##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064036_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2315571 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.366242278902266 32.0 32.0 32.0 32.0 32.0 2 31.45560511856471 32.0 32.0 32.0 32.0 32.0 3 31.50661111233471 32.0 32.0 32.0 32.0 32.0 4 31.578219367922642 32.0 32.0 32.0 32.0 32.0 5 31.541993745819067 32.0 32.0 32.0 32.0 32.0 6 35.137263767770456 36.0 36.0 36.0 36.0 36.0 7 35.16064806477539 36.0 36.0 36.0 36.0 36.0 8 35.108707096435396 36.0 36.0 36.0 36.0 36.0 9 35.20880810823767 36.0 36.0 36.0 36.0 36.0 10 35.07705442847574 36.0 36.0 36.0 36.0 36.0 11 35.19934780665331 36.0 36.0 36.0 36.0 36.0 12 35.12525074808762 36.0 36.0 36.0 36.0 36.0 13 35.15023465054624 36.0 36.0 36.0 36.0 36.0 14 35.10177489699085 36.0 36.0 36.0 36.0 36.0 15 35.074229639255286 36.0 36.0 36.0 36.0 36.0 16 35.095899888191724 36.0 36.0 36.0 36.0 36.0 17 35.06815122490306 36.0 36.0 36.0 36.0 36.0 18 35.06140299736005 36.0 36.0 36.0 36.0 36.0 19 35.056780379439886 36.0 36.0 36.0 36.0 36.0 20 35.05113987003637 36.0 36.0 36.0 36.0 36.0 21 35.05336739836524 36.0 36.0 36.0 36.0 36.0 22 35.03497970910847 36.0 36.0 36.0 36.0 36.0 23 34.986946200310854 36.0 36.0 36.0 36.0 36.0 24 34.96586155207506 36.0 36.0 36.0 36.0 36.0 25 34.94047602081733 36.0 36.0 36.0 36.0 36.0 26 34.89101996872478 36.0 36.0 36.0 32.0 36.0 27 34.87813243472129 36.0 36.0 36.0 32.0 36.0 28 34.864993990683075 36.0 36.0 36.0 32.0 36.0 29 34.84074554397166 36.0 36.0 36.0 32.0 36.0 30 34.82991365844537 36.0 36.0 36.0 32.0 36.0 31 34.81680414895505 36.0 36.0 36.0 32.0 36.0 32 34.7840636283664 36.0 36.0 36.0 32.0 36.0 33 34.76703974959092 36.0 36.0 36.0 32.0 36.0 34 34.7630243253176 36.0 36.0 36.0 32.0 36.0 35 34.727711221119975 36.0 36.0 36.0 32.0 36.0 36 34.71137270245654 36.0 36.0 36.0 32.0 36.0 37 34.69650466342859 36.0 36.0 36.0 32.0 36.0 38 34.68070294540742 36.0 36.0 36.0 32.0 36.0 39 34.66338324326915 36.0 36.0 36.0 32.0 36.0 40 34.65335807021249 36.0 36.0 36.0 32.0 36.0 41 34.63636053483137 36.0 36.0 36.0 32.0 36.0 42 34.59914941066372 36.0 36.0 36.0 32.0 36.0 43 34.58023269422531 36.0 36.0 36.0 32.0 36.0 44 34.55582532342994 36.0 36.0 36.0 32.0 36.0 45 34.52078774522569 36.0 36.0 36.0 32.0 36.0 46 34.500802609809845 36.0 36.0 36.0 32.0 36.0 47 34.473210711310514 36.0 36.0 36.0 32.0 36.0 48 34.43632909550171 36.0 36.0 36.0 32.0 36.0 49 34.42000957863093 36.0 36.0 36.0 32.0 36.0 50 33.842004844593404 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 2.0 19 11.0 20 18.0 21 53.0 22 189.0 23 617.0 24 1607.0 25 3662.0 26 7724.0 27 14279.0 28 24023.0 29 37059.0 30 53825.0 31 76627.0 32 109977.0 33 176136.0 34 374503.0 35 1435257.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.360528645777094 17.62243289351502 11.912626600729912 27.104411859977972 2 15.906631253913758 19.934529593401134 37.05866856686316 27.100170585821942 3 18.11313274568647 23.551723706070618 28.848578077987945 29.486565470254966 4 12.76777952392736 15.933910037740151 35.39982146952091 35.898488968811584 5 14.352399472959371 36.62275956988579 33.98820420535583 15.036636751799016 6 34.90138903524152 35.42260114598431 16.320775413678916 13.35523440509526 7 30.43178588070578 30.27804397104988 20.712706034672255 18.577464113572084 8 27.95958318704112 33.93348767971269 18.982315808930064 19.12461332431612 9 27.408034410979727 14.15825250265597 18.05665201205766 40.37706107430664 10 15.48708013627905 27.485734447600414 32.69988939959224 24.327296016528305 11 36.96345307485713 21.03070905621119 22.453641024179348 19.55219684475233 12 24.265308898692112 23.462697009153274 29.38893963244392 22.883054459710696 13 30.002604122805764 19.882844704021792 24.736834604516662 25.377716568655778 14 23.481180618984997 18.893099524306162 25.499176226968363 32.126543629740475 15 25.07427221007925 27.275079044461403 22.131412685723713 25.51923605973563 16 25.550247003844873 25.81882238827821 23.739058219836227 24.891872388040685 17 24.285629764753487 25.85332084397326 25.26003305448203 24.60101633679123 18 24.575698057668788 25.6553467658907 25.654526232872456 24.114428943568058 19 25.651405766789935 25.09003186689751 25.323408630880788 23.935153735431765 20 25.77326933723966 24.912483297762353 25.080563734529647 24.233683630468335 21 25.86359908635926 24.619845385868107 24.89355757176092 24.622997956011712 22 25.834752352231654 24.561630045686435 25.013096144486425 24.590521457595482 23 25.003217372602844 24.855563722547604 25.042732754235054 25.098486150614498 24 24.960441466326014 24.89099810153587 25.063872348584965 25.084688083553154 25 25.106800510638593 24.656148133560666 25.323295035438942 24.9137563203618 26 24.915340540274407 25.007590307382614 25.326879880524462 24.750189271818517 27 25.18730878265271 25.12019376115345 24.875141874418034 24.81735558177581 28 25.180589061956105 24.79202998257811 25.13563074233484 24.89175021313094 29 24.975912444380526 25.084139094998903 24.93674182502264 25.00320663559793 30 25.005052939255894 25.084647529415015 25.03532738727627 24.87497214405282 31 25.087284681948613 24.783191933012354 25.020255574385896 25.109267810653137 32 25.062341016372347 25.104621484005545 24.988447369671217 24.844590129950898 33 24.997462706098446 24.836760227669764 25.173367353945803 24.992409712285987 34 25.138588017426937 24.69540003524083 25.189721770195238 24.976290177136992 35 25.038069498536387 24.92712163496296 25.3519971047315 24.682811761769155 36 25.026107777396756 24.920596941697383 25.18603680915884 24.86725847174702 37 25.30289380513393 24.795314010204283 24.988792907616418 24.91299927704537 38 25.017912725830993 24.912487858432673 25.110596775579786 24.95900264015655 39 25.162224014034294 24.89415760335586 25.02272755737386 24.92089082523599 40 25.344717980787003 24.67139073968826 25.169249532285676 24.81464174723906 41 24.929680202013135 24.840498330161225 25.33870756681191 24.891113901013735 42 25.15746982431183 24.617548605649784 25.263320640736453 24.96166092930193 43 24.96007414246859 24.491760460401927 25.37457752871682 25.173587868412667 44 24.669592109337447 24.724654692822043 25.35733457364502 25.24841862419549 45 24.74233927649862 24.758015931454583 25.32155496870067 25.178089823346124 46 24.898242274294347 24.61282399983762 25.140215128248204 25.34871859761983 47 24.79568339606931 24.755390140633395 25.487664995050796 24.961261468246494 48 24.818777599032618 24.903596376631647 25.183316958357178 25.09430906597856 49 24.753784942456612 24.846591986290985 25.219331677000394 25.18029139425201 50 24.586262279548976 25.03371788056075 25.275260123245708 25.104759716644566 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 5.0 1 19.0 2 33.0 3 133.5 4 234.0 5 269.0 6 304.0 7 295.5 8 287.0 9 397.0 10 507.0 11 735.5 12 964.0 13 1757.5 14 2551.0 15 3299.5 16 4048.0 17 4017.5 18 3987.0 19 4069.0 20 4151.0 21 4884.5 22 5618.0 23 7005.5 24 8393.0 25 10902.5 26 13412.0 27 16589.0 28 19766.0 29 23832.5 30 27899.0 31 33066.5 32 38234.0 33 45315.0 34 52396.0 35 59988.5 36 67581.0 37 75347.0 38 83113.0 39 92011.0 40 100909.0 41 110221.0 42 119533.0 43 127345.5 44 135158.0 45 144075.5 46 152993.0 47 159733.5 48 166474.0 49 171732.5 50 176991.0 51 178653.0 52 180315.0 53 180943.5 54 181572.0 55 176184.0 56 170796.0 57 162102.0 58 153408.0 59 141423.0 60 129438.0 61 114125.5 62 98813.0 63 85508.0 64 72203.0 65 59988.0 66 47773.0 67 40455.0 68 33137.0 69 27701.0 70 22265.0 71 18119.5 72 13974.0 73 11783.5 74 9593.0 75 8043.0 76 6493.0 77 5319.0 78 4145.0 79 3393.5 80 2642.0 81 2206.0 82 1770.0 83 1266.5 84 763.0 85 621.0 86 479.0 87 359.5 88 240.0 89 163.0 90 86.0 91 65.0 92 44.0 93 38.5 94 33.0 95 27.5 96 22.0 97 21.0 98 20.0 99 13.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009544082215574474 2 9.069037399414658E-4 3 3.454871390253203E-4 4 0.0 5 0.0 6 3.023012466471553E-4 7 8.637178475633007E-5 8 0.0 9 0.0013387626637231162 10 0.001209204986588621 11 0.0 12 2.5911535426899026E-4 13 5.182307085379805E-4 14 2.5911535426899026E-4 15 0.004404961022572834 16 8.637178475633008E-4 17 0.0 18 1.2955767713449513E-4 19 8.637178475633007E-5 20 5.614166009161455E-4 21 0.0 22 1.7274356951266014E-4 23 7.341601704288057E-4 24 6.477883856724757E-4 25 0.0016842498027484368 26 0.005095935300623475 27 0.006175582610077601 28 0.004016287991169349 29 0.0025911535426899027 30 0.0037571726369003584 31 0.0068665568881282404 32 0.003498057282631368 33 0.004836819946354484 34 0.0032389419283623782 35 0.002979826574093388 36 0.007298415811909892 37 0.003152570143606048 38 0.007687088843313377 39 0.004318589237816505 40 0.002375224080799077 41 0.0033684996054968736 42 0.002072922834151922 43 0.0012523908789667862 44 0.001036461417075961 45 0.001122833201832291 46 9.500896323196309E-4 47 0.002029736941773757 48 0.001986551049395592 49 6.046024932943105E-4 50 0.0014683203408576114 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2315571.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.203342710737395 #Duplication Level Percentage of deduplicated Percentage of total 1 61.703196404579366 26.657843406149816 2 16.21155030976794 14.007863278105306 3 7.7483340790662565 10.04261797965556 4 4.394948294904969 7.5950582952300145 5 2.730030984909143 5.897323212598083 6 1.7788153710989125 4.611046205802831 7 1.2029222359828484 3.6379183130873476 8 0.8736888578453773 3.019702331843725 9 0.6461992736734188 2.5126171811948073 >10 2.615291733342802 18.17358653984925 >50 0.07066711059864568 2.039440325393454 >100 0.024052650753073248 1.701758890278863 >500 2.0179565151893432E-4 0.05217870644030234 >1k 1.0089782575945428E-4 0.051045334370582014 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 8.637178475633009E-5 0.0 17 0.0 0.0 0.0 8.637178475633009E-5 0.0 18 0.0 0.0 0.0 8.637178475633009E-5 0.0 19 0.0 0.0 0.0 8.637178475633009E-5 0.0 20 0.0 0.0 0.0 1.7274356951266017E-4 0.0 21 0.0 0.0 0.0 1.7274356951266017E-4 0.0 22 0.0 0.0 0.0 2.5911535426899026E-4 0.0 23 0.0 0.0 0.0 3.8867303140348536E-4 0.0 24 0.0 0.0 0.0 4.318589237816504E-4 0.0 25 0.0 0.0 0.0 4.7504481615981545E-4 0.0 26 0.0 0.0 0.0 5.614166009161455E-4 0.0 27 0.0 0.0 0.0 0.001209204986588621 0.0 28 0.0 0.0 0.0 0.0036708008521440286 0.0 29 0.0 0.0 0.0 0.009932755246977959 0.0 30 0.0 0.0 0.0 0.02193843332810784 0.0 31 0.0 0.0 0.0 0.05186625674617621 0.0 32 0.0 0.0 0.0 0.08343514407461486 0.0 33 0.0 0.0 0.0 0.1143994289097592 0.0 34 0.0 0.0 0.0 0.14769575193332443 0.0 35 0.0 0.0 0.0 0.18699491399745463 0.0 36 0.0 0.0 0.0 0.24460489442992678 0.0 37 0.0 0.0 0.0 0.33978660123140253 0.0 38 0.0 0.0 0.0 0.4702511821058391 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2145 0.0 30.3589 1 GGTATCA 775 0.0 25.264454 1 TATGCGC 80 8.9887966E-5 19.2512 10 TAGGACG 435 0.0 19.216269 4 CGCAATA 220 0.0 19.002415 36 TCAACGC 3335 0.0 18.930443 4 TACCGTA 70 8.1336056E-4 18.854654 7 ATCAACG 3410 0.0 18.514086 3 CAACGCA 3435 0.0 18.37934 5 TATCAAC 3485 0.0 18.36813 2 AACGCAG 3510 0.0 18.04929 6 TCTAGCG 195 4.9112714E-11 16.923037 28 CCGATCG 110 5.6238903E-5 16.000307 9 GCGCAAT 280 0.0 15.716284 35 TACGAAT 225 2.5465852E-11 15.64373 41 TACCGTC 270 0.0 15.479438 7 ACGCAGA 4070 0.0 15.457419 7 CGCGCTA 115 8.213802E-5 15.306293 36 ATACCGT 290 0.0 15.170738 6 GTCCTAC 605 0.0 14.909054 1 >>END_MODULE