##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064024_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 43236 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24722453510963 32.0 32.0 32.0 32.0 32.0 2 31.48628457766676 32.0 32.0 32.0 32.0 32.0 3 31.551369229345916 32.0 32.0 32.0 32.0 32.0 4 31.597812008511426 32.0 32.0 32.0 32.0 32.0 5 31.590295124433343 32.0 32.0 32.0 32.0 32.0 6 35.18204736793413 36.0 36.0 36.0 36.0 36.0 7 35.166296604681285 36.0 36.0 36.0 36.0 36.0 8 35.1349569802942 36.0 36.0 36.0 36.0 36.0 9 35.21338699232121 36.0 36.0 36.0 36.0 36.0 10 35.08876861874364 36.0 36.0 36.0 36.0 36.0 11 35.17991951151818 36.0 36.0 36.0 36.0 36.0 12 35.14164122490517 36.0 36.0 36.0 36.0 36.0 13 35.11791100009251 36.0 36.0 36.0 36.0 36.0 14 35.097418817651956 36.0 36.0 36.0 36.0 36.0 15 35.07336478860209 36.0 36.0 36.0 36.0 36.0 16 35.125705430659636 36.0 36.0 36.0 36.0 36.0 17 35.075677676010734 36.0 36.0 36.0 36.0 36.0 18 35.05062910537515 36.0 36.0 36.0 36.0 36.0 19 35.06582477564992 36.0 36.0 36.0 36.0 36.0 20 35.06300305301138 36.0 36.0 36.0 36.0 36.0 21 35.04107688037746 36.0 36.0 36.0 36.0 36.0 22 35.052456286427976 36.0 36.0 36.0 36.0 36.0 23 34.98073364788602 36.0 36.0 36.0 36.0 36.0 24 34.984388009991676 36.0 36.0 36.0 36.0 36.0 25 34.94513831066703 36.0 36.0 36.0 36.0 36.0 26 34.904894069756686 36.0 36.0 36.0 36.0 36.0 27 34.87533536867425 36.0 36.0 36.0 32.0 36.0 28 34.8536404847812 36.0 36.0 36.0 32.0 36.0 29 34.84579979646591 36.0 36.0 36.0 32.0 36.0 30 34.85271532981774 36.0 36.0 36.0 32.0 36.0 31 34.79644277916551 36.0 36.0 36.0 32.0 36.0 32 34.80675825700805 36.0 36.0 36.0 32.0 36.0 33 34.747062632991025 36.0 36.0 36.0 32.0 36.0 34 34.75157276343788 36.0 36.0 36.0 32.0 36.0 35 34.68274123415672 36.0 36.0 36.0 32.0 36.0 36 34.65211860486632 36.0 36.0 36.0 32.0 36.0 37 34.582431307243965 36.0 36.0 36.0 32.0 36.0 38 34.575978351373855 36.0 36.0 36.0 32.0 36.0 39 34.47298547506708 36.0 36.0 36.0 32.0 36.0 40 34.4499722453511 36.0 36.0 36.0 32.0 36.0 41 34.40426959015635 36.0 36.0 36.0 32.0 36.0 42 34.47955407530761 36.0 36.0 36.0 32.0 36.0 43 34.39450920529189 36.0 36.0 36.0 32.0 36.0 44 34.35599962993801 36.0 36.0 36.0 32.0 36.0 45 34.35817374410214 36.0 36.0 36.0 32.0 36.0 46 34.26986770284022 36.0 36.0 36.0 32.0 36.0 47 34.181376630585625 36.0 36.0 36.0 32.0 36.0 48 34.22448885188269 36.0 36.0 36.0 32.0 36.0 49 34.18149227495606 36.0 36.0 36.0 32.0 36.0 50 33.53594227033028 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 22 4.0 23 13.0 24 33.0 25 101.0 26 174.0 27 352.0 28 548.0 29 844.0 30 1115.0 31 1563.0 32 2014.0 33 3105.0 34 6131.0 35 27239.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.01614582128565 18.7203627026902 12.673775762762832 26.58971571326132 2 15.94273290776205 20.809048015542604 37.04089184938477 26.20732722731057 3 17.860116569525395 23.885188269035062 29.635026366916456 28.619668794523083 4 12.843463780183182 16.668979554075307 35.75723933758905 34.730317328152466 5 14.497178277361458 36.490424646128226 33.62475714682209 15.387639929688223 6 33.326394671107415 36.06716625034693 16.546396521417336 14.06004255712832 7 30.166990470903876 30.689703025256733 21.132852252752336 18.010454251087058 8 27.187991488574337 33.899990748450364 19.520769728929597 19.391248034045702 9 26.51031547784254 15.55416782311037 18.937922101952076 38.997594597095016 10 16.15551854935702 28.409196040336752 31.97798131186974 23.457304098436488 11 35.31779072994727 22.24072532149135 22.576093995744287 19.865389952817097 12 23.908317143121476 24.107225460264594 28.853270422795816 23.131186973818117 13 29.58876861874364 20.3626607456749 25.404755296512167 24.643815339069295 14 23.644647978536405 19.527708391155517 25.46489036913683 31.362753261171246 15 25.164797039435644 26.899502717705566 22.84029143055395 25.095408812304846 16 24.798778795448236 26.977518734388013 23.51281339624387 24.71088907391988 17 23.26533444351929 27.738458691830882 24.919048940697568 24.07715792395226 18 24.07077599167341 25.680582861107897 25.650514629351218 24.59812651786747 19 24.648441113886577 26.100934406513094 25.846516791562586 23.404107688037744 20 25.765565732260153 25.386252197243035 25.030067536312334 23.818114534184474 21 25.41631973355537 25.716995096678698 24.993061337774076 23.873623831991857 22 25.168840780830788 25.69155333518364 24.817281894717365 24.322323989268202 23 25.02544176149505 24.694698862059393 25.09945415857156 25.18040521787399 24 25.1410861319271 25.494957905449162 24.937552039966697 24.426403922657045 25 24.713773563085464 25.63894992482942 25.82629813808257 23.820978374002543 26 24.537947306331105 24.984386204344105 26.372279151534777 24.105387337790013 27 24.070690014110244 26.654484050796885 25.060720316439593 24.21410561865328 28 24.52179946802359 24.94044177171273 26.027523996761882 24.510234763501792 29 24.2789406730658 26.441540418642305 24.739215913033423 24.54030299525847 30 24.584817504741636 25.556275153814127 25.359670629597076 24.499236711847157 31 24.487105354458194 25.227246443853357 25.955822828726728 24.32982537296172 32 24.078828672541807 25.23766567205607 25.980154048990357 24.70335160641177 33 24.510189447387294 25.04915454187967 26.254308251023573 24.186347759709466 34 24.812064857863206 25.091943654153077 25.607753336571598 24.488238151412116 35 24.484792413553834 24.905747658147334 27.39215913033422 23.21730079796461 36 24.407846039970394 25.534326424870468 25.737879348630642 24.3199481865285 37 24.148220109638473 25.950084426248466 25.663266486248933 24.23842897786413 38 24.321698702380125 24.664029792056994 26.338676473989775 24.675595031573103 39 23.752688918187495 24.68253417528277 26.13281521060301 25.431961695926724 40 23.966693650977216 25.39377818896727 26.275008673528394 24.36451948652712 41 23.729009575796827 24.63107739279271 26.539297774899385 25.100615256511077 42 23.805338391081094 24.42290789656289 26.613313595781097 25.15844011657492 43 23.640022203719123 24.523545193819967 27.014524932926264 24.821907669534646 44 23.304653529466187 24.43796835970025 26.438615968174666 25.818762142658898 45 23.08955500046258 24.6044962531224 27.65750763252845 24.648441113886577 46 24.18817651956703 23.952262003885654 26.295216948838927 25.564344527708393 47 22.6424259246409 24.497490343025007 27.592348437536142 25.267735294797955 48 23.10450108710737 24.335014109265856 26.99033168339733 25.57015312022945 49 23.355537052456288 24.208992506244794 27.16717550189657 25.268294939402352 50 23.08955500046258 24.53742251827181 27.743084466648167 24.629938014617448 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 4.0 4 8.0 5 9.5 6 11.0 7 13.5 8 16.0 9 25.5 10 35.0 11 49.5 12 64.0 13 95.0 14 126.0 15 184.0 16 242.0 17 217.0 18 192.0 19 162.5 20 133.0 21 142.5 22 152.0 23 157.0 24 162.0 25 187.0 26 212.0 27 262.0 28 312.0 29 395.5 30 479.0 31 597.0 32 715.0 33 944.5 34 1174.0 35 1262.5 36 1351.0 37 1529.0 38 1707.0 39 1888.0 40 2069.0 41 2254.5 42 2440.0 43 2497.0 44 2554.0 45 2796.5 46 3039.0 47 3142.5 48 3246.0 49 3244.5 50 3243.0 51 3416.0 52 3589.0 53 3376.0 54 3163.0 55 3119.0 56 3075.0 57 2861.0 58 2647.0 59 2301.0 60 1955.0 61 1808.0 62 1661.0 63 1389.0 64 1117.0 65 1003.0 66 889.0 67 731.5 68 574.0 69 413.0 70 252.0 71 215.5 72 179.0 73 158.5 74 138.0 75 115.0 76 92.0 77 87.5 78 83.0 79 72.5 80 62.0 81 51.0 82 40.0 83 28.0 84 16.0 85 15.5 86 15.0 87 9.5 88 4.0 89 2.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.011564437043204737 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0023128874086409475 16 0.0 17 0.0 18 0.0023128874086409475 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0023128874086409475 26 0.011564437043204737 27 0.011564437043204737 28 0.0023128874086409475 29 0.0023128874086409475 30 0.004625774817281895 31 0.0023128874086409475 32 0.006938662225922843 33 0.011564437043204737 34 0.006938662225922843 35 0.0023128874086409475 36 0.00925154963456379 37 0.006938662225922843 38 0.006938662225922843 39 0.006938662225922843 40 0.0023128874086409475 41 0.004625774817281895 42 0.004625774817281895 43 0.0 44 0.0 45 0.0 46 0.0 47 0.006938662225922843 48 0.004625774817281895 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 43236.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.18262558978628 #Duplication Level Percentage of deduplicated Percentage of total 1 72.55855855855856 46.56998797298548 2 15.102702702702702 19.38662225922842 3 6.162162162162162 11.865112406328059 4 2.774774774774775 7.123693218614117 5 1.4486486486486487 4.648903691368305 6 0.8108108108108109 3.122398001665279 7 0.3963963963963964 1.7809233046535293 8 0.23783783783783785 1.2212045517624202 9 0.16216216216216214 0.9367194004995838 >10 0.3387387387387387 3.0160051808677957 >50 0.007207207207207207 0.32843001202701455 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGT 86 0.19890831714312146 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 56 0.12952169488389303 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0023128874086409475 0.0 17 0.0 0.0 0.0 0.0023128874086409475 0.0 18 0.0 0.0 0.0 0.0023128874086409475 0.0 19 0.0 0.0 0.0 0.0023128874086409475 0.0 20 0.0 0.0 0.0 0.0023128874086409475 0.0 21 0.0 0.0 0.0 0.0023128874086409475 0.0 22 0.0 0.0 0.0 0.0023128874086409475 0.0 23 0.0 0.0 0.0 0.0023128874086409475 0.0 24 0.0 0.0 0.0 0.0023128874086409475 0.0 25 0.0 0.0 0.0 0.0023128874086409475 0.0 26 0.0 0.0 0.0 0.0023128874086409475 0.0 27 0.0 0.0 0.0 0.0023128874086409475 0.0 28 0.0 0.0 0.0 0.023128874086409474 0.0 29 0.0 0.0 0.0 0.07169950966786937 0.0 30 0.0 0.0 0.0 0.13877324451845685 0.0 31 0.0 0.0 0.0 0.2983624757146822 0.0 32 0.0 0.0 0.0 0.4926450180405218 0.0 33 0.0 0.0 0.0 0.7169950966786937 0.0 34 0.0 0.0 0.0 0.8858358775094828 0.0 35 0.0 0.0 0.0 1.103247293921732 0.0 36 0.0 0.0 0.0 1.4339901933573873 0.0 37 0.0 0.0 0.0 1.8549357017300399 0.0 38 0.0 0.0 0.0 2.426218891664354 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTACCT 20 7.772543E-4 44.000004 24 GGTATCA 20 7.772543E-4 44.000004 1 TAGACGT 25 0.0023278487 35.2 4 ACCTGCA 30 0.0056846887 29.333332 27 GGCCGTG 45 0.0013765364 24.444443 7 GTATCAA 65 4.827137E-4 20.307693 1 CAACGCA 80 0.0019468714 16.5 5 TCAACGC 80 0.0019468714 16.5 4 AACGCAG 90 0.0042693242 14.666666 6 ATCAACG 100 0.008582744 13.2 3 CTTATAC 150 7.525513E-4 11.733334 44 TCTTATA 160 0.0012921625 11.000001 43 CTCTTAT 180 0.003441568 9.777777 42 TCTCTTA 220 0.0017499692 9.0 41 >>END_MODULE