##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064033_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 857599 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.188905304227266 32.0 32.0 32.0 32.0 32.0 2 30.813357991322285 32.0 32.0 32.0 32.0 32.0 3 30.83567378226887 32.0 32.0 32.0 32.0 32.0 4 30.86457773388262 32.0 32.0 32.0 32.0 32.0 5 30.782569709153112 32.0 32.0 32.0 32.0 32.0 6 34.404384799888994 36.0 36.0 36.0 32.0 36.0 7 34.33658854546239 36.0 36.0 36.0 32.0 36.0 8 34.29023354738054 36.0 36.0 36.0 32.0 36.0 9 34.42332022308795 36.0 36.0 36.0 32.0 36.0 10 34.13943229877833 36.0 36.0 36.0 32.0 36.0 11 34.40319310073822 36.0 36.0 36.0 32.0 36.0 12 34.21950468692244 36.0 36.0 36.0 32.0 36.0 13 34.31057289012697 36.0 36.0 36.0 32.0 36.0 14 34.2167691426879 36.0 36.0 36.0 32.0 36.0 15 34.15015525904298 36.0 36.0 36.0 32.0 36.0 16 34.16004566236668 36.0 36.0 36.0 32.0 36.0 17 34.085703224933795 36.0 36.0 36.0 32.0 36.0 18 34.07619528474264 36.0 36.0 36.0 32.0 36.0 19 34.077500090368574 36.0 36.0 36.0 32.0 36.0 20 34.05489278788804 36.0 36.0 36.0 32.0 36.0 21 34.02768893154027 36.0 36.0 36.0 32.0 36.0 22 34.011528698144474 36.0 36.0 36.0 32.0 36.0 23 33.95822289904722 36.0 36.0 36.0 32.0 36.0 24 33.940461684307 36.0 36.0 36.0 32.0 36.0 25 33.55020469939914 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 6.0 5 8.0 6 36.0 7 14.0 8 45.0 9 60.0 10 75.0 11 24.0 12 45.0 13 51.0 14 84.0 15 162.0 16 251.0 17 320.0 18 406.0 19 613.0 20 861.0 21 1317.0 22 2040.0 23 3161.0 24 4692.0 25 6778.0 26 9846.0 27 13099.0 28 17679.0 29 24185.0 30 31793.0 31 43179.0 32 61161.0 33 86330.0 34 181722.0 35 367553.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.32361092965528 17.531588868773213 11.209849008006868 25.934951193564643 2 16.114418317192484 20.02215601331693 38.358589245004694 25.504836424485894 3 18.440323325419666 24.53334235087245 28.968105897004154 28.058228426703728 4 12.01681955938445 15.535120625299538 36.72177179085629 35.72628802445973 5 13.86739932036729 37.33361942900591 34.22384498590124 14.575136264725568 6 33.37049640692166 36.40566215967216 17.179019501283992 13.044821932122192 7 29.601270820236554 30.66693569738243 21.560207091447506 18.17158639093351 8 27.662239952408445 33.86010649776331 19.67794049889478 18.79971305093346 9 27.479214229634497 13.664303538159839 18.837676753418407 40.01880547878726 10 15.486756122004916 26.848385218751787 32.41754587784808 25.24731278139522 11 37.15864080501677 20.609012687764327 23.48560595012396 18.74674055709494 12 24.66063665194167 23.595933007096466 29.850206406657286 21.893223934304576 13 29.560270182918362 19.571343062065296 25.73295109147785 25.13543566353849 14 22.942565699043424 20.35357648766531 25.672276065501848 31.031581747789417 15 24.619197242702178 28.64453470015903 22.487168507626556 24.249099549512234 16 24.979609648749218 25.528953131946285 25.320907373547737 24.170529845756768 17 23.13645644944869 26.342570445131557 26.288431246718396 24.23254185870136 18 24.204451964874405 24.8379963240657 27.862298334159934 23.09525337689996 19 25.389598038677995 24.909886309136926 25.566149691997296 24.13436596018778 20 25.40345120133875 24.641885639132756 25.617590460708655 24.337072698819842 21 26.4807679292004 24.294419537104677 24.62057473329957 24.604237800395353 22 25.445513243159034 24.95165899784464 25.238845977456815 24.363981781539515 23 23.674705473896733 24.814298301405675 25.991819205611023 25.519177019086577 24 24.571079146429415 25.397762679742986 25.881472906392446 24.149685267435157 25 24.277557155343736 25.00738109436248 26.099666362865104 24.615395387428684 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 103.0 1 103.0 2 260.5 3 418.0 4 418.0 5 418.0 6 1323.0 7 2228.0 8 2228.0 9 2228.0 10 2156.0 11 2084.0 12 2084.0 13 2084.0 14 2230.0 15 2376.0 16 2376.0 17 2376.0 18 4101.0 19 5826.0 20 5826.0 21 5826.0 22 9958.5 23 14091.0 24 14091.0 25 14091.0 26 21766.5 27 29442.0 28 29442.0 29 29442.0 30 37388.0 31 45334.0 32 45334.0 33 45334.0 34 53410.0 35 61486.0 36 61486.0 37 61486.0 38 67709.5 39 73933.0 40 73933.0 41 73933.0 42 82726.5 43 91520.0 44 91520.0 45 91520.0 46 102250.0 47 112980.0 48 112980.0 49 112980.0 50 112072.5 51 111165.0 52 111165.0 53 111165.0 54 100964.5 55 90764.0 56 90764.0 57 90764.0 58 83095.0 59 75426.0 60 75426.0 61 75426.0 62 66868.5 63 58311.0 64 58311.0 65 58311.0 66 48229.0 67 38147.0 68 38147.0 69 38147.0 70 28765.0 71 19383.0 72 19383.0 73 19383.0 74 14939.5 75 10496.0 76 10496.0 77 10496.0 78 8624.5 79 6753.0 80 6753.0 81 6753.0 82 4657.0 83 2561.0 84 2561.0 85 2561.0 86 1993.0 87 1425.0 88 1425.0 89 1425.0 90 1025.5 91 626.0 92 626.0 93 626.0 94 433.0 95 240.0 96 240.0 97 240.0 98 360.5 99 481.0 100 481.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03906254554867718 2 0.005130602997438197 3 0.0012826507493595492 4 0.003031719953031662 5 0.008978555245516844 6 0.013642739788642477 7 0.023320922715628165 8 0.03544780252775481 9 0.046875054658412615 10 0.056669842198976444 11 0.05527058683603875 12 0.06448235130871188 13 0.06413253746797747 14 0.06821369894321239 15 0.06156723596925836 16 0.06716425742100912 17 0.06401593285439931 18 0.07859150955166692 19 0.07299448809991615 20 0.07929113723313577 21 0.07520997575790084 22 0.0776586726430418 23 0.08325569409479255 24 0.07940774184671391 25 0.07929113723313577 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 857599.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.266140758545596 #Duplication Level Percentage of deduplicated Percentage of total 1 79.1787774716054 42.17547905892092 2 12.601399305691238 13.424558183431765 3 3.6915424391998917 5.899026575476984 4 1.4967030200974114 3.1889437496899604 5 0.7713934362735467 2.0544575678382455 6 0.46128511616104745 1.4742526756353844 7 0.3115174366925644 1.1615332142125214 8 0.21033638794382964 0.8963046117488067 9 0.15617763048468755 0.748708168386014 >10 0.9013622644449295 8.879469561877302 >50 0.10161560042050671 3.7697609323868617 >100 0.10623286818695667 11.421498291138386 >500 0.010557303666060686 4.0442109028452125 >1k 0.0010997191318813215 0.8617965064116276 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2013 0.2347250871327975 No Hit TATCAACGCAGAGTACTTTTTTTTT 1634 0.19053193858668213 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1610 0.18773342786080674 No Hit GAATAGGACCGCGGTTCTATTTTGT 1051 0.12255144887062602 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1048 0.12220163502989159 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1000 0.11660461357814082 No Hit GATTAAGAGGGACGGCCGGGGGCAT 999 0.1164880089645627 No Hit GTCCTAAAGTGTGTATTTCTCATTT 983 0.11462233514731243 No Hit GTATCTGATCGTCTTCGAACCTCCG 955 0.1113574059671245 No Hit CTATTGGAGCTGGAATTACCGCGGC 943 0.1099581506041868 No Hit GCGCAAGACGGACCAGAGCGAAAGC 929 0.10832568601409284 No Hit GTCCTATTCCATTATTCCTAGCTGC 926 0.1079758721733584 No Hit GAATAACGCCGCCGCATCGCCAGTC 915 0.10669322142399887 No Hit GAACTACGACGGTATCTGATCGTCT 904 0.1054105706746393 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 874 0.10191243226729509 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1660461357814083E-4 2 0.0 0.0 0.0 0.0 1.1660461357814083E-4 3 0.0 0.0 0.0 0.0 1.1660461357814083E-4 4 0.0 0.0 0.0 0.0 1.1660461357814083E-4 5 0.0 0.0 0.0 0.0 1.1660461357814083E-4 6 0.0 0.0 0.0 0.0 1.1660461357814083E-4 7 0.0 0.0 0.0 0.0 1.1660461357814083E-4 8 0.0 0.0 0.0 0.0 1.1660461357814083E-4 9 0.0 0.0 0.0 0.0 1.1660461357814083E-4 10 0.0 0.0 0.0 0.0 1.1660461357814083E-4 11 0.0 0.0 0.0 1.1660461357814083E-4 1.1660461357814083E-4 12 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 5.830230678907041E-4 13 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 6.99627681468845E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATTCGT 25 0.0060243546 19.003036 15 TTCGTAC 30 7.710575E-4 19.003035 17 CGCATCG 175 0.0 14.658629 13 CATCGCC 185 0.0 14.380675 15 GTACGAA 40 0.005268913 14.253109 19 GCCGCGT 40 0.0052770814 14.249782 8 CGCGTAT 40 0.0052770814 14.249782 7 ATCGCCA 205 0.0 13.90466 16 GCATCGC 185 0.0 13.86627 14 GGGTCGC 90 3.631976E-8 13.722012 6 TCCTATA 70 7.280889E-6 13.566469 2 CCGCATC 190 0.0 13.5013685 12 CGCGTAA 85 2.6947419E-7 13.411558 10 TCGCGTA 85 2.6947419E-7 13.411558 9 TCGCCAG 200 0.0 13.302125 17 CCGACCA 150 0.0 13.299796 9 CTCCTAA 50 0.0015033833 13.294366 1 GCTCGTA 80 1.996761E-6 13.0623 9 GCGTAAC 80 1.996761E-6 13.0623 11 CCGTCAA 175 0.0 13.031414 18 >>END_MODULE