##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064034_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 953149 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289819325205187 32.0 32.0 32.0 32.0 32.0 2 31.372279675056053 32.0 32.0 32.0 32.0 32.0 3 31.44911446164241 32.0 32.0 32.0 32.0 32.0 4 31.538506571375514 32.0 32.0 32.0 32.0 32.0 5 31.485961796109528 32.0 32.0 32.0 32.0 32.0 6 35.054573838927595 36.0 36.0 36.0 36.0 36.0 7 35.07692081720696 36.0 36.0 36.0 36.0 36.0 8 35.021489819535034 36.0 36.0 36.0 36.0 36.0 9 35.142638768964765 36.0 36.0 36.0 36.0 36.0 10 34.98799663011764 36.0 36.0 36.0 36.0 36.0 11 35.13586752963073 36.0 36.0 36.0 36.0 36.0 12 35.0360122079549 36.0 36.0 36.0 36.0 36.0 13 35.08505385831596 36.0 36.0 36.0 36.0 36.0 14 35.022676412607055 36.0 36.0 36.0 36.0 36.0 15 34.99015578886407 36.0 36.0 36.0 36.0 36.0 16 35.01206946657868 36.0 36.0 36.0 36.0 36.0 17 34.966951651840375 36.0 36.0 36.0 36.0 36.0 18 34.966037838784914 36.0 36.0 36.0 36.0 36.0 19 34.96336564377658 36.0 36.0 36.0 36.0 36.0 20 34.95181026261371 36.0 36.0 36.0 36.0 36.0 21 34.95082300878457 36.0 36.0 36.0 36.0 36.0 22 34.93283526500054 36.0 36.0 36.0 36.0 36.0 23 34.887094252839795 36.0 36.0 36.0 32.0 36.0 24 34.85446766455192 36.0 36.0 36.0 32.0 36.0 25 34.828741361529 36.0 36.0 36.0 32.0 36.0 26 34.76695983524087 36.0 36.0 36.0 32.0 36.0 27 34.76076982717288 36.0 36.0 36.0 32.0 36.0 28 34.73318966919128 36.0 36.0 36.0 32.0 36.0 29 34.70874123563053 36.0 36.0 36.0 32.0 36.0 30 34.68462853132092 36.0 36.0 36.0 32.0 36.0 31 34.679973435423 36.0 36.0 36.0 32.0 36.0 32 34.63164101310498 36.0 36.0 36.0 32.0 36.0 33 34.60999067302174 36.0 36.0 36.0 32.0 36.0 34 34.58976088733241 36.0 36.0 36.0 32.0 36.0 35 34.552014427964565 36.0 36.0 36.0 32.0 36.0 36 34.51693806529724 36.0 36.0 36.0 32.0 36.0 37 34.50672350283114 36.0 36.0 36.0 32.0 36.0 38 34.47030002654359 36.0 36.0 36.0 32.0 36.0 39 34.46116294514289 36.0 36.0 36.0 32.0 36.0 40 34.441518587335246 36.0 36.0 36.0 32.0 36.0 41 34.42312587014202 36.0 36.0 36.0 32.0 36.0 42 34.358409860368106 36.0 36.0 36.0 32.0 36.0 43 34.34415605534917 36.0 36.0 36.0 32.0 36.0 44 34.28038323494018 36.0 36.0 36.0 32.0 36.0 45 34.24199784084125 36.0 36.0 36.0 32.0 36.0 46 34.213189123631246 36.0 36.0 36.0 32.0 36.0 47 34.17411548456747 36.0 36.0 36.0 32.0 36.0 48 34.113753463519345 36.0 36.0 36.0 32.0 36.0 49 34.1053056762374 36.0 36.0 36.0 32.0 36.0 50 33.50639511765736 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 4.0 21 27.0 22 110.0 23 288.0 24 786.0 25 1830.0 26 3845.0 27 7118.0 28 11827.0 29 17857.0 30 25455.0 31 36167.0 32 51516.0 33 81745.0 34 167778.0 35 546793.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.913189915945225 17.821584796064084 11.66610182473672 26.59912346325397 2 15.93227487470453 20.501454654948294 36.795793303656204 26.77047716669097 3 17.88846397977223 24.61587691274675 28.956139936735752 28.53951917074527 4 12.152664483727097 15.835614368792287 36.01661440131606 35.99510674616456 5 14.075239023489509 37.117071937336135 33.53137861971213 15.276310419462224 6 34.17552591572968 35.824799322664816 16.679064194714982 13.320610566890522 7 29.907349023812696 30.64868273204448 21.125177963105376 18.318790281037447 8 28.13075395347422 32.86705436400815 19.48625031343473 19.515941369082903 9 27.72450911990432 13.516028684289214 18.309368557444643 40.45009363836183 10 15.673828586056867 26.79870701458228 32.15110429389924 25.376360105461615 11 37.512917707514774 20.746074328357896 22.559117199934114 19.181890764193216 12 24.569846445672656 23.50883598349889 29.259779173853378 22.661538396975075 13 29.783988341728367 19.35344434151014 25.28865028647328 25.57391703028821 14 23.59772417056341 19.270269958358995 25.421682070026975 31.710323801050627 15 25.20671865803105 27.29357774100914 22.27850598096541 25.221197619994395 16 25.633509347495604 25.445499783348353 23.976045567139455 24.944945302016592 17 24.063498991238514 25.662724295991495 25.35815491596802 24.915621796801968 18 24.78746720075707 24.718432728634724 26.36812579801437 24.12597427259384 19 25.617637554713436 24.60877009656423 25.45187106304582 24.321721285676517 20 25.961267092136225 23.97751439185935 25.113965060856557 24.947253455147862 21 26.688796819804665 23.97043903943665 24.638854995388968 24.701909145369715 22 25.9066797601212 24.076848506213096 25.04700214447284 24.969469589192865 23 24.580257107275614 23.955062356855162 25.603818104943333 25.860862430925895 24 24.82570857529547 24.67242654580363 25.467059051875633 25.03480582702527 25 24.990609885325192 24.177709231689278 25.622003294408945 25.209677588576586 26 24.6014350959546 24.89814889618899 25.82238930151599 24.67802670634042 27 25.137160142401026 24.63594461342821 25.1651744916235 25.061720752547263 28 24.67469651981408 24.534418902330266 25.71591946365058 25.074965114205078 29 24.712864971257645 24.56576958063125 25.479502645513747 25.24186280259736 30 24.57607735421069 24.882753729323216 25.704054675057336 24.83711424140876 31 25.127690738696696 24.537291571362022 24.94470581816503 25.390311871776255 32 24.804746516703037 24.778936545240892 24.824261373174416 25.59205556488165 33 24.532269030292348 24.489356969590144 25.361657391786064 25.616716608331448 34 25.211778604537948 24.523826011050048 25.443963916325156 24.82043146808685 35 25.678694221171167 24.405713044673423 25.396986938644467 24.51860579551094 36 24.661021128275294 25.041995293169638 25.121631589273967 25.175351989281104 37 25.52444104038359 24.83984010240161 24.91380847960886 24.721910377605944 38 24.910710163722516 24.67505214694316 25.296303757517762 25.11793393181656 39 25.365567559570962 24.583598693535983 24.83341324741084 25.21742049948222 40 25.555358542391694 24.744235528887668 25.199161073649467 24.50124485507117 41 24.64723638336112 25.02232149882963 25.507886230127045 24.822555887682203 42 25.62299347420106 25.261241790293138 24.956879367144385 24.158885368361418 43 24.98748857709712 24.522703642424055 25.240339974966663 25.24946780551216 44 24.703793893217867 24.959790670176478 24.92170590376829 25.41470953283736 45 24.83315619895146 25.116955904555173 24.888552222817918 25.16133567367545 46 24.614432297458926 24.90935224625973 24.99045260927041 25.485762847010935 47 24.95339055514813 24.907436842497322 25.220509624574955 24.918662977779597 48 25.402830673675155 25.260142897611026 24.419753863586287 24.917272565127526 49 24.79045773535932 25.32374266772561 24.652284165434786 25.23351543148028 50 24.778231834944684 25.598367492537783 24.59168952981477 25.03171114270277 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 95.0 1 67.0 2 39.0 3 121.5 4 204.0 5 227.5 6 251.0 7 221.5 8 192.0 9 293.5 10 395.0 11 545.0 12 695.0 13 1292.5 14 1890.0 15 2419.0 16 2948.0 17 3116.0 18 3284.0 19 3248.5 20 3213.0 21 3587.0 22 3961.0 23 4394.5 24 4828.0 25 5322.0 26 5816.0 27 7022.0 28 8228.0 29 9622.0 30 11016.0 31 12682.0 32 14348.0 33 16703.5 34 19059.0 35 22129.5 36 25200.0 37 29432.5 38 33665.0 39 36644.5 40 39624.0 41 43200.5 42 46777.0 43 48763.5 44 50750.0 45 55984.5 46 61219.0 47 65049.5 48 68880.0 49 71702.0 50 74524.0 51 73439.5 52 72355.0 53 72171.0 54 71987.0 55 71371.5 56 70756.0 57 68217.0 58 65678.0 59 59854.0 60 54030.0 61 47882.0 62 41734.0 63 35896.5 64 30059.0 65 25576.0 66 21093.0 67 17768.0 68 14443.0 69 12946.5 70 11450.0 71 8937.0 72 6424.0 73 5515.0 74 4606.0 75 3597.0 76 2588.0 77 2268.0 78 1948.0 79 1601.5 80 1255.0 81 1023.0 82 791.0 83 611.5 84 432.0 85 314.0 86 196.0 87 151.5 88 107.0 89 76.0 90 45.0 91 35.5 92 26.0 93 21.5 94 17.0 95 15.0 96 13.0 97 10.0 98 7.0 99 7.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008393231278635343 2 2.098307819658836E-4 3 4.196615639317672E-4 4 0.0 5 0.0 6 2.098307819658836E-4 7 2.098307819658836E-4 8 0.0 9 0.0014688154737611853 10 6.294923458976509E-4 11 0.0 12 1.049153909829418E-4 13 6.294923458976509E-4 14 2.098307819658836E-4 15 0.004406446421283556 16 6.294923458976509E-4 17 0.0 18 2.098307819658836E-4 19 1.049153909829418E-4 20 6.294923458976509E-4 21 0.0 22 1.049153909829418E-4 23 6.294923458976509E-4 24 4.196615639317672E-4 25 0.0019933924286758943 26 0.004406446421283556 27 0.006924415804874159 28 0.004091700248334731 29 0.002727800165556487 30 0.0028327155565394287 31 0.006819500413891217 32 0.0030425463385053125 33 0.003881869466368847 34 0.0032523771204711963 35 0.0033572925114541377 36 0.006924415804874159 37 0.004091700248334731 38 0.0076588235417547525 39 0.004406446421283556 40 0.002727800165556487 41 0.0033572925114541377 42 9.442385188464763E-4 43 0.002098307819658836 44 0.0012589846917953017 45 0.0012589846917953017 46 9.442385188464763E-4 47 0.0016786462557270689 48 0.0019933924286758943 49 0.0 50 0.0014688154737611853 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 953149.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.337975435775725 #Duplication Level Percentage of deduplicated Percentage of total 1 78.30849563880646 45.68359094989242 2 12.968009198167396 15.130548041072064 3 3.8186968588883694 6.683251306515108 4 1.6445838094184682 3.837667595037162 5 0.8465420440107462 2.469277448442514 6 0.5178837761700632 1.8127374607677549 7 0.35748380814649633 1.4598417132836503 8 0.2590278071552332 1.2088926280803878 9 0.19965412941720345 1.04826759278328 >10 0.9518317052581302 9.828007155595051 >50 0.06834104953303484 2.8506893853321236 >100 0.05473766131490534 6.233777323552893 >500 0.00471251371353905 1.7534513996455516 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 1.049153909829418E-4 6 0.0 0.0 0.0 0.0 4.196615639317672E-4 7 0.0 0.0 0.0 0.0 4.196615639317672E-4 8 0.0 0.0 0.0 0.0 4.196615639317672E-4 9 0.0 0.0 0.0 0.0 4.196615639317672E-4 10 0.0 0.0 0.0 0.0 4.196615639317672E-4 11 0.0 0.0 0.0 1.049153909829418E-4 4.196615639317672E-4 12 0.0 0.0 0.0 1.049153909829418E-4 5.245769549147091E-4 13 0.0 0.0 0.0 1.049153909829418E-4 7.344077368805926E-4 14 0.0 0.0 0.0 2.098307819658836E-4 7.344077368805926E-4 15 0.0 0.0 0.0 2.098307819658836E-4 8.393231278635344E-4 16 0.0 0.0 0.0 2.098307819658836E-4 8.393231278635344E-4 17 0.0 0.0 0.0 3.147461729488254E-4 9.442385188464762E-4 18 0.0 0.0 0.0 3.147461729488254E-4 9.442385188464762E-4 19 0.0 0.0 0.0 4.196615639317672E-4 9.442385188464762E-4 20 0.0 0.0 0.0 5.245769549147091E-4 0.0012589846917953017 21 0.0 0.0 0.0 7.344077368805926E-4 0.0012589846917953017 22 0.0 0.0 0.0 0.0011540693008123598 0.0012589846917953017 23 0.0 0.0 0.0 0.0019933924286758943 0.0012589846917953017 24 0.0 0.0 0.0 0.003252377120471196 0.0012589846917953017 25 0.0 0.0 0.0 0.003986784857351789 0.0012589846917953017 26 0.0 0.0 0.0 0.004826107985215323 0.0012589846917953017 27 0.0 0.0 0.0 0.005875261895044741 0.0012589846917953017 28 0.0 0.0 0.0 0.009337469797481821 0.0012589846917953017 29 0.0 0.0 0.0 0.014688154737611854 0.0012589846917953017 30 0.0 0.0 0.0 0.026228847745735452 0.0012589846917953017 31 0.0 0.0 0.0 0.05161837236360737 0.0012589846917953017 32 0.0 0.0 0.0 0.0787914586281893 0.0014688154737611853 33 0.0 0.0 0.0 0.1011384369075559 0.0014688154737611853 34 0.0 0.0 0.0 0.12317066901397368 0.0015737308647441272 35 0.0 0.0 0.0 0.15391087857197563 0.0015737308647441272 36 0.0 0.0 0.0 0.2015424660782312 0.0015737308647441272 37 0.0 0.0 0.0 0.26910797787124574 0.0015737308647441272 38 0.0 0.0 0.0 0.3637416605378592 0.0015737308647441272 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCG 260 0.0 20.305393 8 CTATACT 120 1.4322723E-8 20.164383 4 ATACCGT 275 0.0 19.197824 6 TACCGTC 275 0.0 19.197824 7 TCTATAC 105 1.79382E-6 18.855007 3 GTCTAGT 70 8.1306574E-4 18.854017 1 CGTCGTA 270 0.0 18.740583 10 TATACTC 130 3.5895937E-8 18.613277 5 ACCGCCT 95 1.5980906E-5 18.524218 8 CAATACT 95 1.5980906E-5 18.524218 4 TACGCTC 60 0.0074023693 18.337029 34 GATTTCG 120 3.1639865E-7 18.331257 41 GTGTAAG 180 1.4551915E-11 18.330296 1 GTATCAA 1895 0.0 18.22389 1 GTATAAT 145 6.315531E-9 18.20388 1 GTATAAA 145 6.315531E-9 18.20388 1 ACGCTAT 280 0.0 18.071276 10 ATTTCGT 110 2.796789E-6 17.998905 42 ATGGGTG 370 0.0 17.835817 5 TAATACC 100 2.4845367E-5 17.598007 4 >>END_MODULE