FastQCFastQC Report
Thu 2 Feb 2017
SRR4064024_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064024_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43236
Sequences flagged as poor quality0
Sequence length25
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGG4260.9852900360810437No Hit
GTATCAACGCAGAGTACTTTTTTTT2080.48108058099731704No Hit
TATCAACGCAGAGTACTTTTTTTTT1150.26598205199370895No Hit
GGTATCAACGCAGAGTACTTTTTTT600.13877324451845685No Hit
GTATCAACGCAGAGTACATGGGGGG540.12489592006661115No Hit
ACGCAGAGTACTTTTTTTTTTTTTT440.10176704598020168No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)