##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064023_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1766726 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.348543577215708 32.0 32.0 32.0 32.0 32.0 2 31.431403624557515 32.0 32.0 32.0 32.0 32.0 3 31.489823549322306 32.0 32.0 32.0 32.0 32.0 4 31.56896428761449 32.0 32.0 32.0 32.0 32.0 5 31.515168735842458 32.0 32.0 32.0 32.0 32.0 6 35.1083988122663 36.0 36.0 36.0 36.0 36.0 7 35.127407419147055 36.0 36.0 36.0 36.0 36.0 8 35.07155608736159 36.0 36.0 36.0 36.0 36.0 9 35.18231236762237 36.0 36.0 36.0 36.0 36.0 10 35.02818829858167 36.0 36.0 36.0 36.0 36.0 11 35.168536603865 36.0 36.0 36.0 36.0 36.0 12 35.074464291576625 36.0 36.0 36.0 36.0 36.0 13 35.11474671228023 36.0 36.0 36.0 36.0 36.0 14 35.05606019269541 36.0 36.0 36.0 36.0 36.0 15 35.03181421454148 36.0 36.0 36.0 36.0 36.0 16 35.0389539747533 36.0 36.0 36.0 36.0 36.0 17 34.99685067180763 36.0 36.0 36.0 36.0 36.0 18 34.99320324713623 36.0 36.0 36.0 36.0 36.0 19 34.99315796563813 36.0 36.0 36.0 36.0 36.0 20 34.9885103858776 36.0 36.0 36.0 36.0 36.0 21 34.97924352729286 36.0 36.0 36.0 36.0 36.0 22 34.965916616385336 36.0 36.0 36.0 36.0 36.0 23 34.909424551401855 36.0 36.0 36.0 32.0 36.0 24 34.87885614407667 36.0 36.0 36.0 32.0 36.0 25 34.851891577980965 36.0 36.0 36.0 32.0 36.0 26 34.78866049404378 36.0 36.0 36.0 32.0 36.0 27 34.78909293235058 36.0 36.0 36.0 32.0 36.0 28 34.76639558143142 36.0 36.0 36.0 32.0 36.0 29 34.73066791341725 36.0 36.0 36.0 32.0 36.0 30 34.716419524023536 36.0 36.0 36.0 32.0 36.0 31 34.70455577152315 36.0 36.0 36.0 32.0 36.0 32 34.67070049345512 36.0 36.0 36.0 32.0 36.0 33 34.64475589310397 36.0 36.0 36.0 32.0 36.0 34 34.643501029588066 36.0 36.0 36.0 32.0 36.0 35 34.59826820910543 36.0 36.0 36.0 32.0 36.0 36 34.5723632300651 36.0 36.0 36.0 32.0 36.0 37 34.56829581949889 36.0 36.0 36.0 32.0 36.0 38 34.52627911741832 36.0 36.0 36.0 32.0 36.0 39 34.528503571012145 36.0 36.0 36.0 32.0 36.0 40 34.50672883061663 36.0 36.0 36.0 32.0 36.0 41 34.495229594175896 36.0 36.0 36.0 32.0 36.0 42 34.42433461668646 36.0 36.0 36.0 32.0 36.0 43 34.4110869484006 36.0 36.0 36.0 32.0 36.0 44 34.34566197588081 36.0 36.0 36.0 32.0 36.0 45 34.32294764439987 36.0 36.0 36.0 32.0 36.0 46 34.30424242355634 36.0 36.0 36.0 32.0 36.0 47 34.279417408245536 36.0 36.0 36.0 32.0 36.0 48 34.2366377129221 36.0 36.0 36.0 32.0 36.0 49 34.220339769720944 36.0 36.0 36.0 32.0 36.0 50 33.608719178865314 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 6.0 20 15.0 21 60.0 22 190.0 23 600.0 24 1479.0 25 3398.0 26 6802.0 27 12211.0 28 20480.0 29 31342.0 30 45269.0 31 63783.0 32 91033.0 33 146061.0 34 303862.0 35 1040133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.89063173970979 17.591880818439222 11.563516440221852 26.953971001629135 2 16.782191611790903 20.167508340323696 35.55660835515345 27.493691692731947 3 18.402746332186197 23.67851159210288 28.328993841695343 29.589748234015577 4 12.937999440773499 15.44908491752541 34.804321666178005 36.80859397552309 5 15.050664336178897 35.977848291132865 32.74774922653541 16.223738146152826 6 35.225705882752486 34.74458942087163 16.17689010847195 13.85281458790394 7 30.950469965348333 29.837620547838206 20.525650270613554 18.686259216199907 8 28.824730037368557 31.875910582625718 19.104037637981214 20.195321742024515 9 27.833937000163584 13.769207387999002 18.00200712853264 40.39484848330478 10 16.5644331516205 25.89178624412537 30.543095148205108 27.000685456049023 11 38.20453098246756 20.584131656030223 21.77373388614527 19.437603475356944 12 25.30749036916957 23.088748541083433 27.793337038877652 23.81042405086935 13 29.847405888788952 18.623907788078768 24.879479575913006 26.649206747219274 14 24.363893645021157 18.92009226110459 24.082751984604283 32.63326210926998 15 25.7473475191436 26.395920409725083 21.52211419592358 26.334617875207737 16 26.731068787668843 25.011490271193043 22.715077499898115 25.542363441239996 17 25.031329136493152 25.161513443510763 24.21597916145458 25.591178258541508 18 26.044674827165792 23.99477676736917 25.032744257444012 24.927804148021025 19 26.38711379127267 24.12094461733172 24.585645991511985 24.906295599883627 20 26.729913778123425 23.344319787900865 23.896868832147238 26.028897601828472 21 27.84489502050686 23.41370421899038 23.536756690058333 25.204644070444427 22 27.013372199974526 23.255005730942845 24.069903352247803 25.66171871683482 23 25.369795649449628 23.0975044701506 24.742984028586324 26.789715851813444 24 25.793235936218494 23.928706262852213 24.348976832195728 25.92908096873357 25 25.8077352169215 23.497947301719194 24.41293055579926 26.281386925560042 26 25.684730095746456 24.45375273470335 24.550999210367674 25.310517959182516 27 26.37834074384352 23.709141956318085 23.966580533047292 25.945936766791107 28 25.603794731300873 23.659900603398505 24.81490496190552 25.92139970339511 29 25.545185269879937 23.897417378118327 24.71595234712539 25.84144500487634 30 25.283796794985363 24.271043415603035 24.92266519647993 25.52249459293167 31 26.20426106163131 23.812437662812563 23.77898360807924 26.204317667476886 32 25.85100204790675 23.818095163702353 23.687681201257497 26.643221587133393 33 25.463656622683555 23.459709067320706 24.418409170283184 26.658225139712556 34 26.407236130843554 23.468350418013348 24.43620555954921 25.688207891593883 35 26.734522681501254 23.41134397701454 24.51901360856113 25.335119732923072 36 25.510659820320196 24.177184593795833 24.171014504238965 26.141141081645003 37 26.56127860384213 23.871992446836632 24.066878099392248 25.49985084992899 38 25.61960688416872 23.70650128721547 24.43694229153789 26.23694953707792 39 26.348149024460238 23.687086897727525 23.806464503982934 26.158299573829304 40 26.410325785482858 23.860464010541783 24.430062195616195 25.29914800835916 41 25.3982207213454 24.284940433164977 24.71416579544239 25.602673050047237 42 26.729933361672405 24.213038878678393 24.161813459096926 24.895214300552272 43 26.05588161877037 23.22998994169352 24.542154605849667 26.17197383368644 44 25.672409557673998 23.980900047885726 24.049219281532977 26.2974711129073 45 25.70074149544348 24.208354559347935 24.234674817456277 25.856229127752307 46 25.521124305134574 23.90246497866938 24.445508569888986 26.13090214630706 47 25.70562547581784 23.76980746535197 24.738961733632575 25.785605325197615 48 26.521620510986004 24.38764432258525 23.776901820454157 25.31383334597459 49 25.59693851271535 24.480521281491214 23.878446140113645 26.04409406567979 50 25.704459534648887 24.59527856596644 23.94287910459504 25.757382794789635 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 27.5 2 34.0 3 106.0 4 178.0 5 224.5 6 271.0 7 244.5 8 218.0 9 312.5 10 407.0 11 582.0 12 757.0 13 1417.5 14 2078.0 15 2704.0 16 3330.0 17 3371.5 18 3413.0 19 3325.5 20 3238.0 21 3562.0 22 3886.0 23 4365.5 24 4845.0 25 5700.0 26 6555.0 27 8110.0 28 9665.0 29 11544.5 30 13424.0 31 15353.5 32 17283.0 33 20781.0 34 24279.0 35 29169.0 36 34059.0 37 43054.0 38 52049.0 39 58513.0 40 64977.0 41 73384.5 42 81792.0 43 86000.5 44 90209.0 45 100713.5 46 111218.0 47 120605.0 48 129992.0 49 136614.5 50 143237.0 51 139569.0 52 135901.0 53 136394.5 54 136888.0 55 138408.0 56 139928.0 57 136991.5 58 134055.0 59 123567.0 60 113079.0 61 99569.0 62 86059.0 63 75680.5 64 65302.0 65 56230.5 66 47159.0 67 40701.5 68 34244.0 69 30960.0 70 27676.0 71 21517.5 72 15359.0 73 13225.5 74 11092.0 75 8768.0 76 6444.0 77 5575.5 78 4707.0 79 3960.5 80 3214.0 81 2560.0 82 1906.0 83 1557.0 84 1208.0 85 872.0 86 536.0 87 382.0 88 228.0 89 181.0 90 134.0 91 111.0 92 88.0 93 61.5 94 35.0 95 36.5 96 38.0 97 28.0 98 18.0 99 15.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008150669656754924 2 4.528149809308291E-4 3 3.3961123569812185E-4 4 0.0 5 0.0 6 1.1320374523270727E-4 7 0.0 8 0.0 9 0.0013018430701761338 10 0.0010754355797107191 11 5.6601872616353635E-5 12 2.2640749046541454E-4 13 7.358243440125973E-4 14 5.6601872616353635E-5 15 0.004414946064075584 16 7.924262166289509E-4 17 0.0 18 2.2640749046541454E-4 19 0.0 20 2.830093630817682E-4 21 0.0 22 5.6601872616353635E-5 23 3.9621310831447547E-4 24 3.9621310831447547E-4 25 0.0015282505606415483 26 0.004584751681924645 27 0.005150770408088181 28 0.0037357235926793403 29 0.0018678617963396702 30 0.0032263067391321574 31 0.007018632204427852 32 0.0024904823951195604 33 0.0035659179748302795 34 0.002037667414188731 35 0.0024904823951195604 36 0.007867660293673157 37 0.0027734917582013284 38 0.006905428459195144 39 0.0035659179748302795 40 0.002377278649886853 41 0.0031131029938994506 42 0.001415046815408841 43 0.0015282505606415483 44 0.0011320374523270727 45 0.0014716486880251946 46 9.622318344780118E-4 47 0.001754658051106963 48 0.0013584449427924874 49 1.6980561784906093E-4 50 9.622318344780118E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1766726.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.92256178001307 #Duplication Level Percentage of deduplicated Percentage of total 1 77.82393784401548 41.18642158513806 2 12.853406549947321 13.604704044464237 3 3.8951773458619594 6.1842829119146066 4 1.7368851890614274 3.6768165489157227 5 0.9432634979910111 2.4959960373630254 6 0.5983575885276349 1.899996986723604 7 0.39902203237894684 1.4782087712112832 8 0.2875050696790546 1.2172403849725384 9 0.2231681213401286 1.0629565820057167 >10 1.0896119062747809 9.984101904440122 >50 0.06705082226811493 2.4666052872276736 >100 0.06775050603821657 7.831849216830024 >500 0.010662964746250291 3.822953301232272 >1k 0.004200561869734963 3.0878664375612015 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2107 0.11926014560265713 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2044 0.11569422762782684 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1914 0.10833598418770088 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1904 0.10776996546153733 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1866 0.10561909430211588 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1855 0.104996473703336 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1803 0.1020531763272856 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1782 0.10086453700234219 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1320374523270728E-4 2 0.0 0.0 0.0 0.0 1.1320374523270728E-4 3 0.0 0.0 0.0 0.0 1.1320374523270728E-4 4 0.0 0.0 0.0 0.0 1.1320374523270728E-4 5 0.0 0.0 0.0 0.0 1.1320374523270728E-4 6 0.0 0.0 0.0 0.0 1.6980561784906093E-4 7 0.0 0.0 0.0 0.0 1.6980561784906093E-4 8 0.0 0.0 0.0 0.0 1.6980561784906093E-4 9 0.0 0.0 0.0 0.0 1.6980561784906093E-4 10 0.0 0.0 0.0 0.0 1.6980561784906093E-4 11 0.0 0.0 0.0 0.0 1.6980561784906093E-4 12 0.0 0.0 0.0 0.0 1.6980561784906093E-4 13 0.0 0.0 0.0 0.0 1.6980561784906093E-4 14 0.0 0.0 0.0 0.0 1.6980561784906093E-4 15 0.0 0.0 0.0 0.0 2.2640749046541457E-4 16 0.0 0.0 0.0 0.0 2.830093630817682E-4 17 0.0 0.0 0.0 0.0 2.830093630817682E-4 18 0.0 0.0 0.0 0.0 3.3961123569812185E-4 19 0.0 0.0 0.0 0.0 3.3961123569812185E-4 20 0.0 0.0 0.0 1.1320374523270728E-4 3.3961123569812185E-4 21 0.0 0.0 0.0 1.1320374523270728E-4 3.3961123569812185E-4 22 0.0 0.0 0.0 1.1320374523270728E-4 4.5281498093082914E-4 23 0.0 0.0 0.0 1.6980561784906093E-4 5.660187261635364E-4 24 0.0 0.0 0.0 5.094168535471828E-4 5.660187261635364E-4 25 0.0 0.0 0.0 5.660187261635364E-4 5.660187261635364E-4 26 0.0 0.0 0.0 7.924262166289509E-4 6.2262059877989E-4 27 0.0 0.0 0.0 0.0011886393249434263 6.2262059877989E-4 28 0.0 0.0 0.0 0.003396112356981218 6.2262059877989E-4 29 0.0 0.0 0.0 0.008433679019836693 6.2262059877989E-4 30 0.0 0.0 0.0 0.018452210472931288 6.2262059877989E-4 31 0.0 0.0 0.0 0.042055191353950756 6.2262059877989E-4 32 0.0 0.0 0.0 0.06769583964915896 6.2262059877989E-4 33 0.0 0.0 0.0 0.09775143400844273 6.2262059877989E-4 34 0.0 0.0 0.0 0.12910887143790264 6.2262059877989E-4 35 0.0 0.0 0.0 0.16754154294440676 6.2262059877989E-4 36 0.0 0.0 0.0 0.22040769196808108 6.2262059877989E-4 37 0.0 0.0 0.0 0.2926882832991647 6.2262059877989E-4 38 0.0 0.0 0.0 0.3941754409002867 6.792224713962437E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2385 0.0 25.733995 1 GTATTAC 135 1.1459633E-10 21.18366 1 GTTCGCG 75 5.470347E-5 20.535341 38 GGTATCA 1045 0.0 20.41958 1 TATCGTT 65 4.937684E-4 20.30508 17 TACCGTA 65 4.937684E-4 20.30508 7 TATACTG 275 0.0 18.397633 5 ACCGTCG 490 0.0 17.956873 8 GTACCGT 160 1.1041266E-9 17.8727 6 AACGCAG 3425 0.0 17.790411 6 ATACCGT 550 0.0 17.197788 6 TCAACGC 3585 0.0 17.180496 4 TTAACGG 155 1.438093E-8 17.034407 35 ATCAACG 3625 0.0 16.990917 3 GTAAACG 520 0.0 16.92569 27 CAACGCA 3675 0.0 16.75975 5 TATCAAC 3720 0.0 16.734406 2 TACCGTC 540 0.0 16.701555 7 CGTCGTA 545 0.0 16.549267 10 TAAACGC 535 0.0 16.450674 28 >>END_MODULE