##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064031_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 927795 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34572615717912 32.0 32.0 32.0 32.0 32.0 2 31.504736498903313 32.0 32.0 32.0 32.0 32.0 3 31.56299613599987 32.0 32.0 32.0 32.0 32.0 4 31.626336636864824 32.0 32.0 32.0 32.0 32.0 5 31.610371903276047 32.0 32.0 32.0 32.0 32.0 6 35.21505936117354 36.0 36.0 36.0 36.0 36.0 7 35.22591736321062 36.0 36.0 36.0 36.0 36.0 8 35.17886925452282 36.0 36.0 36.0 36.0 36.0 9 35.278585247818754 36.0 36.0 36.0 36.0 36.0 10 35.171686633361894 36.0 36.0 36.0 36.0 36.0 11 35.275414288716796 36.0 36.0 36.0 36.0 36.0 12 35.22353106020188 36.0 36.0 36.0 36.0 36.0 13 35.24281118134933 36.0 36.0 36.0 36.0 36.0 14 35.206248147489475 36.0 36.0 36.0 36.0 36.0 15 35.19002473606778 36.0 36.0 36.0 36.0 36.0 16 35.20252534234395 36.0 36.0 36.0 36.0 36.0 17 35.2092703668375 36.0 36.0 36.0 36.0 36.0 18 35.19770207858417 36.0 36.0 36.0 36.0 36.0 19 35.17115095468288 36.0 36.0 36.0 36.0 36.0 20 35.15768677347906 36.0 36.0 36.0 36.0 36.0 21 35.13691171002215 36.0 36.0 36.0 36.0 36.0 22 35.10978826141551 36.0 36.0 36.0 36.0 36.0 23 35.10307449382676 36.0 36.0 36.0 36.0 36.0 24 35.09135099887367 36.0 36.0 36.0 36.0 36.0 25 35.04679374215209 36.0 36.0 36.0 36.0 36.0 26 35.01631502648753 36.0 36.0 36.0 36.0 36.0 27 34.96003319698856 36.0 36.0 36.0 36.0 36.0 28 34.918778393934005 36.0 36.0 36.0 36.0 36.0 29 34.893743768828244 36.0 36.0 36.0 36.0 36.0 30 34.85266896243243 36.0 36.0 36.0 36.0 36.0 31 34.83590987233171 36.0 36.0 36.0 36.0 36.0 32 34.80470578091065 36.0 36.0 36.0 36.0 36.0 33 34.83416918608098 36.0 36.0 36.0 36.0 36.0 34 34.80946221956359 36.0 36.0 36.0 36.0 36.0 35 34.78798764813348 36.0 36.0 36.0 36.0 36.0 36 34.72473229538853 36.0 36.0 36.0 32.0 36.0 37 34.6400390172398 36.0 36.0 36.0 32.0 36.0 38 34.60593018931984 36.0 36.0 36.0 32.0 36.0 39 34.45494532736219 36.0 36.0 36.0 32.0 36.0 40 34.53468061371316 36.0 36.0 36.0 32.0 36.0 41 34.5152873210138 36.0 36.0 36.0 32.0 36.0 42 34.50131225108995 36.0 36.0 36.0 32.0 36.0 43 34.4949886558992 36.0 36.0 36.0 32.0 36.0 44 34.389863062422194 36.0 36.0 36.0 32.0 36.0 45 34.3606583350848 36.0 36.0 36.0 32.0 36.0 46 34.20385537753491 36.0 36.0 36.0 32.0 36.0 47 34.21662112858983 36.0 36.0 36.0 32.0 36.0 48 34.15471413404901 36.0 36.0 36.0 32.0 36.0 49 34.09623462079446 36.0 36.0 36.0 32.0 36.0 50 33.66561794361901 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 2.0 18 2.0 19 1.0 20 4.0 21 11.0 22 56.0 23 183.0 24 465.0 25 1233.0 26 2657.0 27 5533.0 28 9431.0 29 15048.0 30 21566.0 31 31044.0 32 44983.0 33 72106.0 34 148902.0 35 574567.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.96865423399593 21.938802458077195 13.01496038123695 25.077582926689928 2 10.934551133711938 22.63479030344053 47.30246940858575 19.12818915426178 3 17.13325831651922 29.244593615810437 31.21389276906893 22.40825529860141 4 9.84430827930739 18.90493050727801 42.047758394904044 29.203002818510555 5 9.345167844189719 42.35774066469425 37.30134350799476 10.995747983121271 6 27.585385517443566 41.59326659423664 19.945311017986793 10.876036870333007 7 24.97116816879609 33.648417644434005 24.536588941079593 16.843825245690315 8 21.836720396208214 43.37854806288027 21.140661460775277 13.644070080136236 9 26.775678874223154 14.85256298327416 21.935015186691757 36.43674295581093 10 13.752617788350127 31.329712531001192 36.536079940762264 18.381589739886415 11 32.2767769569538 22.291909626490362 29.063348113913218 16.367965302642613 12 24.19893230494302 25.427439094711858 35.214967131677 15.15866146866812 13 29.37260789852909 24.71833695662718 27.03383190000356 18.875223244840175 14 18.15476479179129 25.78522195096977 29.691365010589628 26.36864824664931 15 19.198213317553268 39.064384593744236 23.773353468002796 17.964048620699693 16 17.387827162915627 29.889942411350884 34.195348716892994 18.5268817088405 17 17.5794221783907 32.838396413000716 31.171541127080875 18.41064028152771 18 17.736734095573144 28.957891423939845 36.972834428406365 16.33254005208064 19 22.748045363518195 26.98756404977829 29.502777556224764 20.76161303047875 20 23.425045996449622 29.60727061864282 30.726598396833765 16.241084988073798 21 20.81569743316142 27.91748177129646 28.34710253881515 22.91971825672697 22 22.128056305541634 32.73266184879203 28.708173680608322 16.431108165058014 23 18.30933542001468 32.62692271626415 31.14641367811 17.91732818561117 24 22.096834517330986 28.35536959373306 32.25496314355958 17.292832745376373 25 19.821768667888936 30.96133470865493 31.591007811093757 17.625888812362373 26 16.55575173163113 32.51057949550412 32.80247224970843 18.131196523156323 27 18.193821962666185 31.87171378126152 31.268741821505643 18.665722434566657 28 17.26465011851164 32.49633255259729 29.526589397870346 20.71242793102073 29 19.69380474124086 29.880768376781415 29.130909036036794 21.29451784594093 30 17.692621104301356 30.22848729296775 31.212907732006546 20.865983870724353 31 21.530572868048264 28.534964288717045 30.63829741365372 19.296165429580974 32 18.65071580549406 31.93294429845457 30.631861913456625 18.78447798259475 33 17.22354980258754 32.55694134106815 32.868662240919726 17.35084661542458 34 19.008610979672742 31.70207239086454 32.44956449288562 16.8397521365771 35 17.91065046153581 32.571903441793886 31.7652397356247 17.7522063610456 36 16.984742081350415 31.279757253035683 33.29212096387361 18.443379701740298 37 17.684511420505928 31.13323366686032 29.34980021794406 21.832454694689687 38 18.813805413900486 33.63762674850144 29.256362082216352 18.292205755381723 39 21.328783261888155 29.30150439072553 30.374744947728434 18.994967399657884 40 22.190461408455562 29.08227056764191 31.419492804235542 17.307775219666986 41 21.63016297318272 28.059735276364577 32.457855479865486 17.852246270587223 42 19.374504190666713 32.3432595798986 31.376862518538957 16.90537371089573 43 17.096386516127293 32.86583492764949 32.145293848185176 17.892484708038047 44 16.707750444879654 32.40955011915553 31.058905191861424 19.82379424410339 45 17.258918264644795 32.769913784090534 30.675898670707824 19.29526928055685 46 18.489756236365363 29.37591077233494 31.110366205927242 21.02396678537246 47 21.367880651583203 29.59070718959743 30.243993399233215 18.797418759586147 48 17.54463116437138 30.82398566025452 30.37753928501753 21.253843890356563 49 20.456137703575163 29.533299561323144 30.02629905474299 19.9842636803587 50 18.034742888184464 33.52913977022743 29.05774709065766 19.37837025093044 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 6.5 2 7.0 3 37.5 4 68.0 5 92.0 6 116.0 7 128.5 8 141.0 9 204.0 10 267.0 11 420.5 12 574.0 13 1122.5 14 1671.0 15 2316.5 16 2962.0 17 3426.0 18 3890.0 19 4328.5 20 4767.0 21 5652.0 22 6537.0 23 8320.0 24 10103.0 25 12451.0 26 14799.0 27 20385.5 28 25972.0 29 33673.0 30 41374.0 31 51680.5 32 61987.0 33 76757.5 34 91528.0 35 106354.0 36 121180.0 37 119175.5 38 117171.0 39 106722.0 40 96273.0 41 86419.5 42 76566.0 43 68576.5 44 60587.0 45 54440.5 46 48294.0 47 43911.5 48 39529.0 49 34998.5 50 30468.0 51 26491.0 52 22514.0 53 19335.0 54 16156.0 55 13594.5 56 11033.0 57 9297.0 58 7561.0 59 6312.0 60 5063.0 61 4173.5 62 3284.0 63 2600.5 64 1917.0 65 1596.5 66 1276.0 67 1049.5 68 823.0 69 665.5 70 508.0 71 409.0 72 310.0 73 267.0 74 224.0 75 175.0 76 126.0 77 97.0 78 68.0 79 55.5 80 43.0 81 31.5 82 20.0 83 16.0 84 12.0 85 8.5 86 5.0 87 3.0 88 1.0 89 3.0 90 5.0 91 3.5 92 2.0 93 2.5 94 3.0 95 2.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008407029570109777 2 2.1556486077204553E-4 3 3.2334729115806834E-4 4 0.0 5 0.0 6 3.2334729115806834E-4 7 1.0778243038602277E-4 8 0.0 9 9.700418734742049E-4 10 8.622594430881821E-4 11 1.0778243038602277E-4 12 2.1556486077204553E-4 13 2.1556486077204553E-4 14 0.0 15 0.0045268620762129565 16 8.622594430881821E-4 17 0.0 18 3.2334729115806834E-4 19 1.0778243038602277E-4 20 6.466945823161367E-4 21 0.0 22 0.0 23 6.466945823161367E-4 24 6.466945823161367E-4 25 0.0012933891646322733 26 0.006143598532003298 27 0.006143598532003298 28 0.004095732354668866 29 0.0022634310381064783 30 0.004419079645826934 31 0.008299247139723754 32 0.0031256904811946605 33 0.0045268620762129565 34 0.002802343190036592 35 0.002478995898878524 36 0.008622594430881822 37 0.0036646026331247743 38 0.007760334987793639 39 0.004742426936985002 40 0.002910125620422615 41 0.003772385063510797 42 0.002047866177334433 43 0.0021556486077204556 44 0.0017245188861763642 45 8.622594430881821E-4 46 0.0011856067342462505 47 0.0025867783292645467 48 0.0025867783292645467 49 5.389121519301139E-4 50 8.622594430881821E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 927795.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.07557120102072 #Duplication Level Percentage of deduplicated Percentage of total 1 83.72661249105735 59.50916807528418 2 11.3515858143576 16.13640891585741 3 2.700482601402875 5.758150302393832 4 0.8878467889056415 2.524168706418421 5 0.38509503699707237 1.3685424860622564 6 0.21567891883357543 0.9197701411268975 7 0.13141287946183464 0.6538171829644547 8 0.09623693002213299 0.547207581756461 9 0.0678482498677834 0.4340117802908056 >10 0.3807978638219846 4.962303117119292 >50 0.03247309590196756 1.6408992719868172 >100 0.01996651091188254 2.7818219214429156 >500 0.003048321890982536 1.4019064214616543 >1k 9.144965672947607E-4 1.361824095834515 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2822 0.30416201854935626 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2451 0.26417473687614185 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 2367 0.2551210127237159 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1974 0.21276251758200895 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1501 0.1617814280094202 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1456 0.15693121864204918 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 980 0.10562678177830231 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 929 0.10012987782861515 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 1.0778243038602278E-4 0.0 16 0.0 0.0 0.0 1.0778243038602278E-4 0.0 17 0.0 0.0 0.0 1.0778243038602278E-4 0.0 18 0.0 0.0 0.0 3.2334729115806834E-4 0.0 19 0.0 0.0 0.0 3.2334729115806834E-4 0.0 20 0.0 0.0 0.0 4.311297215440911E-4 0.0 21 0.0 0.0 0.0 5.389121519301139E-4 0.0 22 0.0 0.0 0.0 6.466945823161367E-4 0.0 23 0.0 0.0 0.0 9.70041873474205E-4 0.0 24 0.0 0.0 0.0 0.0018323013165623871 0.0 25 0.0 0.0 0.0 0.00194008374694841 0.0 26 0.0 0.0 0.0 0.0022634310381064783 0.0 27 0.0 0.0 0.0 0.002371213468492501 0.0 28 0.0 0.0 0.0 0.0042035147850548885 0.0 29 0.0 0.0 0.0 0.0076525525574076166 0.0 30 0.0 0.0 0.0 0.016382929418675463 0.0 31 0.0 0.0 0.0 0.040202846533986494 0.0 32 0.0 0.0 0.0 0.07221422835863527 0.0 33 0.0 0.0 0.0 0.1017466142844055 0.0 34 0.0 0.0 0.0 0.13214125965326393 0.0 35 0.0 0.0 0.0 0.16824837383258154 0.0 36 0.0 0.0 0.0 0.2200917228482585 0.0 37 0.0 0.0 0.0 0.30664101444823477 0.0 38 0.0 0.0 0.0 0.42487834058170176 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTAGG 35 7.2869134E-6 37.715626 1 GACGTGT 45 1.0370186E-6 34.221592 7 TAGGACC 1185 0.0 27.661938 4 GGCGTGC 50 8.340419E-5 26.399515 8 CGTGTAA 60 9.747098E-6 25.66758 9 TCGGAAA 60 9.751177E-6 25.666195 38 TTGCTCG 45 0.0013981189 24.443995 43 TCTCGCA 45 0.0013981189 24.443995 43 GTATCAA 2465 0.0 24.365978 1 AGGCGTG 55 1.5934272E-4 23.99956 7 TTGCGAG 65 1.8130597E-5 23.691872 18 GGACCTG 2235 0.0 22.83627 6 AGGACCT 2385 0.0 22.137959 5 TGCGTGT 60 2.87139E-4 22.000784 12 TCTTCGC 50 0.0025802653 21.999596 44 AAGGCGT 50 0.0025802653 21.999596 6 GACCTGG 2465 0.0 21.24099 7 TCCGTAA 75 5.4716507E-5 20.532957 26 TTAGGAC 2185 0.0 20.438982 3 TGTAGGA 3835 0.0 20.30732 2 >>END_MODULE