##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064030_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 544188 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.973448514116445 32.0 32.0 32.0 32.0 32.0 2 30.734428175556978 32.0 32.0 32.0 32.0 32.0 3 31.13135166523334 32.0 32.0 32.0 32.0 32.0 4 31.32529383227855 32.0 32.0 32.0 32.0 32.0 5 31.188580049541702 32.0 32.0 32.0 32.0 32.0 6 34.75430549736488 36.0 36.0 36.0 32.0 36.0 7 34.78997515564474 36.0 36.0 36.0 32.0 36.0 8 34.691055297066455 36.0 36.0 36.0 32.0 36.0 9 34.927197953648374 36.0 36.0 36.0 32.0 36.0 10 34.636355450689834 36.0 36.0 36.0 32.0 36.0 11 34.93859291274339 36.0 36.0 36.0 36.0 36.0 12 34.75825817548347 36.0 36.0 36.0 32.0 36.0 13 34.862586091571295 36.0 36.0 36.0 32.0 36.0 14 34.785710085485164 36.0 36.0 36.0 32.0 36.0 15 34.714793416980896 36.0 36.0 36.0 32.0 36.0 16 34.75852095231795 36.0 36.0 36.0 32.0 36.0 17 34.69020632575507 36.0 36.0 36.0 32.0 36.0 18 34.70404529317074 36.0 36.0 36.0 32.0 36.0 19 34.708016347291746 36.0 36.0 36.0 32.0 36.0 20 34.700654920725924 36.0 36.0 36.0 32.0 36.0 21 34.69204392599616 36.0 36.0 36.0 32.0 36.0 22 34.67475945812844 36.0 36.0 36.0 32.0 36.0 23 34.62183657118496 36.0 36.0 36.0 32.0 36.0 24 34.58260380603762 36.0 36.0 36.0 32.0 36.0 25 34.552353230868746 36.0 36.0 36.0 32.0 36.0 26 34.461138430101364 36.0 36.0 36.0 32.0 36.0 27 34.48305916337736 36.0 36.0 36.0 32.0 36.0 28 34.45399567796423 36.0 36.0 36.0 32.0 36.0 29 34.396135159172935 36.0 36.0 36.0 32.0 36.0 30 34.38560203459099 36.0 36.0 36.0 32.0 36.0 31 34.38056517233015 36.0 36.0 36.0 32.0 36.0 32 34.32936044161209 36.0 36.0 36.0 32.0 36.0 33 34.294300866612275 36.0 36.0 36.0 32.0 36.0 34 34.290037634052936 36.0 36.0 36.0 32.0 36.0 35 34.23323924820099 36.0 36.0 36.0 32.0 36.0 36 34.18846979352724 36.0 36.0 36.0 32.0 36.0 37 34.17497629495689 36.0 36.0 36.0 32.0 36.0 38 34.12640117018383 36.0 36.0 36.0 32.0 36.0 39 34.14082265687593 36.0 36.0 36.0 32.0 36.0 40 34.107402221291174 36.0 36.0 36.0 32.0 36.0 41 34.05503245202026 36.0 36.0 36.0 32.0 36.0 42 33.985063985240394 36.0 36.0 36.0 32.0 36.0 43 34.001165038552855 36.0 36.0 36.0 32.0 36.0 44 33.91075143149059 36.0 36.0 36.0 32.0 36.0 45 33.86102045616588 36.0 36.0 36.0 32.0 36.0 46 33.8301836865201 36.0 36.0 36.0 32.0 36.0 47 33.81801877292406 36.0 36.0 36.0 32.0 36.0 48 33.760968635839085 36.0 36.0 36.0 32.0 36.0 49 33.71604666034532 36.0 36.0 36.0 27.0 36.0 50 32.98910303057032 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 5.0 21 19.0 22 51.0 23 166.0 24 378.0 25 994.0 26 2177.0 27 4013.0 28 7215.0 29 11699.0 30 17596.0 31 26605.0 32 41192.0 33 68925.0 34 130784.0 35 232367.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.13771291952198 19.663849485722057 12.164782114116962 26.033655480639002 2 15.470657956393504 21.7111827779156 37.529700377628934 25.288458888061964 3 17.210659590654668 26.57657492107478 29.853028192566512 26.359737295704043 4 11.413702617477783 16.795114923519076 38.688467955926996 33.10271450307614 5 13.465567046682397 38.350717031614074 33.542819760817956 14.640896160885578 6 31.64702574666429 38.670346774178725 17.167811799987874 12.514815679169109 7 28.752065007065585 31.978713199690546 21.743077287770564 17.5261445054733 8 27.45227752173881 33.51360191698457 19.960013818753815 19.074106742522805 9 27.78007479074212 13.728419563200015 19.043523801648337 39.44798184440953 10 15.05373182600003 26.83338723666995 32.71797774282228 25.39490319450774 11 36.71084257646255 21.537226105684066 23.42756547369659 18.324365844156798 12 23.944893942707193 24.81959326481522 29.555649069161888 21.679863723315698 13 28.49582403043083 19.989525620882603 26.288302691180387 25.226347657506174 14 22.933251008842532 20.691011194660668 26.313332892309276 30.062404904187524 15 24.651341432711515 28.153823253215528 23.01578404761861 24.17905126645435 16 24.91537757588454 26.488013201465687 24.470857176459347 24.125752046190428 17 22.90366564496093 26.549648283313854 26.183230795239883 24.363455276485332 18 24.075687078730144 25.323601402456504 27.5151234499842 23.085588068829153 19 24.958653994575407 25.60989952001882 26.538990201915514 22.892456283490265 20 25.130884279736783 24.939955860436655 25.66030177348429 24.26885808634228 21 26.79184399508993 24.708740361786734 24.995222239373156 23.504193403750172 22 24.96940384353879 25.073779920835893 25.80735263310706 24.149463602518257 23 23.243608779383443 24.67272099142937 26.89715243373565 25.18651779545154 24 23.98853331128201 25.9005669027996 26.06540055312072 24.04549923279767 25 23.976985387080653 25.2420172885243 26.26631824997795 24.5146790744171 26 23.912767822521808 25.875987996111416 26.872575378061846 23.33866880330493 27 24.67490223176218 25.556837895851096 25.593225322708697 24.175034549678028 28 23.31347419721188 25.447749399999264 26.9537236799065 24.285052722882355 29 23.80303949133543 25.525111637907273 26.67806016502196 23.993788705735337 30 23.681981149238567 25.61538786663702 26.84294768720747 23.859683296916952 31 24.44593094627276 25.477069075779742 25.63106903167474 24.44593094627276 32 23.897854698750017 25.734977929528856 25.37828530264662 24.98888206907451 33 23.64187014953625 25.232243374516905 26.359691922616786 24.766194553330063 34 24.281933954462758 25.341713067607547 26.433283716485654 23.943069261444034 35 25.514042564139316 25.233981479950092 25.965374600076814 23.28660135583378 36 23.85473351086411 25.75298962933558 25.84910618950216 24.543170670298146 37 25.057105841059236 25.639465970799296 25.314013212904175 23.989414975237292 38 23.80694222895242 25.384821776428474 26.43104449524762 24.377191499371495 39 24.69517405630298 25.396618292680685 25.287827360551894 24.62038029046444 40 25.06395036863345 25.624802452165856 26.023573428989366 23.28767375021133 41 23.86327092035408 25.92181501770583 26.399238474670643 23.815675587269443 42 25.405934844609096 26.381905853988414 25.343455058657494 22.868704242744993 43 24.25112232878399 25.2020926860732 26.05493392823344 24.491851056909375 44 24.065243237978677 25.897544741711826 25.45008168268162 24.587130337627876 45 24.364638041229156 26.34928277144611 25.37772567064453 23.908353516680204 46 23.908177778757842 26.007659202252185 25.440018229195378 24.64414478979459 47 24.30238690720115 25.743645909327295 25.831117448918274 24.122849734553277 48 25.49482980721346 26.374506824066437 24.59420372415593 23.536459644564175 49 24.12400952618967 26.589168369522078 25.076444731928905 24.21037737235935 50 24.363167934021586 26.52036649772685 24.913171793053007 24.203293775198556 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 36.5 2 19.0 3 55.5 4 92.0 5 107.5 6 123.0 7 129.5 8 136.0 9 180.0 10 224.0 11 304.5 12 385.0 13 728.0 14 1071.0 15 1380.0 16 1689.0 17 1872.5 18 2056.0 19 2081.0 20 2106.0 21 2531.0 22 2956.0 23 3333.0 24 3710.0 25 4579.0 26 5448.0 27 6623.5 28 7799.0 29 8758.0 30 9717.0 31 10399.0 32 11081.0 33 12639.0 34 14197.0 35 16106.0 36 18015.0 37 21317.0 38 24619.0 39 26079.0 40 27539.0 41 29743.5 42 31948.0 43 31458.0 44 30968.0 45 33641.5 46 36315.0 47 38338.5 48 40362.0 49 41052.5 50 41743.0 51 39268.5 52 36794.0 53 35973.0 54 35152.0 55 35163.0 56 35174.0 57 34402.0 58 33630.0 59 29462.5 60 25295.0 61 21899.5 62 18504.0 63 15966.0 64 13428.0 65 11290.0 66 9152.0 67 7788.0 68 6424.0 69 6311.0 70 6198.0 71 4762.5 72 3327.0 73 2897.5 74 2468.0 75 1872.0 76 1276.0 77 1214.0 78 1152.0 79 941.5 80 731.0 81 590.0 82 449.0 83 388.5 84 328.0 85 239.5 86 151.0 87 107.0 88 63.0 89 54.5 90 46.0 91 38.0 92 30.0 93 26.0 94 22.0 95 15.0 96 8.0 97 7.5 98 7.0 99 7.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.004961520650951509 2 5.512800723279455E-4 3 3.6752004821863035E-4 4 0.0 5 0.0 6 1.8376002410931517E-4 7 1.8376002410931517E-4 8 0.0 9 5.512800723279455E-4 10 7.350400964372607E-4 11 0.0 12 1.8376002410931517E-4 13 5.512800723279455E-4 14 0.0 15 0.0056965607473887705 16 0.001102560144655891 17 0.0 18 0.0 19 0.0 20 9.188001205465758E-4 21 0.0 22 3.6752004821863035E-4 23 7.350400964372607E-4 24 5.512800723279455E-4 25 0.002205120289311782 26 0.0056965607473887705 27 0.008085441060809868 28 0.004042720530404934 29 0.0033076804339676733 30 0.003491440458076988 31 0.0058803207714980855 32 0.004042720530404934 33 0.007166640940263292 34 0.0033076804339676733 35 0.0038589605062956185 36 0.010474321374230964 37 0.004226480554514248 38 0.007350400964372606 39 0.004594000602732879 40 0.0029401603857490428 41 0.003123920409858358 42 0.002205120289311782 43 0.001286320168765206 44 0.0016538402169838367 45 0.0018376002410931515 46 0.001102560144655891 47 0.002021360265202467 48 0.002021360265202467 49 7.350400964372607E-4 50 0.0018376002410931515 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 544188.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.106441425034994 #Duplication Level Percentage of deduplicated Percentage of total 1 85.72507758013118 52.38354431806867 2 9.400660638061833 11.48881837272715 3 2.11661454026394 3.8801634727204743 4 0.7838618434088572 1.9159603127833313 5 0.39523333684146833 1.2075651373462155 6 0.25282621990320936 0.9269586358337089 7 0.17872427455131956 0.7644843089871458 8 0.12377211632853162 0.6050618861185628 9 0.10095278999926378 0.5551979173905484 >10 0.7206876055409115 9.031486544062412 >50 0.10668806184298717 4.634263215125735 >100 0.08885634388282701 10.249934387275152 >500 0.0060446492437297135 2.3565614915609148 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 802 0.14737553933567077 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 788 0.14480289899814036 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 776 0.1425977787088286 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 755 0.13873881820253295 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 702 0.12899953692473923 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 697 0.12808073680419266 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 686 0.12605937653899021 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 683 0.12550809646666225 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 640 0.1176064154299617 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 604 0.11099105456202636 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 601 0.11043977448969841 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC 601 0.11043977448969841 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 600 0.11025601446558911 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 591 0.10860217424860526 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 585 0.10749961410394936 No Hit CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCTTTGAACAC 548 0.1007004932119047 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 1.8376002410931517E-4 0.0 26 0.0 0.0 0.0 5.512800723279455E-4 0.0 27 0.0 0.0 0.0 5.512800723279455E-4 0.0 28 0.0 0.0 0.0 0.001102560144655891 0.0 29 0.0 0.0 0.0 0.0016538402169838365 0.0 30 0.0 0.0 0.0 0.003123920409858358 0.0 31 0.0 0.0 0.0 0.0055128007232794545 0.0 32 0.0 0.0 0.0 0.009555521253684389 0.0 33 0.0 0.0 0.0 0.012128161591214801 0.0 34 0.0 0.0 0.0 0.018008482362712887 0.0 35 0.0 0.0 0.0 0.024072563158320286 0.0 36 0.0 0.0 0.0 0.03307680433967673 0.0 37 0.0 0.0 0.0 0.049247686461296465 0.0 38 0.0 0.0 0.0 0.07111512933030496 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCACT 30 0.0057348306 29.341118 32 CTCGCGT 30 0.0057399864 29.335724 39 GTATTAT 45 4.0734252E-5 29.32494 1 CGGTTAT 55 4.951329E-6 28.00228 35 AGCGGTT 65 5.912152E-7 27.081617 33 CGTCTTA 70 1.1313641E-6 25.140284 15 CGTCGTA 190 0.0 24.311068 10 GTATCAA 1160 0.0 23.510513 1 ACCGTCG 200 0.0 23.09339 8 GCGGTTA 70 3.2091448E-5 22.001791 34 CCGTCGT 210 0.0 21.995728 9 CGCTTAG 70 3.2159835E-5 21.995726 18 CTATACA 70 3.218266E-5 21.993706 4 TATACAA 50 0.0025829198 21.993706 5 ATACCGT 210 0.0 21.993706 6 TACCGTC 215 0.0 21.482224 7 GTCGTAG 230 0.0 21.03939 11 TCGCTCG 105 7.6974175E-8 20.95987 27 CGGCGTT 235 0.0 20.597422 41 ACTATAC 65 4.9368886E-4 20.301882 3 >>END_MODULE