##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064037_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 854142 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.176419143421118 32.0 32.0 32.0 32.0 32.0 2 30.774718957737708 32.0 32.0 32.0 32.0 32.0 3 30.807623322585705 32.0 32.0 32.0 32.0 32.0 4 30.829054185369646 32.0 32.0 32.0 32.0 32.0 5 30.747118160680543 32.0 32.0 32.0 32.0 32.0 6 34.380688456954466 36.0 36.0 36.0 32.0 36.0 7 34.302855965401534 36.0 36.0 36.0 32.0 36.0 8 34.24171859011734 36.0 36.0 36.0 32.0 36.0 9 34.38355683247048 36.0 36.0 36.0 32.0 36.0 10 34.10285057988016 36.0 36.0 36.0 32.0 36.0 11 34.39614139100993 36.0 36.0 36.0 32.0 36.0 12 34.20107078214161 36.0 36.0 36.0 32.0 36.0 13 34.293498036626225 36.0 36.0 36.0 32.0 36.0 14 34.18464962500381 36.0 36.0 36.0 32.0 36.0 15 34.12343146689895 36.0 36.0 36.0 32.0 36.0 16 34.12616403361502 36.0 36.0 36.0 32.0 36.0 17 34.05178998339854 36.0 36.0 36.0 32.0 36.0 18 34.03489934928852 36.0 36.0 36.0 32.0 36.0 19 34.059949048284714 36.0 36.0 36.0 32.0 36.0 20 34.02084548002557 36.0 36.0 36.0 32.0 36.0 21 33.99454657422302 36.0 36.0 36.0 32.0 36.0 22 33.9815581015803 36.0 36.0 36.0 32.0 36.0 23 33.93275474101496 36.0 36.0 36.0 32.0 36.0 24 33.92112903943372 36.0 36.0 36.0 32.0 36.0 25 33.516311105179234 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 3.0 4 9.0 5 15.0 6 29.0 7 17.0 8 46.0 9 50.0 10 83.0 11 28.0 12 65.0 13 44.0 14 89.0 15 162.0 16 262.0 17 371.0 18 474.0 19 613.0 20 909.0 21 1330.0 22 2134.0 23 3302.0 24 4855.0 25 7064.0 26 10013.0 27 13209.0 28 18011.0 29 24337.0 30 32005.0 31 43946.0 32 61699.0 33 86268.0 34 178812.0 35 363887.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.87449623633938 17.249242524504492 11.26181890157562 25.614442337580506 2 16.347653414386272 20.124178659910175 37.994853013492694 25.533314912210862 3 18.420722962095713 24.77400848821894 28.857368652129374 27.947899897555978 4 11.97474318175964 15.534605774927234 36.55904536439271 35.93160567892041 5 13.92255813408894 37.424536917780955 34.035899117158046 14.617005830972063 6 33.48200015221859 36.26455590227567 17.34472240599039 12.908721539515359 7 29.654095083744846 30.75894388866965 21.430670883867332 18.15629014371817 8 28.106521003324975 32.93470329956046 19.7827230128326 19.17605268428197 9 27.656725858595323 13.657288103827952 18.663613362695028 40.022372674881694 10 15.43633045234419 27.097190625578406 32.35232099638959 25.11415792568782 11 37.15582305512571 20.940835243719157 22.861139062421294 19.042202638733837 12 24.322329560231776 23.93959132413137 29.741232869330098 21.99684624630676 13 29.567077606900888 19.68611867085456 25.725335092218454 25.02146863002609 14 23.230941002663005 19.902477543708784 25.980291653535186 30.886289800093024 15 24.79502171323072 27.59237934132824 22.883062508566386 24.729536436874653 16 25.09636180019073 25.86655325849331 24.63839429022651 24.398690651089446 17 23.36387940588631 25.96423977300152 25.940808881245207 24.731071939866958 18 24.1720476975515 25.031489429511133 27.105749413271376 23.690713459665997 19 25.111045237093737 25.12780015020838 25.92383427399087 23.837320338707013 20 25.46312027652469 24.4146698693538 25.628332063975627 24.49387779014588 21 26.63467194079726 24.383519591692306 24.726705207188502 24.25510326032193 22 25.53377467924307 24.67572792782237 25.388130529029233 24.402366863905325 23 24.022839948114463 24.664378609753495 25.878087734366666 25.434693707765373 24 24.433519123672625 25.23073426044939 25.791737504847852 24.544009111030135 25 24.47540075059083 24.88444111681729 25.92901140180981 24.711146730782076 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 103.0 1 103.0 2 291.5 3 480.0 4 480.0 5 480.0 6 1497.5 7 2515.0 8 2515.0 9 2515.0 10 2413.0 11 2311.0 12 2311.0 13 2311.0 14 2402.0 15 2493.0 16 2493.0 17 2493.0 18 4380.0 19 6267.0 20 6267.0 21 6267.0 22 9996.5 23 13726.0 24 13726.0 25 13726.0 26 20695.5 27 27665.0 28 27665.0 29 27665.0 30 34687.5 31 41710.0 32 41710.0 33 41710.0 34 49913.5 35 58117.0 36 58117.0 37 58117.0 38 65280.0 39 72443.0 40 72443.0 41 72443.0 42 81742.0 43 91041.0 44 91041.0 45 91041.0 46 102094.0 47 113147.0 48 113147.0 49 113147.0 50 112793.5 51 112440.0 52 112440.0 53 112440.0 54 103466.0 55 94492.0 56 94492.0 57 94492.0 58 86341.0 59 78190.0 60 78190.0 61 78190.0 62 68515.5 63 58841.0 64 58841.0 65 58841.0 66 48246.0 67 37651.0 68 37651.0 69 37651.0 70 28424.5 71 19198.0 72 19198.0 73 19198.0 74 14689.5 75 10181.0 76 10181.0 77 10181.0 78 8188.0 79 6195.0 80 6195.0 81 6195.0 82 4279.0 83 2363.0 84 2363.0 85 2363.0 86 1801.5 87 1240.0 88 1240.0 89 1240.0 90 894.0 91 548.0 92 548.0 93 548.0 94 388.0 95 228.0 96 228.0 97 228.0 98 392.5 99 557.0 100 557.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03734741998403076 2 0.00585382758370388 3 0.0019903013784593193 4 0.004214755860266794 5 0.009600277237274364 6 0.012527191029126304 7 0.020956702749659894 8 0.03524004205389736 9 0.04940630480646075 10 0.05853827583703881 11 0.05561136204518687 12 0.06509456273078716 13 0.06685071100589832 14 0.06966054824607618 15 0.06029442411214997 16 0.06884101238435764 17 0.06649948135087608 18 0.07972913169004685 19 0.0773876006565653 20 0.08101697375846172 21 0.07820713651828384 22 0.08101697375846172 23 0.08488049996370627 24 0.07855836617330608 25 0.07972913169004685 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 854142.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.193012449049796 #Duplication Level Percentage of deduplicated Percentage of total 1 75.94814894187873 41.15858981089522 2 14.437807661089149 15.648565806287815 3 4.592537516259743 7.466503283741773 4 1.873915484555962 4.062125007320336 5 0.9401715568410437 2.54753644420646 6 0.5355445714672964 1.7413664177128938 7 0.33560945990172103 1.2731381346930992 8 0.22073577112801832 0.9569869114153042 9 0.1587074876279505 0.7740753167501044 >10 0.7780028896456548 7.738880809159733 >50 0.08430443195841583 3.2202175703672746 >100 0.0853887160204131 9.281907644233653 >500 0.007821867107930362 2.9116570309914316 >1k 0.0013036445179883938 1.2184498122249812 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2786 0.32617527296398025 No Hit TATCAACGCAGAGTACTTTTTTTTT 2125 0.24878767230741491 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1956 0.22900173507449578 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1252 0.14657984269594518 No Hit GTACATGGGGTGGTATCAACGCAAA 1161 0.1359258764936041 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1068 0.12503775718791488 No Hit GGTATCAACGCAGAGTACTTTTTTT 976 0.11426671443389975 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 934 0.10934949926358849 No Hit GAATAGGACCGCGGTTCTATTTTGT 914 0.10700796823010694 No Hit GATTAAGAGGGACGGCCGGGGGCAT 891 0.10431520754160316 No Hit GAATAACGCCGCCGCATCGCCAGTC 860 0.10068583443970675 No Hit GTATCTGATCGTCTTCGAACCTCCG 856 0.10021752823301043 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3415310334815522E-4 2 0.0 0.0 0.0 0.0 2.3415310334815522E-4 3 0.0 0.0 0.0 1.1707655167407761E-4 2.3415310334815522E-4 4 0.0 0.0 0.0 1.1707655167407761E-4 2.3415310334815522E-4 5 0.0 0.0 0.0 2.3415310334815522E-4 2.3415310334815522E-4 6 0.0 0.0 0.0 2.3415310334815522E-4 2.3415310334815522E-4 7 0.0 0.0 0.0 2.3415310334815522E-4 2.3415310334815522E-4 8 0.0 0.0 0.0 2.3415310334815522E-4 2.3415310334815522E-4 9 0.0 0.0 0.0 2.3415310334815522E-4 2.3415310334815522E-4 10 0.0 0.0 0.0 3.5122965502223285E-4 2.3415310334815522E-4 11 0.0 0.0 0.0 3.5122965502223285E-4 2.3415310334815522E-4 12 0.0 0.0 0.0 3.5122965502223285E-4 5.85382758370388E-4 13 0.0 0.0 0.0 3.5122965502223285E-4 9.366124133926209E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTAGAC 40 0.0052915453 14.243896 3 ACTCTAA 205 0.0 12.975369 10 GTAAACG 60 4.0832473E-4 12.668658 17 CGCGGTC 105 1.989065E-8 12.666432 10 AACCGCG 105 1.990702E-8 12.665689 7 CCGACCA 205 0.0 12.511964 9 CGACCAT 200 0.0 12.3497715 10 GCTTTGA 255 0.0 12.298934 1 GCGTTAT 70 1.0858114E-4 12.21907 1 TGCACCG 55 0.0030709624 12.088561 5 GCACGCC 120 9.969881E-9 11.876172 15 ACGGTAT 145 9.640644E-11 11.792886 9 TAAACGC 65 7.998477E-4 11.695518 18 GAACCGC 130 2.6102498E-9 11.691407 6 TAGGATT 65 8.041841E-4 11.6879835 4 TTTGAAC 245 0.0 11.62767 3 CCGTCGT 180 0.0 11.610896 9 GTATTAC 75 2.0642031E-4 11.404466 1 ACGCCCC 125 1.8220817E-8 11.4017935 17 CGCATCG 150 1.7462298E-10 11.400456 13 >>END_MODULE