##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064033_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 857599 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.245836340760658 32.0 32.0 32.0 32.0 32.0 2 31.303128851596142 32.0 32.0 32.0 32.0 32.0 3 31.406354251812328 32.0 32.0 32.0 32.0 32.0 4 31.512860905854602 32.0 32.0 32.0 32.0 32.0 5 31.441732091571936 32.0 32.0 32.0 32.0 32.0 6 35.01516676208811 36.0 36.0 36.0 36.0 36.0 7 35.03120339459351 36.0 36.0 36.0 36.0 36.0 8 34.97413942880064 36.0 36.0 36.0 36.0 36.0 9 35.10212581871014 36.0 36.0 36.0 36.0 36.0 10 34.92843625050869 36.0 36.0 36.0 32.0 36.0 11 35.10071723497812 36.0 36.0 36.0 36.0 36.0 12 34.980879175465454 36.0 36.0 36.0 36.0 36.0 13 35.0494881640487 36.0 36.0 36.0 36.0 36.0 14 34.97727376081362 36.0 36.0 36.0 36.0 36.0 15 34.94563892914987 36.0 36.0 36.0 36.0 36.0 16 34.96135489896793 36.0 36.0 36.0 36.0 36.0 17 34.92954516038382 36.0 36.0 36.0 36.0 36.0 18 34.935516482645156 36.0 36.0 36.0 36.0 36.0 19 34.92260951796819 36.0 36.0 36.0 32.0 36.0 20 34.90268178950768 36.0 36.0 36.0 32.0 36.0 21 34.90830563002056 36.0 36.0 36.0 32.0 36.0 22 34.88108661507301 36.0 36.0 36.0 32.0 36.0 23 34.83599910914075 36.0 36.0 36.0 32.0 36.0 24 34.797624530812186 36.0 36.0 36.0 32.0 36.0 25 34.76639548320369 36.0 36.0 36.0 32.0 36.0 26 34.70518039316744 36.0 36.0 36.0 32.0 36.0 27 34.68970462885334 36.0 36.0 36.0 32.0 36.0 28 34.666454834952 36.0 36.0 36.0 32.0 36.0 29 34.625899750349525 36.0 36.0 36.0 32.0 36.0 30 34.60971852812328 36.0 36.0 36.0 32.0 36.0 31 34.59269308849474 36.0 36.0 36.0 32.0 36.0 32 34.55003445666331 36.0 36.0 36.0 32.0 36.0 33 34.52429049007753 36.0 36.0 36.0 32.0 36.0 34 34.51819789901807 36.0 36.0 36.0 32.0 36.0 35 34.46135781408327 36.0 36.0 36.0 32.0 36.0 36 34.437224157211006 36.0 36.0 36.0 32.0 36.0 37 34.41735006687274 36.0 36.0 36.0 32.0 36.0 38 34.357543560568516 36.0 36.0 36.0 32.0 36.0 39 34.33607198702424 36.0 36.0 36.0 32.0 36.0 40 34.32095769701224 36.0 36.0 36.0 32.0 36.0 41 34.297903798861704 36.0 36.0 36.0 32.0 36.0 42 34.209727390073915 36.0 36.0 36.0 32.0 36.0 43 34.21394614499317 36.0 36.0 36.0 32.0 36.0 44 34.12881778080432 36.0 36.0 36.0 32.0 36.0 45 34.085800006763066 36.0 36.0 36.0 32.0 36.0 46 34.06257819796898 36.0 36.0 36.0 32.0 36.0 47 34.01916979847225 36.0 36.0 36.0 32.0 36.0 48 33.967854440128775 36.0 36.0 36.0 32.0 36.0 49 33.94773081591746 36.0 36.0 36.0 32.0 36.0 50 33.3341480109002 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 3.0 20 7.0 21 32.0 22 91.0 23 300.0 24 782.0 25 1785.0 26 3653.0 27 6577.0 28 11253.0 29 17032.0 30 24385.0 31 34624.0 32 49705.0 33 79858.0 34 161182.0 35 466327.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38165411710103 18.413985234387482 11.764561830273587 26.439798818237897 2 15.454111896380235 20.870059013732558 37.8096005466437 25.8662285432435 3 17.77520729385179 25.21423182629644 29.372119137265784 27.63844174258599 4 11.756310350175315 16.169678369494367 37.05624656745169 35.01776471287863 5 13.56169958220567 37.752026296672454 33.904074048593806 14.78220007252807 6 33.63802154389353 36.78028633462298 16.811606370350678 12.770085751132815 7 29.508299945428853 30.982187416918922 21.404250952663027 18.105261684989202 8 27.622117096685045 33.948617010980655 19.563922066140467 18.86534382619383 9 27.606399787311204 13.423415124459096 18.751596040536807 40.2185890476929 10 15.435365892053184 27.176304733386274 32.217414169258234 25.170915205302308 11 37.37632623172368 20.615928889842454 23.380507673166598 18.627237205267264 12 24.526847629253297 23.741865370645254 29.76869142804504 21.962595572056404 13 29.67096395039156 19.640133582712608 25.756766589396406 24.932135877499427 14 23.042354293789987 20.29888094552349 25.624680066091493 31.034084694595027 15 24.734304924891727 28.688188142664906 22.269876696961852 24.30763023548152 16 25.000932844522804 25.72563643317568 25.14365805651172 24.12977266578979 17 23.335265083098278 26.46971370069228 25.963766282376728 24.231254933832712 18 24.347973110850692 24.87409558124756 27.643351465435316 23.134579842466433 19 25.530113724479627 24.882841514507362 25.573957059185005 24.01308770182801 20 25.658035123969352 24.62805696421721 25.497235861850232 24.21667204996321 21 26.684616003516798 24.284426637624346 24.473792530075244 24.557164828783616 22 25.492013740703683 25.01218519632742 25.195371257862075 24.30042980510682 23 23.728977596703345 24.78984884508691 26.056177901741727 25.424995656468013 24 24.79573691544377 25.25959223176441 25.775336843148573 24.169334009643244 25 24.583393094312736 24.946506635509333 25.998066659437047 24.472033610740883 26 23.807369297470256 26.018764911527846 26.50747821138629 23.666387579615606 27 24.66307890548018 25.368464628678378 25.468401075162234 24.500055390679208 28 23.742690058479532 25.43130841393947 26.203028341874962 24.62297318570604 29 24.16161460683722 24.921668293354134 25.86561345941036 25.05110364039829 30 23.965213254225905 25.38515896115527 26.288527556998396 24.361100227620433 31 24.91612606802972 25.049414777438173 25.27762650474557 24.75683264978654 32 24.197996434114494 25.6399761652388 25.17995594533864 24.982071455308073 33 23.805936645462975 25.18054235588388 26.077627674026736 24.93589332462641 34 24.61816706196783 25.365041384183755 26.17803244967781 23.838759104170602 35 25.228319021609845 25.265517064456393 25.926919255759284 23.579244658174474 36 24.01241715965636 25.88222123488233 25.633131706088353 24.47222989937296 37 24.951548692689272 25.721055737077904 25.087515538235138 24.23988003199769 38 24.33813814584225 25.62180555377398 25.682327300205355 24.357729000178416 39 25.199926303048397 24.889979313545545 25.095327939773732 24.814766443632326 40 25.656325138937795 25.32842493627402 25.62495772979251 23.390292194995673 41 24.222190867440403 25.377316577441583 26.40265681245474 23.997835742663273 42 25.606327565559404 26.396573618118875 25.266534589735546 22.73056422658618 43 24.324084806280013 25.30801862920924 25.846745135719434 24.521151428791317 44 23.999631522976177 25.96468684117241 25.218870687885968 24.816810947965447 45 24.28575259946291 26.110186676243995 25.256039954243388 24.34802077004971 46 24.15571149715597 25.37634709521844 25.382760446182655 25.085180961442934 47 24.85097600223886 25.25397047505772 25.72296462137643 24.17208890132699 48 25.261491029429255 25.89769841251332 24.471129291426358 24.369681266631062 49 24.389572712559293 26.022742643389197 24.949743235742705 24.63794140830881 50 24.395835301059133 26.535321698389318 24.48818723187914 24.580655768672404 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 23.5 2 24.0 3 71.5 4 119.0 5 133.5 6 148.0 7 153.5 8 159.0 9 220.0 10 281.0 11 403.5 12 526.0 13 949.5 14 1373.0 15 1833.5 16 2294.0 17 2570.0 18 2846.0 19 2897.0 20 2948.0 21 3383.5 22 3819.0 23 4248.5 24 4678.0 25 5474.0 26 6270.0 27 8183.5 28 10097.0 29 11843.5 30 13590.0 31 15347.0 32 17104.0 33 20567.0 34 24030.0 35 28235.5 36 32441.0 37 35859.0 38 39277.0 39 40510.5 40 41744.0 41 43846.5 42 45949.0 43 45611.5 44 45274.0 45 49671.0 46 54068.0 47 57430.0 48 60792.0 49 62695.0 50 64598.0 51 61057.0 52 57516.0 53 56409.5 54 55303.0 55 55887.0 56 56471.0 57 54932.5 58 53394.0 59 48742.5 60 44091.0 61 38776.0 62 33461.0 63 29032.5 64 24604.0 65 21010.0 66 17416.0 67 14935.5 68 12455.0 69 11489.5 70 10524.0 71 8282.0 72 6040.0 73 5232.0 74 4424.0 75 3479.5 76 2535.0 77 2195.5 78 1856.0 79 1560.0 80 1264.0 81 998.5 82 733.0 83 650.0 84 567.0 85 398.0 86 229.0 87 166.0 88 103.0 89 73.5 90 44.0 91 39.5 92 35.0 93 24.5 94 14.0 95 17.0 96 20.0 97 16.0 98 12.0 99 14.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007695904496157295 2 2.3320922715628167E-4 3 0.0 4 0.0 5 0.0 6 1.1660461357814083E-4 7 3.498138407344225E-4 8 0.0 9 9.328369086251267E-4 10 0.0011660461357814085 11 0.0 12 0.0 13 3.498138407344225E-4 14 0.0 15 0.004314370702391211 16 8.162322950469858E-4 17 0.0 18 4.6641845431256334E-4 19 0.0 20 9.328369086251267E-4 21 0.0 22 1.1660461357814083E-4 23 2.3320922715628167E-4 24 4.6641845431256334E-4 25 0.0018656738172502533 26 0.004780789156703774 27 0.006296649133219604 28 0.003964556861656789 29 0.0032649291801879433 30 0.003614743020922366 31 0.007229486041844732 32 0.0032649291801879433 33 0.005130602997438197 34 0.0029151153394535207 35 0.003148324566609802 36 0.008861950631938703 37 0.004314370702391211 38 0.006529858360375887 39 0.0038479522480786474 40 0.0024486968851409573 41 0.003498138407344225 42 0.002098883044406535 43 0.0024486968851409573 44 0.0017490692036721124 45 0.002098883044406535 46 0.001515859976515831 47 0.002215487657984676 48 0.0019822784308283943 49 3.498138407344225E-4 50 0.0011660461357814085 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 857599.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.64641118412601 #Duplication Level Percentage of deduplicated Percentage of total 1 80.10170653893029 46.175759116933705 2 12.396296795126183 14.29204044424615 3 3.4725915092303072 6.005473140467851 4 1.3409333612603143 3.091999836548971 5 0.7091305421818243 2.0439415408917827 6 0.41962254550913086 1.4513840280329395 7 0.27573614576159405 1.112663946582927 8 0.1972837658502893 0.9098160868926891 9 0.1518871356785864 0.7880173449216235 >10 0.7581302888181759 8.070206937413204 >50 0.0858006070094094 3.451932266881156 >100 0.08356150844545261 9.555282087797066 >500 0.006912630854151569 2.809342942106608 >1k 4.06625344361857E-4 0.24214028028336468 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1037 0.12091898428053204 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1029 0.11998614737190691 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1000 0.11660461357814082 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1000 0.11660461357814082 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 911 0.10622680296968628 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 900 0.10494415222032676 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 882 0.10284526917592023 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 878 0.10237885072160766 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 1.1660461357814083E-4 0.0 0.0 0.0 10 0.0 1.1660461357814083E-4 0.0 0.0 0.0 11 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 0.0 12 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 0.0 13 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 0.0 14 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 0.0 15 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 1.1660461357814083E-4 16 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 1.1660461357814083E-4 17 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 1.1660461357814083E-4 18 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 1.1660461357814083E-4 19 0.0 1.1660461357814083E-4 0.0 1.1660461357814083E-4 1.1660461357814083E-4 20 0.0 1.1660461357814083E-4 0.0 3.498138407344225E-4 2.3320922715628167E-4 21 0.0 1.1660461357814083E-4 0.0 3.498138407344225E-4 2.3320922715628167E-4 22 0.0 1.1660461357814083E-4 0.0 6.99627681468845E-4 2.3320922715628167E-4 23 0.0 1.1660461357814083E-4 0.0 0.0011660461357814083 2.3320922715628167E-4 24 0.0 1.1660461357814083E-4 0.0 0.0016324645900939717 2.3320922715628167E-4 25 0.0 1.1660461357814083E-4 0.0 0.0019822784308283943 2.3320922715628167E-4 26 0.0 1.1660461357814083E-4 0.0 0.0025653014987190984 2.3320922715628167E-4 27 0.0 1.1660461357814083E-4 0.0 0.0037313476345005067 2.3320922715628167E-4 28 0.0 1.1660461357814083E-4 0.0 0.005363812224594478 2.3320922715628167E-4 29 0.0 1.1660461357814083E-4 0.0 0.00979478754056383 2.3320922715628167E-4 30 0.0 1.1660461357814083E-4 0.0 0.01539180899231459 2.3320922715628167E-4 31 0.0 1.1660461357814083E-4 0.0 0.028334921099488222 2.3320922715628167E-4 32 0.0 1.1660461357814083E-4 0.0 0.04419314854611538 2.3320922715628167E-4 33 0.0 1.1660461357814083E-4 0.0 0.05970156215200811 2.3320922715628167E-4 34 0.0 1.1660461357814083E-4 0.0 0.07590960343936969 2.3320922715628167E-4 35 0.0 1.1660461357814083E-4 0.0 0.0947995508390285 2.3320922715628167E-4 36 0.0 1.1660461357814083E-4 0.0 0.12465033191503255 2.3320922715628167E-4 37 0.0 1.1660461357814083E-4 0.0 0.16569515589453812 2.3320922715628167E-4 38 0.0 1.1660461357814083E-4 0.0 0.2230646257749834 2.3320922715628167E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAG 245 0.0 21.548306 1 GTCCTAC 485 0.0 20.409801 1 GTCCTAA 355 0.0 19.82849 1 CCCGTCG 100 1.1227567E-6 19.799816 41 TCCTACA 605 0.0 19.633892 2 TTAGGAC 450 0.0 19.553095 3 TAGGACA 320 0.0 19.247576 4 TAGGACG 585 0.0 19.177073 4 GATATAC 230 0.0 19.128027 1 ATGTCGA 70 8.1275724E-4 18.854769 17 GAGTATA 60 0.0074157706 18.331028 1 CCTACAG 600 0.0 18.331026 3 CGACGGT 315 0.0 18.156445 7 GATATAA 85 1.4315988E-4 18.115366 1 CTATATA 110 2.797864E-6 17.997734 1 TACTATA 110 2.797864E-6 17.997734 2 AGGACGT 640 0.0 17.87275 5 TACGACG 320 0.0 17.87275 5 GTAGGAC 690 0.0 17.852825 3 GGACGTG 620 0.0 17.7397 6 >>END_MODULE