##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064040_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1160947 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262209213685036 32.0 32.0 32.0 32.0 32.0 2 30.876866041257696 32.0 32.0 32.0 32.0 32.0 3 30.883769026493027 32.0 32.0 32.0 32.0 32.0 4 30.91518303591809 32.0 32.0 32.0 32.0 32.0 5 30.798772036966373 32.0 32.0 32.0 32.0 32.0 6 34.46864499412979 36.0 36.0 36.0 32.0 36.0 7 34.421469713949044 36.0 36.0 36.0 32.0 36.0 8 34.37593361281781 36.0 36.0 36.0 32.0 36.0 9 34.52917919594952 36.0 36.0 36.0 32.0 36.0 10 34.21294770562308 36.0 36.0 36.0 32.0 36.0 11 34.50374306492889 36.0 36.0 36.0 32.0 36.0 12 34.31620909481656 36.0 36.0 36.0 32.0 36.0 13 34.391959322863144 36.0 36.0 36.0 32.0 36.0 14 34.29545448672506 36.0 36.0 36.0 32.0 36.0 15 34.23021895056363 36.0 36.0 36.0 32.0 36.0 16 34.233256987614425 36.0 36.0 36.0 32.0 36.0 17 34.187754479748 36.0 36.0 36.0 32.0 36.0 18 34.16099873637642 36.0 36.0 36.0 32.0 36.0 19 34.17187175641954 36.0 36.0 36.0 32.0 36.0 20 34.156439527385835 36.0 36.0 36.0 32.0 36.0 21 34.15483049613807 36.0 36.0 36.0 32.0 36.0 22 34.12942365155343 36.0 36.0 36.0 32.0 36.0 23 34.07361404095105 36.0 36.0 36.0 32.0 36.0 24 34.060954548312715 36.0 36.0 36.0 32.0 36.0 25 33.64016875878055 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 5.0 4 6.0 5 12.0 6 47.0 7 16.0 8 77.0 9 68.0 10 105.0 11 29.0 12 70.0 13 66.0 14 100.0 15 220.0 16 310.0 17 409.0 18 474.0 19 649.0 20 913.0 21 1435.0 22 2245.0 23 3415.0 24 5459.0 25 8148.0 26 11834.0 27 16347.0 28 22566.0 29 31408.0 30 41892.0 31 57483.0 32 82227.0 33 117066.0 34 247138.0 35 508707.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.26065789190237 17.31474978996575 11.902199435600268 26.522392882531616 2 16.13962487143396 19.422387460568775 38.51692075508105 25.921066912916213 3 18.92095130628031 23.190459373088817 28.90846131980395 28.980128000826923 4 12.964724042642631 15.70982613549441 35.90830938647812 35.41714043538484 5 14.42684325098226 36.62829512690347 34.433941540759605 14.51092008135467 6 34.00944867237883 35.667790606117514 16.944550214593754 13.378210506909902 7 30.182745848780417 30.272692888583702 20.86400851912193 18.68055274351395 8 27.61257368267314 34.411240867484494 19.27860128507924 18.697584164763118 9 27.35389295609571 14.372115670500229 18.42584014512675 39.84815122827731 10 15.693387250237869 27.555278616638397 32.84182421158593 23.909509921537804 11 36.25821864504503 21.22381862229266 23.08606512519402 19.43189760746829 12 24.257886131492555 23.483386526671797 29.855554875615503 22.40317246622015 13 30.10345549810422 20.252385561566925 24.787430540531922 24.856728399796932 14 23.110651410347575 19.491628418126574 25.71948197470209 31.678238196823756 15 24.789963043148504 28.023859922500932 22.12231269909125 25.063864335259318 16 24.749329635085317 25.995161133229157 24.72804000037925 24.527469231306277 17 23.696102420806856 26.421503267016195 25.722764306824576 24.159630005352373 18 23.857956847431623 25.815683536338323 26.92509934745317 23.401260268776884 19 25.591342237622992 25.2474970153821 25.264909082289254 23.89625166470565 20 25.623858375162385 25.318275738117833 25.412234856419264 23.645631030300525 21 25.420771659665657 24.72865884932905 24.980108976088534 24.870460514916758 22 25.46432863071112 25.267183995338183 25.268218422808435 24.000268951142267 23 24.737938263772033 25.339473393837412 25.440074066922293 24.48251427546826 24 24.939615504635082 24.908410383547146 25.667246518732554 24.48472759308522 25 24.766309220053788 25.175591338528374 25.62547410523412 24.432625336183712 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 25.0 2 120.0 3 215.0 4 215.0 5 215.0 6 563.5 7 912.0 8 912.0 9 912.0 10 1237.5 11 1563.0 12 1563.0 13 1563.0 14 2371.5 15 3180.0 16 3180.0 17 3180.0 18 5766.5 19 8353.0 20 8353.0 21 8353.0 22 12769.5 23 17186.0 24 17186.0 25 17186.0 26 26152.0 27 35118.0 28 35118.0 29 35118.0 30 46333.0 31 57548.0 32 57548.0 33 57548.0 34 67505.0 35 77462.0 36 77462.0 37 77462.0 38 89492.0 39 101522.0 40 101522.0 41 101522.0 42 113679.5 43 125837.0 44 125837.0 45 125837.0 46 137938.0 47 150039.0 48 150039.0 49 150039.0 50 152415.0 51 154791.0 52 154791.0 53 154791.0 54 147299.5 55 139808.0 56 139808.0 57 139808.0 58 127194.5 59 114581.0 60 114581.0 61 114581.0 62 98227.5 63 81874.0 64 81874.0 65 81874.0 66 65276.0 67 48678.0 68 48678.0 69 48678.0 70 35930.0 71 23182.0 72 23182.0 73 23182.0 74 16891.0 75 10600.0 76 10600.0 77 10600.0 78 7597.0 79 4594.0 80 4594.0 81 4594.0 82 3324.0 83 2054.0 84 2054.0 85 2054.0 86 1380.0 87 706.0 88 706.0 89 706.0 90 504.0 91 302.0 92 302.0 93 302.0 94 221.0 95 140.0 96 140.0 97 140.0 98 408.5 99 677.0 100 677.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03634963525466709 2 0.005598877468135927 3 0.001464321799358627 4 0.003703872786612998 5 0.008958203949017482 6 0.012834349888496202 7 0.02274005617827515 8 0.03411008426741272 9 0.05013148748392476 10 0.05538581864632924 11 0.054093769999836346 12 0.06150151557306234 13 0.06356879340745097 14 0.06649743700616824 15 0.05814218909218078 16 0.0652915249361082 17 0.06150151557306234 18 0.07554177753161859 19 0.07166563159213986 20 0.07476654834372284 21 0.07545564095518573 22 0.07623087014308147 23 0.07881496743606728 24 0.07588632383735003 25 0.07468041176728997 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1160947.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.77526287903809 #Duplication Level Percentage of deduplicated Percentage of total 1 59.41858025682455 24.82226810128068 2 17.035029243723137 14.23285649617271 3 8.29185361353693 10.391830933800213 4 4.688098903124659 7.83386256323851 5 2.9244631255500613 6.108510792495359 6 1.9404827992057085 4.863850742944209 7 1.3444664869634713 3.9315808647469086 8 0.9615944686473112 3.2136689368616302 9 0.6570432833883705 2.4703340297809944 >10 2.6433699174320298 17.36337985383849 >50 0.06501688960737581 1.849310832136875 >100 0.027931978349563402 2.0557574273425674 >500 0.0010345168233944749 0.29309913348012123 >1k 0.0010345168233944749 0.5696892918807075 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1870 0.16107539792944897 No Hit TATCAACGCAGAGTACTTTTTTTTT 1310 0.11283891512704715 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1268 0.10922117891686701 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.613657643286042E-5 2 0.0 0.0 0.0 0.0 8.613657643286042E-5 3 0.0 0.0 0.0 0.0 8.613657643286042E-5 4 0.0 0.0 0.0 8.613657643286042E-5 8.613657643286042E-5 5 0.0 0.0 0.0 8.613657643286042E-5 1.7227315286572084E-4 6 0.0 0.0 0.0 8.613657643286042E-5 3.445463057314417E-4 7 0.0 0.0 0.0 8.613657643286042E-5 3.445463057314417E-4 8 0.0 0.0 0.0 8.613657643286042E-5 3.445463057314417E-4 9 0.0 0.0 0.0 1.7227315286572084E-4 3.445463057314417E-4 10 0.0 0.0 0.0 1.7227315286572084E-4 3.445463057314417E-4 11 0.0 0.0 0.0 1.7227315286572084E-4 3.445463057314417E-4 12 0.0 0.0 0.0 1.7227315286572084E-4 6.029560350300229E-4 13 0.0 0.0 0.0 1.7227315286572084E-4 7.752291878957438E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCAACG 25 0.0060280156 19.001722 18 GGTATCA 365 0.0 14.834406 1 GATTAGG 40 0.0052808975 14.248835 1 TCTAGTA 40 0.005292991 14.243923 2 GTATCAA 1030 0.0 12.727116 1 CAAGGGT 70 1.09171095E-4 12.212763 4 CCCCCCT 95 1.0373278E-6 12.001607 16 TTATACT 80 2.8685543E-5 11.873517 4 TATACAC 200 0.0 11.871983 3 GTGTAAG 145 9.640644E-11 11.79214 1 GTCCTAC 630 0.0 11.610163 1 TAAGACA 100 1.9308973E-6 11.398577 4 GTATTAG 85 5.3243566E-5 11.175558 1 ATTATAC 85 5.3337157E-5 11.173631 3 TGCGATG 60 0.005870169 11.084339 12 TACACCG 60 0.005877709 11.082428 5 AGGGGTT 80 3.771968E-4 10.686626 5 TCTATTC 90 9.533916E-5 10.552874 3 TCCTACA 640 0.0 10.534569 2 CCTACAC 145 1.4464604E-8 10.480095 3 >>END_MODULE