895 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 19.5 2 16.0 3 56.5 4 97.0 5 115.0 6 133.0 7 153.5 8 174.0 9 230.0 10 286.0 11 467.0 12 648.0 13 1121.5 14 1595.0 15 2177.0 16 2759.0 17 3067.5 18 3376.0 19 3569.5 20 3763.0 21 4080.5 22 4398.0 23 5006.5 24 5615.0 25 6148.5 26 6682.0 27 8558.0 28 10434.0 29 12606.0 30 14778.0 31 17107.5 32 19437.0 33 23075.0 34 26713.0 35 30890.0 36 35067.0 37 37352.0 38 39637.0 39 40738.5 40 41840.0 41 44159.0 42 46478.0 43 47112.5 44 47747.0 45 50747.0 46 53747.0 47 56148.0 48 58549.0 49 59406.5 50 60264.0 51 58746.0 52 57228.0 53 55994.5 54 54761.0 55 53838.5 56 52916.0 57 50455.0 58 47994.0 59 44084.0 60 40174.0 61 35226.5 62 30279.0 63 26424.5 64 22570.0 65 19441.5 66 16313.0 67 14222.5 68 12132.0 69 10846.0 70 9560.0 71 7524.5 72 5489.0 73 4520.0 74 3551.0 75 2842.0 76 2133.0 77 1772.0 78 1411.0 79 1160.5 80 910.0 81 718.5 82 527.0 83 424.5 84 322.0 85 245.0 86 168.0 87 125.5 88 83.0 89 60.0 90 37.0 91 32.0 92 27.0 93 25.0 94 23.0 95 19.5 96 16.0 97 11.5 98 7.0 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009609772070443189 2 3.559174840904885E-4 3 3.559174840904885E-4 4 0.0 5 0.0 6 0.0 7 1.1863916136349615E-4 8 0.0 9 0.001423669936361954 10 0.0010677524522714652 11 0.0 12 0.0 13 4.745566454539846E-4 14 2.372783227269923E-4 15 0.0047455664545398455 16 8.30474129544473E-4 17 0.0 18 1.1863916136349615E-4 19 0.0 20 0.0011863916136349614 21 0.0 22 2.372783227269923E-4 23 3.559174840904885E-4 24 4.745566454539846E-4 25 0.0015423090977254499 26 0.0034405356795413886 27 0.0054574014227208225 28 0.002610061549996915 29 0.0018982265818159383 30 0.003321896518177892 31 0.006287875552265296 32 0.0021355049045429304 33 0.0032032573568143963 34 0.0018982265818159383 35 0.0022541440659064266 36 0.006762432197719281 37 0.002491422388633419 38 0.0054574014227208225 39 0.004152370647722365 40 0.0020168657431794343 41 0.0021355049045429304 42 0.001423669936361954 43 0.0013050307749984575 44 7.11834968180977E-4 45 0.0011863916136349614 46 7.11834968180977E-4 47 8.30474129544473E-4 48 0.0018982265818159383 49 0.0 50 9.491132909079692E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 842892.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.778478921851566 #Duplication Level Percentage of deduplicated Percentage of total 1 78.22781290540362 49.892509164898335 2 13.72800764691674 17.511028926957927 3 4.139702570542672 7.920717994142719 4 1.6589948457034667 4.2323267119263575 5 0.7386994827674996 2.3556564695634816 6 0.3948464623556777 1.5109624066031548 7 0.21162103827667178 0.9447807550404338 8 0.15154587874239617 0.773229250645231 9 0.11103708522648222 0.6373598759694928 >10 0.5343259124385291 6.3900353739374625 >50 0.06320486002588856 2.8379555161493677 >100 0.03964036307261793 4.7529005966558 >500 5.609485277568859E-4 0.24053695751028933 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 857 0.10167376128851621 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.1863916136349616E-4 0.0 10 0.0 0.0 0.0 1.1863916136349616E-4 0.0 11 0.0 0.0 0.0 1.1863916136349616E-4 0.0 12 0.0 0.0 0.0 1.1863916136349616E-4 0.0 13 0.0 0.0 0.0 1.1863916136349616E-4 0.0 14 0.0 0.0 0.0 1.1863916136349616E-4 0.0 15 0.0 0.0 0.0 1.1863916136349616E-4 0.0 16 0.0 0.0 0.0 1.1863916136349616E-4 0.0 17 0.0 0.0 0.0 2.3727832272699232E-4 0.0 18 0.0 0.0 0.0 2.3727832272699232E-4 0.0 19 0.0 0.0 0.0 2.3727832272699232E-4 0.0 20 0.0 0.0 0.0 3.559174840904885E-4 0.0 21 0.0 0.0 0.0 5.931958068174808E-4 0.0 22 0.0 0.0 0.0 0.00154230909772545 0.0 23 0.0 0.0 0.0 0.0026100615499969155 0.0 24 1.1863916136349616E-4 0.0 0.0 0.003796453163631877 0.0 25 1.1863916136349616E-4 0.0 0.0 0.005813318906811311 0.0 26 1.1863916136349616E-4 0.0 0.0 0.007474267165900258 0.0 27 1.1863916136349616E-4 0.0 0.0 0.009135215424989204 0.0 28 1.1863916136349616E-4 0.0 0.0 0.012575751104530592 0.0 29 1.1863916136349616E-4 0.0 0.0 0.01969410078634036 0.0 30 1.1863916136349616E-4 0.0 0.0 0.03167665608405347 0.0 31 1.1863916136349616E-4 0.0 0.0 0.05481129254993522 0.0 32 1.1863916136349616E-4 0.0 0.0 0.0832846912771743 0.0 33 1.1863916136349616E-4 0.0 0.0 0.10748708019532752 0.0 34 1.1863916136349616E-4 0.0 0.0 0.13453680898620463 0.0 35 1.1863916136349616E-4 0.0 0.0 0.16395932100435168 0.0 36 1.1863916136349616E-4 0.0 0.0 0.20821172819293576 0.0 37 1.1863916136349616E-4 0.0 0.0 0.2706159270701347 0.0 38 1.1863916136349616E-4 0.0 0.0 0.355087009960944 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 40 7.032348E-4 27.498665 5 ACCGAGT 50 0.002580523 21.998932 8 ATACCGT 135 1.1277734E-10 21.184156 6 CGTCTTA 85 6.1061037E-6 20.707335 15 TAGGACC 500 0.0 20.678995 4 GTCCTAA 330 0.0 20.668118 1 GTAGGAC 660 0.0 20.33114 3 GATATAC 455 0.0 20.309116 1 CTAGGAC 175 0.0 20.112116 3 ATAATAC 100 1.1237717E-6 19.797865 3 TAGGACG 585 0.0 19.554605 4 GCACTAC 80 8.9796195E-5 19.25135 1 TGTAGGA 710 0.0 18.89937 2 CGTATGC 70 8.119946E-4 18.857346 21 GCGCATG 70 8.126427E-4 18.855108 41 GTCTTAC 145 6.2937033E-9 18.208174 1 CTGTAGG 740 0.0 18.136408 1 AATCACG 365 0.0 18.08346 34 GTCCTAC 650 0.0 17.93972 1 AGGACGT 675 0.0 17.925056 5 >>END_MODULE