##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064026_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 661767 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.271255592980612 32.0 32.0 32.0 32.0 32.0 2 31.361300880823613 32.0 32.0 32.0 32.0 32.0 3 31.442231178043027 32.0 32.0 32.0 32.0 32.0 4 31.531103847728883 32.0 32.0 32.0 32.0 32.0 5 31.481722418917837 32.0 32.0 32.0 32.0 32.0 6 35.03958946275653 36.0 36.0 36.0 36.0 36.0 7 35.05067946875562 36.0 36.0 36.0 36.0 36.0 8 35.00998387650034 36.0 36.0 36.0 36.0 36.0 9 35.126973693157865 36.0 36.0 36.0 36.0 36.0 10 34.961341378461 36.0 36.0 36.0 36.0 36.0 11 35.114499514179464 36.0 36.0 36.0 36.0 36.0 12 35.015451057547445 36.0 36.0 36.0 36.0 36.0 13 35.05062506894421 36.0 36.0 36.0 36.0 36.0 14 34.99559512638134 36.0 36.0 36.0 36.0 36.0 15 34.977815454684205 36.0 36.0 36.0 36.0 36.0 16 34.98346245733015 36.0 36.0 36.0 36.0 36.0 17 34.945329700634815 36.0 36.0 36.0 36.0 36.0 18 34.94776258108972 36.0 36.0 36.0 36.0 36.0 19 34.937709193719236 36.0 36.0 36.0 36.0 36.0 20 34.93766083833132 36.0 36.0 36.0 36.0 36.0 21 34.93205463554393 36.0 36.0 36.0 32.0 36.0 22 34.9176235744605 36.0 36.0 36.0 32.0 36.0 23 34.863403584645354 36.0 36.0 36.0 32.0 36.0 24 34.83422110803349 36.0 36.0 36.0 32.0 36.0 25 34.80699853573841 36.0 36.0 36.0 32.0 36.0 26 34.75239321392575 36.0 36.0 36.0 32.0 36.0 27 34.74425288658999 36.0 36.0 36.0 32.0 36.0 28 34.718331376451225 36.0 36.0 36.0 32.0 36.0 29 34.69109973752091 36.0 36.0 36.0 32.0 36.0 30 34.66809617282215 36.0 36.0 36.0 32.0 36.0 31 34.65110832060227 36.0 36.0 36.0 32.0 36.0 32 34.61363591717326 36.0 36.0 36.0 32.0 36.0 33 34.5893418680593 36.0 36.0 36.0 32.0 36.0 34 34.56720114481381 36.0 36.0 36.0 32.0 36.0 35 34.52617462037243 36.0 36.0 36.0 32.0 36.0 36 34.48570267178629 36.0 36.0 36.0 32.0 36.0 37 34.48392863349185 36.0 36.0 36.0 32.0 36.0 38 34.44085153838133 36.0 36.0 36.0 32.0 36.0 39 34.42586439033678 36.0 36.0 36.0 32.0 36.0 40 34.401763762774515 36.0 36.0 36.0 32.0 36.0 41 34.3817536988094 36.0 36.0 36.0 32.0 36.0 42 34.3072833791954 36.0 36.0 36.0 32.0 36.0 43 34.30000287110116 36.0 36.0 36.0 32.0 36.0 44 34.22053230215469 36.0 36.0 36.0 32.0 36.0 45 34.20093628119867 36.0 36.0 36.0 32.0 36.0 46 34.16613097963483 36.0 36.0 36.0 32.0 36.0 47 34.115456044196826 36.0 36.0 36.0 32.0 36.0 48 34.06368404589531 36.0 36.0 36.0 32.0 36.0 49 34.04948418401038 36.0 36.0 36.0 32.0 36.0 50 33.43823581411584 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 4.0 20 7.0 21 26.0 22 70.0 23 234.0 24 571.0 25 1377.0 26 2869.0 27 5124.0 28 8657.0 29 13063.0 30 18360.0 31 25570.0 32 36019.0 33 57019.0 34 115837.0 35 376959.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.334396247258965 18.423371210346637 11.810736841150788 26.431495701243605 2 15.714911750483559 20.943091150870405 37.24582930367505 26.096167794970988 3 17.759956721731616 25.036871150440337 29.276297894717757 27.926874233110293 4 11.955869664096276 16.12470854545482 36.71730382445785 35.20211796599105 5 13.847169774255894 37.445505744468974 33.7934650715433 14.913859409731826 6 33.39745468942194 36.58453290135788 16.815007117319414 13.203005291900762 7 29.334040530881715 31.053981235087274 21.474476666258667 18.137501567772343 8 27.72002834834617 33.272737987841644 19.88690883649381 19.120324827318377 9 27.658130868801774 13.777158555492761 18.71080539529317 39.85390518041229 10 15.312569417474995 27.211347972140832 32.59262841193973 24.883454198444444 11 37.113818005430915 20.96236288603088 22.907911697017227 19.015907411520974 12 24.27459252968572 24.04973963606471 29.579791043964182 22.095876790285388 13 29.493595904280074 19.718812144510732 25.54097835482136 25.246613596387835 14 23.2604878461571 19.632014941837447 26.030197985390608 31.077299226614848 15 24.773629840966652 27.703143794918912 22.753223281369948 24.770003082744488 16 25.192439623673625 25.893744918898825 24.35589014848149 24.557925308946064 17 23.51220293547427 26.00703873115462 25.9453856115521 24.53537272181901 18 24.395481182170133 25.168866336439166 26.846800832922817 23.588851648467887 19 25.15945944720725 25.036455429176733 26.100576184669226 23.70350893894679 20 25.48692197612726 24.448779691700455 25.66055013985454 24.40374819231775 21 26.404459575651252 24.385471019256023 25.04567317499966 24.164396230093068 22 25.316161126196985 24.621656867145084 25.619742296004482 24.442439710653446 23 24.137988352378333 24.431747777915454 25.940891493367747 25.489372376338466 24 24.405524661508704 25.126027562862667 25.864815038684718 24.603632736943908 25 24.49040654141349 24.739744285254467 26.01892246805077 24.750926705281277 26 24.296931432491817 25.433930444191237 26.294235517769764 23.97490260554718 27 24.693343085504274 25.140200050473528 25.61909410593094 24.547362758091253 28 24.044536658269703 25.021798361005036 26.303254869308056 24.630410111417202 29 24.17109810517281 25.081866387406706 26.02708882068579 24.719946686734698 30 24.104826193854713 25.33264424406454 26.255207837483734 24.30732172459701 31 24.657559088436194 25.07344496161518 25.41981502750408 24.84918092244454 32 24.307742524344615 25.21624545899648 25.408614759697045 25.067397256961865 33 24.144293628557698 24.82356959140682 25.833492007362473 25.198644772673006 34 24.688516712428957 25.063430010895303 25.954850223572844 24.293203053102893 35 25.246731031064463 24.88572020073955 25.859195198208397 24.00835356998759 36 24.23076516217364 25.43019876716904 25.645543719558912 24.693492351098413 37 24.88262059439994 25.31768375336044 25.492525043710323 24.307170608529294 38 24.298302748758154 25.164685205306803 25.83385344490167 24.703158601033373 39 24.823535278588345 25.104307235242473 25.294107869019427 24.778049617149755 40 25.14083825965014 25.244804700250246 25.665354997038165 23.949002043061448 41 24.215452640041345 25.5635427827083 26.003889680559606 24.21711489669075 42 25.209102434881686 25.624965055148643 25.541852976243547 23.624079533726125 43 24.551949661204432 24.90011424150291 25.822055259038073 24.725880838254582 44 24.19853753405696 25.55658479899782 25.277177945445395 24.96769972149982 45 24.372541582484207 25.75824660713827 25.27317429207398 24.596037518303547 46 24.152104401017898 25.41102762951904 25.412689873609 25.02417809585406 47 24.51847956503737 25.295802997470375 25.668446773593974 24.517270663898284 48 25.10491042757516 25.618846854198306 24.881716042946408 24.394526675280126 49 24.389661571194566 25.802551967166544 25.055911170749695 24.7518752908892 50 24.47530150613288 26.067568200604146 24.77858320451039 24.678547088752588 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 141.0 1 87.0 2 33.0 3 104.5 4 176.0 5 189.5 6 203.0 7 186.5 8 170.0 9 245.0 10 320.0 11 463.5 12 607.0 13 1043.5 14 1480.0 15 1864.0 16 2248.0 17 2428.0 18 2608.0 19 2630.0 20 2652.0 21 2902.5 22 3153.0 23 3568.5 24 3984.0 25 4516.5 26 5049.0 27 6018.0 28 6987.0 29 8147.0 30 9307.0 31 10770.0 32 12233.0 33 13969.5 34 15706.0 35 18164.5 36 20623.0 37 23630.5 38 26638.0 39 28730.5 40 30823.0 41 33466.5 42 36110.0 43 36842.0 44 37574.0 45 40449.0 46 43324.0 47 45663.0 48 48002.0 49 48862.0 50 49722.0 51 47873.5 52 46025.0 53 45568.5 54 45112.0 55 44975.5 56 44839.0 57 43317.0 58 41795.0 59 38104.0 60 34413.0 61 30189.0 62 25965.0 63 22663.0 64 19361.0 65 16498.5 66 13636.0 67 11755.5 68 9875.0 69 8905.0 70 7935.0 71 6262.5 72 4590.0 73 3904.0 74 3218.0 75 2541.0 76 1864.0 77 1574.5 78 1285.0 79 1085.5 80 886.0 81 698.5 82 511.0 83 412.5 84 314.0 85 228.0 86 142.0 87 99.5 88 57.0 89 39.0 90 21.0 91 20.0 92 19.0 93 14.5 94 10.0 95 11.5 96 13.0 97 9.5 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009671077584708818 2 0.0010577741108275269 3 4.533317617832258E-4 4 0.0 5 0.0 6 1.5111058726107528E-4 7 0.0 8 0.0 9 7.555529363053764E-4 10 0.0015111058726107528 11 0.0 12 1.5111058726107528E-4 13 4.533317617832258E-4 14 1.5111058726107528E-4 15 0.00287110115796043 16 1.5111058726107528E-4 17 0.0 18 1.5111058726107528E-4 19 0.0 20 0.0012088846980886022 21 0.0 22 0.0 23 1.5111058726107528E-4 24 0.0010577741108275269 25 0.0021155482216550538 26 0.003777764681526882 27 0.005137759966876559 28 0.0030222117452215055 29 0.0027199905706993548 30 0.0036266540942658065 31 0.007102197601270537 32 0.00287110115796043 33 0.004986649379615484 34 0.0021155482216550538 35 0.0021155482216550538 36 0.00574220231592086 37 0.0036266540942658065 38 0.007555529363053764 39 0.0030222117452215055 40 0.0022666588089161293 41 0.0024177693961772045 42 0.0015111058726107528 43 0.001662216459871828 44 0.0012088846980886022 45 0.0015111058726107528 46 0.001662216459871828 47 0.0013599952853496774 48 0.0018133270471329033 49 4.533317617832258E-4 50 9.066635235664516E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 661767.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.61262763693117 #Duplication Level Percentage of deduplicated Percentage of total 1 82.65958422529573 53.40852936172582 2 11.103232560661912 14.348180620165953 3 2.7898891492326268 5.407862062430472 4 1.1512793327046558 2.97548731320562 5 0.5854600294658494 1.8914055440091841 6 0.36800802267968247 1.4266779202083384 7 0.2463353349481762 1.1141461289577654 8 0.1772251613638338 0.9160786687277146 9 0.1368600430414967 0.7958598299473139 >10 0.6628061134129485 7.8155875141333 >50 0.067308834971927 3.037455318485824 >100 0.049893089370636634 6.114734604173754 >500 0.0021181028505579663 0.7479951138288399 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 1.5111058726107528E-4 10 0.0 0.0 0.0 1.5111058726107528E-4 1.5111058726107528E-4 11 0.0 0.0 0.0 1.5111058726107528E-4 1.5111058726107528E-4 12 0.0 0.0 0.0 3.0222117452215056E-4 4.533317617832258E-4 13 0.0 0.0 0.0 3.0222117452215056E-4 4.533317617832258E-4 14 0.0 0.0 0.0 3.0222117452215056E-4 4.533317617832258E-4 15 0.0 0.0 0.0 3.0222117452215056E-4 4.533317617832258E-4 16 0.0 0.0 0.0 4.533317617832258E-4 6.044423490443011E-4 17 0.0 0.0 0.0 6.044423490443011E-4 6.044423490443011E-4 18 0.0 0.0 0.0 6.044423490443011E-4 6.044423490443011E-4 19 0.0 0.0 0.0 7.555529363053764E-4 6.044423490443011E-4 20 0.0 0.0 0.0 0.0010577741108275269 6.044423490443011E-4 21 0.0 0.0 0.0 0.0012088846980886022 9.066635235664516E-4 22 0.0 0.0 0.0 0.0018133270471329033 9.066635235664516E-4 23 0.0 0.0 0.0 0.0031733223324825807 9.066635235664516E-4 24 0.0 0.0 0.0 0.004382207030571183 9.066635235664516E-4 25 0.0 0.0 0.0 0.004835538792354409 9.066635235664516E-4 26 0.0 0.0 0.0 0.005137759966876559 9.066635235664516E-4 27 0.0 0.0 0.0 0.006951087014009463 9.066635235664516E-4 28 0.0 0.0 0.0 0.009671077584708818 9.066635235664516E-4 29 0.0 0.0 0.0 0.017377717535023655 9.066635235664516E-4 30 0.0 0.0 0.0 0.03007100686495398 9.066635235664516E-4 31 0.0 0.0 0.0 0.058328686682775056 9.066635235664516E-4 32 0.0 0.0 0.0 0.08870191472225118 9.066635235664516E-4 33 0.0 0.0 0.0 0.12330623920503742 9.066635235664516E-4 34 0.0 0.0 0.0 0.1553416837043854 0.0010577741108275269 35 0.0 0.0 0.0 0.1925148881706099 0.0010577741108275269 36 0.0 0.0 0.0 0.24495026195020303 0.0010577741108275269 37 0.0 0.0 0.0 0.32171444027882923 0.0012088846980886022 38 0.0 0.0 0.0 0.43474515955011356 0.0012088846980886022 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTCTAA 45 0.0013980356 24.442974 11 TAGGACG 100 1.7425918E-9 24.198544 4 GGCGTTA 190 0.0 23.156504 42 CGCGAGC 50 0.0025801163 21.998676 40 GTATTAG 145 1.2732926E-11 21.241709 1 CGTTATT 225 0.0 19.55438 44 GCGTTAT 215 0.0 19.440691 43 TCTAGAT 205 0.0 19.315912 2 CCGTCGT 160 5.2750693E-11 19.248842 9 GTCCTAA 115 2.017623E-7 19.13073 1 CGGCGTT 230 0.0 19.129284 41 CGTCGTA 150 4.638423E-10 19.06552 10 CCGATCG 185 1.8189894E-12 19.02732 18 CTAGATA 185 1.8189894E-12 19.025885 3 TAAGTAG 105 1.7912189E-6 18.856009 5 TCGCACG 190 1.8189894E-12 18.528002 22 GGGTAAG 95 1.5951175E-5 18.526602 1 GACAACG 60 0.007407985 18.333618 19 CTATATG 60 0.0074112145 18.332232 3 GCGGCGT 240 0.0 18.332232 40 >>END_MODULE