##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064038_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 691416 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.178021625186574 32.0 32.0 32.0 32.0 32.0 2 31.139277945549424 32.0 32.0 32.0 32.0 32.0 3 31.302693313432144 32.0 32.0 32.0 32.0 32.0 4 31.434266780057158 32.0 32.0 32.0 32.0 32.0 5 31.320390329410948 32.0 32.0 32.0 32.0 32.0 6 34.91393748481377 36.0 36.0 36.0 36.0 36.0 7 34.93742262256008 36.0 36.0 36.0 36.0 36.0 8 34.864683490113045 36.0 36.0 36.0 32.0 36.0 9 35.02847923681257 36.0 36.0 36.0 36.0 36.0 10 34.80106911034746 36.0 36.0 36.0 32.0 36.0 11 35.03756638550453 36.0 36.0 36.0 36.0 36.0 12 34.89074160852511 36.0 36.0 36.0 32.0 36.0 13 34.952605956471935 36.0 36.0 36.0 36.0 36.0 14 34.88645041480093 36.0 36.0 36.0 32.0 36.0 15 34.86140037256876 36.0 36.0 36.0 32.0 36.0 16 34.8793013178752 36.0 36.0 36.0 32.0 36.0 17 34.82845927777199 36.0 36.0 36.0 32.0 36.0 18 34.83474348293936 36.0 36.0 36.0 32.0 36.0 19 34.83110602010946 36.0 36.0 36.0 32.0 36.0 20 34.82624353500642 36.0 36.0 36.0 32.0 36.0 21 34.82238334085413 36.0 36.0 36.0 32.0 36.0 22 34.79361918150578 36.0 36.0 36.0 32.0 36.0 23 34.74401228782672 36.0 36.0 36.0 32.0 36.0 24 34.71162368241406 36.0 36.0 36.0 32.0 36.0 25 34.68139730639731 36.0 36.0 36.0 32.0 36.0 26 34.61472398671712 36.0 36.0 36.0 32.0 36.0 27 34.61817487590683 36.0 36.0 36.0 32.0 36.0 28 34.58335792055723 36.0 36.0 36.0 32.0 36.0 29 34.551374281185275 36.0 36.0 36.0 32.0 36.0 30 34.52603353118817 36.0 36.0 36.0 32.0 36.0 31 34.510964455552084 36.0 36.0 36.0 32.0 36.0 32 34.47250859106529 36.0 36.0 36.0 32.0 36.0 33 34.45134043759473 36.0 36.0 36.0 32.0 36.0 34 34.429220613928514 36.0 36.0 36.0 32.0 36.0 35 34.384565876404366 36.0 36.0 36.0 32.0 36.0 36 34.35365828965485 36.0 36.0 36.0 32.0 36.0 37 34.33767804042718 36.0 36.0 36.0 32.0 36.0 38 34.29120529464172 36.0 36.0 36.0 32.0 36.0 39 34.28453203281382 36.0 36.0 36.0 32.0 36.0 40 34.27228470269707 36.0 36.0 36.0 32.0 36.0 41 34.243255869114975 36.0 36.0 36.0 32.0 36.0 42 34.16967643213348 36.0 36.0 36.0 32.0 36.0 43 34.16736234047231 36.0 36.0 36.0 32.0 36.0 44 34.094328161338474 36.0 36.0 36.0 32.0 36.0 45 34.04276152128386 36.0 36.0 36.0 32.0 36.0 46 34.028408367755446 36.0 36.0 36.0 32.0 36.0 47 33.99438688141437 36.0 36.0 36.0 32.0 36.0 48 33.942037789116824 36.0 36.0 36.0 32.0 36.0 49 33.92527074872436 36.0 36.0 36.0 32.0 36.0 50 33.24844377335786 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 2.0 20 2.0 21 20.0 22 79.0 23 231.0 24 663.0 25 1405.0 26 2875.0 27 5360.0 28 9217.0 29 14261.0 30 20732.0 31 30018.0 32 43797.0 33 70876.0 34 140486.0 35 351391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.76661787423123 18.677859998495727 11.97618042015494 26.579341707118104 2 15.80184347126826 21.08638397021751 36.70729361467025 26.404478943843984 3 17.710781513273506 24.944787139416995 29.26520251947094 28.079228827838566 4 12.053524940122879 16.28975898735349 36.69064644150555 34.96606963101808 5 14.144885278905898 37.20842445069249 33.3612470639962 15.285443206405406 6 33.682616543441284 36.60444652712694 16.62660395478265 13.086332974649126 7 29.561942448540385 30.96370347229454 21.25131613963229 18.223037939532784 8 27.98300878197785 32.97378134147893 19.61684427320166 19.426365603341548 9 27.592800167774318 13.612571502954129 18.461827727598152 40.332800601673405 10 15.370263503868165 26.957693881948998 32.135351808542794 25.536690805640045 11 37.63870086894142 20.839118562486263 22.656114408691728 18.866066159880592 12 24.381125111365662 23.825453851227046 29.236378677959436 22.557042359447856 13 29.35181917583149 19.47160303841993 25.51141721578451 25.665160569964073 14 23.492547890919347 19.70104785114584 25.55050150777753 31.25590275015729 15 25.055974358826017 27.415286351513192 22.395239720677825 25.133499568982977 16 25.70659955742613 25.62575027841657 23.8586366989196 24.809013465237705 17 23.983679868559594 25.7384845013711 25.461227394217083 24.81660823585222 18 24.73550617212528 24.863504552258775 26.378368996912126 24.02262027870382 19 25.66833859789186 24.777268677612323 25.40568919434899 24.14870353014683 20 25.709669907855364 24.28779904340821 25.01818739306319 24.98434365567324 21 26.96046952919805 24.192671271709074 24.47412266999896 24.372736529093917 22 25.747162345100488 24.324719127124624 25.012582873407617 24.915535654367268 23 24.43405668400317 23.97731019999653 25.58749341926377 26.001139696736537 24 24.780160020364125 24.995227158336853 25.19785598167229 25.026756839626735 25 24.69453636637123 24.436801425496956 25.691487515331033 25.17717469280078 26 24.644225526086274 25.375083709513884 25.64223096159993 24.33845980279991 27 25.151435381784943 24.730395843699014 25.103705032225214 25.014463742290825 28 24.52798259747698 24.59798609765199 25.845031921017537 25.02899938385349 29 24.491180265083802 24.730114375965425 25.567251563485314 25.21145379546546 30 24.58739215643735 24.97139840467461 25.842969648319702 24.598239790568343 31 25.13889069689067 24.83572495809052 24.72102532504256 25.304359019976253 32 24.722661752922356 25.009184343514697 24.677101623676226 25.59105227988672 33 24.423153969762318 24.42402178802382 25.411020424102787 25.741803818111077 34 25.09249429413619 24.58366719988892 25.563282296346223 24.76055620962866 35 25.901000581430665 24.431514120665664 25.367733201426674 24.299752096476993 36 24.810775080889766 25.10699723593487 24.924751183514545 25.15747649966082 37 25.551132928547254 25.033338443781695 24.818265706673763 24.59726292099729 38 24.739428898730917 24.82549040594996 25.342004090452814 25.09307660486631 39 25.313826594444482 24.755816223956263 24.62636591768696 25.30399126391229 40 25.661663781221026 24.93328762903149 25.155011346526834 24.25003724322065 41 24.478617495657254 25.27672794963139 25.71367823623086 24.530976318480494 42 25.998767721238874 25.399405844935362 24.909097746318352 23.69272868750741 43 24.98853789869672 24.47249023371116 25.34765963416733 25.19131223342479 44 24.749352046837757 25.159818804526417 24.610938837849723 25.479890310786107 45 24.919512300950235 25.43874112321199 24.711097612125947 24.930648963711835 46 24.65892310384676 25.228770647934013 24.696093362433164 25.416212885786067 47 24.92211432488957 24.93527606385902 25.185059835290236 24.95754977596117 48 25.82535674097987 25.329405060471682 24.277333749880675 24.567904448667772 49 24.900240233377833 25.579864942848758 24.51551971258774 25.004375111185677 50 25.002639575700865 25.68256534938581 24.394741675935315 24.920053398978016 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 64.0 1 42.0 2 20.0 3 70.0 4 120.0 5 139.5 6 159.0 7 141.5 8 124.0 9 171.5 10 219.0 11 316.5 12 414.0 13 799.5 14 1185.0 15 1508.0 16 1831.0 17 1990.0 18 2149.0 19 2181.0 20 2213.0 21 2498.5 22 2784.0 23 3154.5 24 3525.0 25 4050.0 26 4575.0 27 5677.0 28 6779.0 29 7837.0 30 8895.0 31 9835.5 32 10776.0 33 12504.5 34 14233.0 35 16408.5 36 18584.0 37 22280.5 38 25977.0 39 27915.0 40 29853.0 41 33103.5 42 36354.0 43 36829.0 44 37304.0 45 41291.5 46 45279.0 47 48489.0 48 51699.0 49 53010.0 50 54321.0 51 52378.0 52 50435.0 53 49916.5 54 49398.0 55 49502.0 56 49606.0 57 48374.0 58 47142.0 59 42537.5 60 37933.0 61 33456.0 62 28979.0 63 25032.0 64 21085.0 65 17761.0 66 14437.0 67 12500.5 68 10564.0 69 9584.5 70 8605.0 71 6684.5 72 4764.0 73 4068.0 74 3372.0 75 2611.5 76 1851.0 77 1678.0 78 1505.0 79 1217.0 80 929.0 81 750.5 82 572.0 83 486.5 84 401.0 85 288.0 86 175.0 87 135.0 88 95.0 89 73.0 90 51.0 91 42.5 92 34.0 93 24.0 94 14.0 95 13.5 96 13.0 97 11.5 98 10.0 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007520797898804772 2 4.338921864695061E-4 3 1.4463072882316868E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0015909380170548554 10 4.338921864695061E-4 11 0.0 12 0.0 13 5.785229152926747E-4 14 1.4463072882316868E-4 15 0.004049660407048724 16 8.677843729390122E-4 17 0.0 18 1.4463072882316868E-4 19 0.0 20 4.338921864695061E-4 21 0.0 22 0.0 23 5.785229152926747E-4 24 5.785229152926747E-4 25 0.0011570458305853494 26 0.005351336966457241 27 0.004628183322341398 28 0.003181876034109711 29 0.0017355687458780243 30 0.003037245305286542 31 0.00650838279704259 32 0.003181876034109711 33 0.0039050296782255542 34 0.003181876034109711 35 0.002603353118817036 36 0.0062191213393962535 37 0.003181876034109711 38 0.007231536441158434 39 0.004483552593518229 40 0.00216946093234753 41 0.004772814051164567 42 0.002024830203524362 43 0.001012415101762181 44 0.0011570458305853494 45 8.677843729390122E-4 46 4.338921864695061E-4 47 0.002603353118817036 48 0.002603353118817036 49 7.231536441158435E-4 50 0.0024587223899938675 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 691416.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.55623745488206 #Duplication Level Percentage of deduplicated Percentage of total 1 82.71389845217439 51.74270272393223 2 11.158714312214926 13.960943644122153 3 2.8565893830975515 5.360924512804364 4 1.1308663628813447 2.8297097890457685 5 0.5739887025323217 1.7953286786015785 6 0.33952785952178954 1.2743751241675743 7 0.21068808543264228 0.9225897730867192 8 0.14265714573812072 0.7139275426743675 9 0.11732270321676475 0.6605340193148931 >10 0.6093723168884401 7.211118972129264 >50 0.07202575349475587 3.233898761226709 >100 0.06923743436410733 8.260882949335917 >500 0.005111488442784472 2.033063509558479 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 847 0.12250222731322387 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 781 0.11295659921089474 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 774 0.11194418410913257 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 751 0.10861767734619968 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 739 0.10688210860032167 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 734 0.10615895495620581 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 734 0.10615895495620581 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.8926145764633735E-4 2 0.0 0.0 0.0 0.0 2.8926145764633735E-4 3 0.0 0.0 0.0 0.0 2.8926145764633735E-4 4 0.0 0.0 0.0 0.0 2.8926145764633735E-4 5 0.0 0.0 0.0 0.0 2.8926145764633735E-4 6 0.0 0.0 0.0 0.0 4.338921864695061E-4 7 0.0 0.0 0.0 0.0 4.338921864695061E-4 8 0.0 0.0 0.0 0.0 4.338921864695061E-4 9 0.0 0.0 0.0 0.0 4.338921864695061E-4 10 0.0 0.0 0.0 0.0 4.338921864695061E-4 11 0.0 0.0 0.0 0.0 4.338921864695061E-4 12 0.0 0.0 0.0 0.0 7.231536441158434E-4 13 0.0 0.0 0.0 0.0 7.231536441158434E-4 14 0.0 0.0 0.0 0.0 7.231536441158434E-4 15 0.0 0.0 0.0 0.0 7.231536441158434E-4 16 0.0 0.0 0.0 0.0 8.677843729390122E-4 17 0.0 0.0 0.0 0.0 0.0010124151017621807 18 0.0 0.0 0.0 0.0 0.0010124151017621807 19 0.0 0.0 0.0 0.0 0.0010124151017621807 20 0.0 0.0 0.0 0.0 0.0010124151017621807 21 0.0 0.0 0.0 0.0 0.0010124151017621807 22 0.0 0.0 0.0 1.4463072882316868E-4 0.0010124151017621807 23 0.0 0.0 0.0 5.785229152926747E-4 0.0010124151017621807 24 0.0 0.0 0.0 8.677843729390122E-4 0.0010124151017621807 25 0.0 0.0 0.0 0.0011570458305853494 0.0010124151017621807 26 0.0 0.0 0.0 0.0011570458305853494 0.0010124151017621807 27 0.0 0.0 0.0 0.0014463072882316868 0.0010124151017621807 28 0.0 0.0 0.0 0.002747983847640205 0.0010124151017621807 29 0.0 0.0 0.0 0.00549596769528041 0.0010124151017621807 30 0.0 0.0 0.0 0.010413412475268145 0.0010124151017621807 31 0.0 0.0 0.0 0.02097145567935946 0.0010124151017621807 32 0.0 0.0 0.0 0.03239728325638978 0.0010124151017621807 33 0.0 0.0 0.0 0.04382311083342011 0.0010124151017621807 34 0.0 0.0 0.0 0.055248938410450435 0.0010124151017621807 35 0.0 0.0 0.0 0.07057979566570632 0.0010124151017621807 36 0.0 0.0 0.0 0.09270829717565113 0.0010124151017621807 37 0.0 0.0 0.0 0.12510558043204092 0.0010124151017621807 38 0.0 0.0 0.0 0.16835016835016836 0.0011570458305853494 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACTG 100 4.6182322E-8 21.999386 5 GTATCAA 1290 0.0 20.63508 1 ACTAGGC 55 0.00448243 19.99944 3 GTCCTAA 125 2.2844688E-8 19.35946 1 GCGGGGA 160 5.2750693E-11 19.252247 36 CGTCGTA 245 0.0 18.856615 10 TACCGTC 260 0.0 18.614866 7 ATACCGT 285 0.0 18.525799 6 GGTCCTA 240 0.0 18.332819 13 AACGCAG 1455 0.0 18.143824 6 ACCGTCG 255 0.0 18.11714 8 CGCAATA 195 1.8189894E-12 18.053389 36 CCGTCGT 275 0.0 17.599508 9 TAGGGTG 75 0.0012903541 17.599508 5 GTATAGG 100 2.4811181E-5 17.599508 1 CGGCTCG 265 0.0 17.435997 36 AATACGA 210 9.094947E-12 16.76265 39 GTTATAG 105 3.771479E-5 16.761436 1 GAATATA 80 0.0019875623 16.49954 1 CTTATAG 80 0.0019875623 16.49954 3 >>END_MODULE