##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064027_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1196459 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.317474313787603 32.0 32.0 32.0 32.0 32.0 2 31.386600794511136 32.0 32.0 32.0 32.0 32.0 3 31.466611058130702 32.0 32.0 32.0 32.0 32.0 4 31.548539481921235 32.0 32.0 32.0 32.0 32.0 5 31.48959220499825 32.0 32.0 32.0 32.0 32.0 6 35.07147006291064 36.0 36.0 36.0 36.0 36.0 7 35.09599576751063 36.0 36.0 36.0 36.0 36.0 8 35.045377233987956 36.0 36.0 36.0 36.0 36.0 9 35.15726238843119 36.0 36.0 36.0 36.0 36.0 10 34.998212224572676 36.0 36.0 36.0 36.0 36.0 11 35.14593061692879 36.0 36.0 36.0 36.0 36.0 12 35.05346693869159 36.0 36.0 36.0 36.0 36.0 13 35.096891744723386 36.0 36.0 36.0 36.0 36.0 14 35.04697026809945 36.0 36.0 36.0 36.0 36.0 15 35.017313589517066 36.0 36.0 36.0 36.0 36.0 16 35.021227639225415 36.0 36.0 36.0 36.0 36.0 17 34.98842083180452 36.0 36.0 36.0 36.0 36.0 18 34.98005782061901 36.0 36.0 36.0 36.0 36.0 19 34.98714289415684 36.0 36.0 36.0 36.0 36.0 20 34.9797945437328 36.0 36.0 36.0 36.0 36.0 21 34.96809251299042 36.0 36.0 36.0 36.0 36.0 22 34.95112160132524 36.0 36.0 36.0 36.0 36.0 23 34.897008589512886 36.0 36.0 36.0 32.0 36.0 24 34.870709318079435 36.0 36.0 36.0 32.0 36.0 25 34.84121311302769 36.0 36.0 36.0 32.0 36.0 26 34.781396604480385 36.0 36.0 36.0 32.0 36.0 27 34.77952692068847 36.0 36.0 36.0 32.0 36.0 28 34.746443463587134 36.0 36.0 36.0 32.0 36.0 29 34.717130298656286 36.0 36.0 36.0 32.0 36.0 30 34.702187872714404 36.0 36.0 36.0 32.0 36.0 31 34.68870140974325 36.0 36.0 36.0 32.0 36.0 32 34.65910240133594 36.0 36.0 36.0 32.0 36.0 33 34.62792038841281 36.0 36.0 36.0 32.0 36.0 34 34.62072833252122 36.0 36.0 36.0 32.0 36.0 35 34.579411413178384 36.0 36.0 36.0 32.0 36.0 36 34.55045179149474 36.0 36.0 36.0 32.0 36.0 37 34.5371166082582 36.0 36.0 36.0 32.0 36.0 38 34.4972339210955 36.0 36.0 36.0 32.0 36.0 39 34.495412713682626 36.0 36.0 36.0 32.0 36.0 40 34.473301634239036 36.0 36.0 36.0 32.0 36.0 41 34.46127280583789 36.0 36.0 36.0 32.0 36.0 42 34.39552713465317 36.0 36.0 36.0 32.0 36.0 43 34.38089562617691 36.0 36.0 36.0 32.0 36.0 44 34.31067759112514 36.0 36.0 36.0 32.0 36.0 45 34.28738970579017 36.0 36.0 36.0 32.0 36.0 46 34.25541117581129 36.0 36.0 36.0 32.0 36.0 47 34.21563463520271 36.0 36.0 36.0 32.0 36.0 48 34.171603038633165 36.0 36.0 36.0 32.0 36.0 49 34.1523470507556 36.0 36.0 36.0 32.0 36.0 50 33.55083542352893 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 11.0 21 27.0 22 131.0 23 387.0 24 916.0 25 2270.0 26 4563.0 27 8529.0 28 14298.0 29 21617.0 30 31216.0 31 43921.0 32 63901.0 33 101518.0 34 211112.0 35 692036.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.884151830679585 17.84364057945817 11.524299980189893 26.74790760967235 2 16.020075974441163 20.55839960550125 36.9062772941732 26.515247125884382 3 18.3658766124678 24.277659558463398 28.682745236355977 28.67371859271282 4 12.214793820766111 15.875094758784044 36.04461164151885 35.865499778930996 5 14.138553849317026 37.00895726472867 33.49943458154437 15.35305430440993 6 34.376329446022716 35.82134585697606 16.595163888046123 13.207160808955107 7 30.163674643259817 30.326989892674966 20.931598993362915 18.5777364707023 8 27.93269801363692 33.346009638449495 19.316181596010892 19.405110751902697 9 27.701779357645957 13.61627758280169 18.13182909674761 40.550113962804744 10 15.47204725988927 26.945675867233675 31.935696327796947 25.646580545080106 11 37.8568759982582 20.72691166182878 22.397173659941544 19.019038679971484 12 24.762966628108344 23.49697774092821 28.9937950079234 22.746260623040047 13 29.84962230056484 19.29493319425569 25.143549187850095 25.711895317329375 14 23.51824641816568 19.436183923493925 25.29884140969899 31.746728248641404 15 25.136367207677683 27.291662835735814 22.163787756957944 25.408182199628556 16 25.698732586012646 25.618578931708086 23.799199633583296 24.88348884869598 17 24.075459334586473 25.71956080400582 25.191586172196455 25.01339368921125 18 24.810983121791562 24.750805296317285 26.32654494029858 24.11166664159257 19 25.777565298936278 24.569834820917393 25.408559758420473 24.24404012172586 20 25.931609401471515 24.251640894612482 24.89220202080988 24.92454768310612 21 26.855997572837847 24.09869456454421 24.41345670850401 24.63185115411393 22 26.00444478990887 24.25059989619351 24.908124571129594 24.836830742768022 23 24.612333288478528 24.021754302091264 25.482488656052517 25.883423753377695 24 25.077771481394183 24.64541052142414 25.313217223562294 24.96360077361938 25 25.1122504245958 24.290306511360445 25.394757077711063 25.202685986332696 26 24.65226843597903 25.227161218224385 25.746303275584943 24.374267070211644 27 25.30757445186593 24.663881034155622 24.944561789469372 25.08398272450908 28 24.625818385153597 24.752363527249415 25.559527620525053 25.062290467071936 29 24.685898357443993 24.72969539328735 25.35137927230055 25.23302697696811 30 24.597235583854822 24.933238271876323 25.608670541006116 24.860855603262735 31 25.13152373612669 24.62707775740119 24.902914000946204 25.338484505525923 32 25.031176551221485 24.814528774368696 24.741309849784187 25.412984824625628 33 24.59227955680671 24.472922280693542 25.262201523226192 25.67259663927356 34 25.201600770295478 24.644941926942288 25.492634718126684 24.660822584635547 35 25.740771852048734 24.486698244179934 25.347766379894704 24.424763523876628 36 24.672777987209525 25.0522627405319 25.0479162191282 25.227043053130373 37 25.619563927295587 24.931670352706355 24.712263228368965 24.736502491629096 38 24.89428375835762 24.68113774832555 25.252034708529102 25.172543784787727 39 25.488588322024462 24.54810490753139 24.698639090743445 25.264667679700704 40 25.758524282556095 24.720273144801013 25.140605214658546 24.380597357984346 41 24.650959860383946 25.046304654537188 25.575548467767277 24.72718701731159 42 25.811070137841806 25.28626496518015 24.90948176429486 23.993183132683185 43 25.024008665686537 24.524611703190207 25.275838464515232 25.175541166608024 44 24.70566995919582 25.066237841072642 24.808725174391487 25.41936702534005 45 24.851267838247608 25.11588487905012 24.919636991556658 25.11321029114561 46 24.662981873861735 24.90193898778803 24.923837121348257 25.51124201700198 47 25.071943017285548 24.79553807024714 25.17215757171526 24.96036134075205 48 25.685786786756665 25.132727534109637 24.40222460708304 24.779261072050655 49 25.01182661431196 25.346398607886307 24.600695053884227 25.04107972391751 50 25.058715562591203 25.53479220959408 24.368421140611442 25.038071087203267 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 17.0 1 22.0 2 27.0 3 71.5 4 116.0 5 153.0 6 190.0 7 185.0 8 180.0 9 236.0 10 292.0 11 462.0 12 632.0 13 1192.5 14 1753.0 15 2361.0 16 2969.0 17 3154.5 18 3340.0 19 3466.0 20 3592.0 21 3914.0 22 4236.0 23 4777.0 24 5318.0 25 6180.5 26 7043.0 27 9020.0 28 10997.0 29 12869.5 30 14742.0 31 16705.0 32 18668.0 33 21965.5 34 25263.0 35 29212.0 36 33161.0 37 38649.0 38 44137.0 39 47520.0 40 50903.0 41 55482.5 42 60062.0 43 61938.5 44 63815.0 45 70336.0 46 76857.0 47 81809.0 48 86761.0 49 89905.0 50 93049.0 51 91211.0 52 89373.0 53 88347.5 54 87322.0 55 86866.5 56 86411.0 57 84148.0 58 81885.0 59 74908.5 60 67932.0 61 59999.5 62 52067.0 63 45204.0 64 38341.0 65 32319.0 66 26297.0 67 22557.5 68 18818.0 69 16851.0 70 14884.0 71 11662.0 72 8440.0 73 7317.5 74 6195.0 75 4894.5 76 3594.0 77 3110.0 78 2626.0 79 2167.5 80 1709.0 81 1397.0 82 1085.0 83 904.0 84 723.0 85 521.0 86 319.0 87 228.0 88 137.0 89 105.5 90 74.0 91 59.0 92 44.0 93 34.0 94 24.0 95 22.5 96 21.0 97 12.5 98 4.0 99 9.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00835799638767396 2 3.343198555069585E-4 3 8.357996387673962E-5 4 0.0 5 0.0 6 1.6715992775347924E-4 7 0.0 8 8.357996387673962E-5 9 0.001337279422027834 10 9.193796026441358E-4 11 0.0 12 2.5073989163021886E-4 13 4.178998193836981E-4 14 4.178998193836981E-4 15 0.0047640579409741575 16 5.850597471371773E-4 17 0.0 18 4.178998193836981E-4 19 0.0 20 6.68639711013917E-4 21 0.0 22 1.6715992775347924E-4 23 5.014797832604377E-4 24 4.178998193836981E-4 25 0.0022566590246719696 26 0.005181957760357856 27 0.006853557037892649 28 0.004011838266083502 29 0.002590978880178928 30 0.003343198555069585 31 0.008107256496043743 32 0.003928258302206762 33 0.00426257815771372 34 0.0029252987356858866 35 0.0031760386273161053 36 0.00835799638767396 37 0.0044297380854672 38 0.008023676532167004 39 0.0044297380854672 40 0.002005919133041751 41 0.0029252987356858866 42 0.0012536994581510941 43 0.001337279422027834 44 0.001086539530397615 45 0.001086539530397615 46 8.357996387673962E-4 47 0.00217307906079523 48 0.0019223391691650111 49 4.178998193836981E-4 50 0.001086539530397615 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1196459.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.302121682694775 #Duplication Level Percentage of deduplicated Percentage of total 1 78.85870447188391 45.97629783859442 2 12.96461056500926 15.1172860545984 3 3.757921338692621 6.572843614873573 4 1.5074673871835091 3.515541881610676 5 0.7836757454682118 2.2844979336032107 6 0.46548909360563057 1.6283401066417662 7 0.31238458107702455 1.2748878700425221 8 0.2188937376573902 1.0209575462784826 9 0.158289714155935 0.8305763558254466 >10 0.8348312944555276 8.762839990231884 >50 0.07005237964061045 2.836012343221348 >100 0.06060868396222463 7.173403665596631 >500 0.00634947586035881 2.5275421180356625 >1k 7.215313477680466E-4 0.47897268084604977 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1213 0.10138249618248515 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 8.357996387673961E-5 8.357996387673961E-5 6 0.0 0.0 0.0 8.357996387673961E-5 8.357996387673961E-5 7 0.0 0.0 0.0 8.357996387673961E-5 8.357996387673961E-5 8 0.0 0.0 0.0 8.357996387673961E-5 8.357996387673961E-5 9 0.0 0.0 0.0 8.357996387673961E-5 8.357996387673961E-5 10 0.0 0.0 0.0 8.357996387673961E-5 8.357996387673961E-5 11 0.0 0.0 0.0 8.357996387673961E-5 8.357996387673961E-5 12 0.0 0.0 0.0 8.357996387673961E-5 4.1789981938369805E-4 13 0.0 0.0 0.0 8.357996387673961E-5 5.850597471371773E-4 14 0.0 0.0 0.0 8.357996387673961E-5 5.850597471371773E-4 15 0.0 0.0 0.0 8.357996387673961E-5 5.850597471371773E-4 16 0.0 0.0 0.0 8.357996387673961E-5 5.850597471371773E-4 17 0.0 0.0 0.0 8.357996387673961E-5 5.850597471371773E-4 18 0.0 0.0 0.0 1.6715992775347921E-4 5.850597471371773E-4 19 0.0 0.0 0.0 1.6715992775347921E-4 5.850597471371773E-4 20 0.0 0.0 0.0 3.3431985550695843E-4 5.850597471371773E-4 21 0.0 0.0 0.0 4.1789981938369805E-4 6.686397110139169E-4 22 0.0 0.0 0.0 4.1789981938369805E-4 6.686397110139169E-4 23 0.0 0.0 0.0 5.850597471371773E-4 6.686397110139169E-4 24 0.0 0.0 0.0 0.001086539530397615 6.686397110139169E-4 25 0.0 0.0 0.0 0.001504439349781313 6.686397110139169E-4 26 0.0 0.0 0.0 0.0017551792414115318 6.686397110139169E-4 27 0.0 0.0 0.0 0.0020894990969184905 6.686397110139169E-4 28 0.0 0.0 0.0 0.003426778518946324 7.522196748906565E-4 29 0.0 0.0 0.0 0.007104296929522867 7.522196748906565E-4 30 0.0 0.0 0.0 0.013957853967415515 7.522196748906565E-4 31 0.0 0.0 0.0 0.030172366959503 7.522196748906565E-4 32 0.0 0.0 0.0 0.04438096081854873 7.522196748906565E-4 33 0.0 0.0 0.0 0.0595089342802386 7.522196748906565E-4 34 0.0 0.0 0.0 0.07589060720007956 8.357996387673961E-4 35 0.0 0.0 0.0 0.09586621856662034 8.357996387673961E-4 36 0.0 0.0 0.0 0.12562068570673965 8.357996387673961E-4 37 0.0 0.0 0.0 0.1677449875006164 8.357996387673961E-4 38 0.0 0.0 0.0 0.22909268098614327 8.357996387673961E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCTAA 265 0.0 23.24557 1 GTATCAA 1785 0.0 21.445644 1 ACCGTCG 320 0.0 20.623531 8 TACCGTC 320 0.0 20.621807 7 ATACCGT 325 0.0 20.304548 6 CCGTCGT 330 0.0 18.666897 9 CGTCGTA 355 0.0 18.59178 10 TAGGACG 315 0.0 18.15592 4 TACGCTC 75 0.0012896684 17.602425 34 GTATATG 165 1.6589183E-9 17.333548 1 TATGTAC 155 1.441731E-8 17.029621 3 GTAAACG 285 0.0 16.984797 27 CGAGCCG 475 0.0 16.673193 15 GGCGTTA 330 0.0 16.666176 42 AACGCAG 2260 0.0 16.64344 6 TAAACGC 305 0.0 16.591755 28 CTATACT 160 2.1331289E-8 16.497446 4 GCATTCG 415 0.0 16.43325 22 AATCCCG 135 1.0862295E-6 16.295135 19 GTCGTAG 380 0.0 16.210726 11 >>END_MODULE