##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064022_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1673907 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39240650764947 32.0 32.0 32.0 32.0 32.0 2 31.47060559517345 32.0 32.0 32.0 32.0 32.0 3 31.517963064853664 32.0 32.0 32.0 32.0 32.0 4 31.58718793815905 32.0 32.0 32.0 32.0 32.0 5 31.567391139412166 32.0 32.0 32.0 32.0 32.0 6 35.15810436302614 36.0 36.0 36.0 36.0 36.0 7 35.168109697850596 36.0 36.0 36.0 36.0 36.0 8 35.11491259669743 36.0 36.0 36.0 36.0 36.0 9 35.20999255036271 36.0 36.0 36.0 36.0 36.0 10 35.09028339089328 36.0 36.0 36.0 36.0 36.0 11 35.201662935873976 36.0 36.0 36.0 36.0 36.0 12 35.11898868933579 36.0 36.0 36.0 36.0 36.0 13 35.15229997843369 36.0 36.0 36.0 36.0 36.0 14 35.10920558907992 36.0 36.0 36.0 36.0 36.0 15 35.08322445631687 36.0 36.0 36.0 36.0 36.0 16 35.10261740944987 36.0 36.0 36.0 36.0 36.0 17 35.09231277484353 36.0 36.0 36.0 36.0 36.0 18 35.08797740854181 36.0 36.0 36.0 36.0 36.0 19 35.048322278358356 36.0 36.0 36.0 36.0 36.0 20 35.04375571641674 36.0 36.0 36.0 36.0 36.0 21 35.02116903746743 36.0 36.0 36.0 36.0 36.0 22 34.987237642234604 36.0 36.0 36.0 36.0 36.0 23 34.9727720835148 36.0 36.0 36.0 36.0 36.0 24 34.945087152392574 36.0 36.0 36.0 36.0 36.0 25 34.89496011427158 36.0 36.0 36.0 36.0 36.0 26 34.85549436139523 36.0 36.0 36.0 32.0 36.0 27 34.81354818397916 36.0 36.0 36.0 32.0 36.0 28 34.75879305122686 36.0 36.0 36.0 32.0 36.0 29 34.73201677273588 36.0 36.0 36.0 32.0 36.0 30 34.67577529695497 36.0 36.0 36.0 32.0 36.0 31 34.68247877570259 36.0 36.0 36.0 32.0 36.0 32 34.64004989524508 36.0 36.0 36.0 32.0 36.0 33 34.676569845278145 36.0 36.0 36.0 32.0 36.0 34 34.65303030574578 36.0 36.0 36.0 32.0 36.0 35 34.63223046441648 36.0 36.0 36.0 32.0 36.0 36 34.57754940985372 36.0 36.0 36.0 32.0 36.0 37 34.50522520068319 36.0 36.0 36.0 32.0 36.0 38 34.44215598596577 36.0 36.0 36.0 32.0 36.0 39 34.32294267244237 36.0 36.0 36.0 32.0 36.0 40 34.390417149817765 36.0 36.0 36.0 32.0 36.0 41 34.380321009470656 36.0 36.0 36.0 32.0 36.0 42 34.347244500441185 36.0 36.0 36.0 32.0 36.0 43 34.37219630481263 36.0 36.0 36.0 32.0 36.0 44 34.23920922727487 36.0 36.0 36.0 32.0 36.0 45 34.22745648354419 36.0 36.0 36.0 32.0 36.0 46 34.092774568718575 36.0 36.0 36.0 32.0 36.0 47 34.13337001398524 36.0 36.0 36.0 32.0 36.0 48 34.06238518627379 36.0 36.0 36.0 32.0 36.0 49 34.04090310871512 36.0 36.0 36.0 32.0 36.0 50 33.54201398285568 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 3.0 20 10.0 21 49.0 22 116.0 23 442.0 24 1179.0 25 2842.0 26 5768.0 27 11356.0 28 19278.0 29 30090.0 30 43686.0 31 62440.0 32 89499.0 33 142511.0 34 286978.0 35 977659.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.92816315654576 20.031676822328397 12.327194928362704 26.71296509276314 2 12.767922537693455 20.714404342439025 44.035000937930505 22.482672181937012 3 18.89056627669889 25.248655982230705 29.761592545308886 26.099185195761514 4 11.085382879694034 17.062357705655092 38.96303677563927 32.88922263901161 5 11.559722254581645 39.72968629678949 35.76190314037757 12.948688308251294 6 31.996358211915503 38.4220591037832 17.525746712921837 12.055835971379466 7 27.902718493582373 31.122196301462747 22.121386817053537 18.853698387901343 8 23.85974848065036 41.20228901605645 19.422524668335818 15.515437834957376 9 26.756736573898444 14.151211104705522 19.99820776218199 39.09384455921404 10 15.712152956378828 28.44907876209235 33.910133826078074 21.928634455450748 11 35.736931621649234 20.001768318072628 27.07545879191616 17.185841268361983 12 26.0884448432465 23.058040434864168 32.39341371239177 18.46010100949757 13 30.798177431042816 21.709348402324867 25.73760335886053 21.754870807771788 14 19.97225644034119 24.1934713023821 25.989932505009257 29.84433975226746 15 21.409444810874366 36.72535918098133 21.44684456042748 20.418351447716823 16 20.675047508896903 26.809893320795723 31.67823348748459 20.83682568282278 17 20.23565227936797 30.084467058205743 28.816535207750487 20.863345454675798 18 20.816464056118015 26.096346199685645 34.17752901754644 18.909660726649903 19 25.468738705316362 24.58422122614936 26.074148683290048 23.872891385244223 20 25.117734526639396 27.882726076278473 27.363995189656688 19.635544207425447 21 23.46002495957063 25.681116095458112 25.36246039953235 25.496398545438904 22 24.541266728119847 30.177316128831837 26.01321581955466 19.268201323493656 23 20.842072940146114 29.662170760018714 28.49196454014683 21.003791759688344 24 24.999029213794604 26.21959124225387 28.874527227117973 19.90685231683355 25 22.551323747643206 28.36421161800937 28.74332988426916 20.34113475007826 26 18.763655264502137 30.580384214409683 30.426722348182732 20.229238172905443 27 21.026111321876336 28.99584477191054 28.622979516607472 21.35506438960566 28 19.82320795827058 29.75539346564856 27.123407321288706 23.29799125479215 29 22.03787774239049 26.613890417293213 26.48389141498776 24.86434042532854 30 19.81781977576072 27.939219888196998 28.76683930394656 23.47612103209572 31 24.075312122673157 25.780851855768468 27.578100121819997 22.565735899738375 32 21.314941446506086 29.396171948091055 27.4791588752663 21.809727730136558 33 19.931749219005308 29.38212849954028 30.415389404042354 20.270732877412062 34 22.02736311720402 28.821065573623585 29.72908709753928 19.42248421163312 35 20.800544848434157 29.737851433214246 29.372767137036547 20.088836581315046 36 19.174003934850916 28.885067820316042 30.291481280780232 21.649446964052814 37 20.857394801647473 28.458130356701183 26.501190676756053 24.183284164895287 38 21.50913839056067 30.382377911329144 26.684184081019836 21.42429961709035 39 24.34572521355113 26.061183937752634 27.388313564395123 22.20477728430111 40 25.475948237287387 26.46258458696589 28.540047040718242 19.52142013502849 41 23.817793924273573 25.32265609457529 30.567061029094162 20.292488952056974 42 22.64713982652146 29.82268005761509 28.73537742245949 18.794802693403955 43 19.89010017396624 29.618947026324342 29.940414173469193 20.550538626240225 44 19.27864731286476 29.61270291890174 28.423193257832235 22.685456510401263 45 19.84624970801424 30.0817918576149 28.257291578921585 21.814666855449275 46 21.013177145595 26.24645808578019 28.533177050008874 24.207187718615934 47 24.012500343514507 26.48299692808419 28.146443519643654 21.35805920875765 48 20.722370879102826 28.079721508808593 27.0539591618739 24.14394845021468 49 22.938173276364715 26.963135281354244 27.622073906269417 22.476617536011624 50 20.723981738258733 30.922550096123864 26.139596459009656 22.213871706607755 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 12.0 1 13.5 2 15.0 3 51.0 4 87.0 5 113.0 6 139.0 7 151.0 8 163.0 9 219.0 10 275.0 11 439.5 12 604.0 13 1053.5 14 1503.0 15 1976.5 16 2450.0 17 2724.5 18 2999.0 19 3280.5 20 3562.0 21 4488.5 22 5415.0 23 6475.5 24 7536.0 25 11379.5 26 15223.0 27 23753.5 28 32284.0 29 42889.5 30 53495.0 31 66208.5 32 78922.0 33 100435.5 34 121949.0 35 146152.5 36 170356.0 37 168252.0 38 166148.0 39 148489.5 40 130831.0 41 116433.5 42 102036.0 43 90637.5 44 79239.0 45 79124.5 46 79010.0 47 80592.0 48 82174.0 49 82509.0 50 82844.0 51 77450.0 52 72056.0 53 69641.0 54 67226.0 55 66836.5 56 66447.0 57 64000.5 58 61554.0 59 56348.0 60 51142.0 61 44845.5 62 38549.0 63 33740.5 64 28932.0 65 24982.0 66 21032.0 67 18272.5 68 15513.0 69 14229.0 70 12945.0 71 9651.5 72 6358.0 73 5531.0 74 4704.0 75 3707.5 76 2711.0 77 2360.0 78 2009.0 79 1673.0 80 1337.0 81 1131.0 82 925.0 83 756.0 84 587.0 85 445.0 86 303.0 87 220.0 88 137.0 89 99.5 90 62.0 91 50.0 92 38.0 93 31.0 94 24.0 95 23.5 96 23.0 97 15.5 98 8.0 99 11.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007646780854611397 2 5.376642788398638E-4 3 4.779238034132123E-4 4 0.0 5 0.0 6 2.3896190170660616E-4 7 1.1948095085330308E-4 8 0.0 9 0.001314290459386334 10 0.0010753285576797277 11 0.0 12 2.987023771332577E-4 13 3.584428525599092E-4 14 2.987023771332577E-4 15 0.005914307067238503 16 5.974047542665154E-4 17 0.0 18 3.584428525599092E-4 19 0.0 20 8.363666559731216E-4 21 0.0 22 2.3896190170660616E-4 23 8.363666559731216E-4 24 3.584428525599092E-4 25 0.0013740309348129855 26 0.006093528493518457 27 0.006690933247784973 28 0.004540276132425517 29 0.0028675428204792738 30 0.0041818332798656075 31 0.007527299903758094 32 0.003166245197612532 33 0.004779238034132123 34 0.0028675428204792738 35 0.002807802345052622 36 0.008722109412291124 37 0.004122092804438956 38 0.008602628461437821 39 0.004122092804438956 40 0.0022701380662127585 41 0.003942871378159001 42 0.0023896190170660616 43 0.0011350690331063792 44 0.0014337714102396369 45 0.0014337714102396369 46 0.0014337714102396369 47 0.0019714356890795006 48 0.0017922142627995463 49 1.792214262799546E-4 50 0.0014935118856662885 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1673907.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.782893694077444 #Duplication Level Percentage of deduplicated Percentage of total 1 70.54472315061422 31.59196837532081 2 15.101446364430787 13.525729343302325 3 5.964708386687281 8.013507047915661 4 2.893172884078107 5.182586148250293 5 1.5888861718363168 3.5577460262667717 6 0.9509275936001392 2.5551173600975954 7 0.6257245321262764 1.9615228642791174 8 0.4222726618643438 1.5128473380948817 9 0.288510761931632 1.1628312103063407 >10 1.3878902173997443 11.16072215267095 >50 0.11690061997277239 3.6616815623685803 >100 0.10048227765488801 9.329414819930449 >500 0.009256561387385958 2.936293865803386 >1k 0.0049636633526562385 3.4935739046615386 >5k 1.3415306358530374E-4 0.35445798073125273 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 5900 0.3524688050172441 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 4163 0.24869959920115034 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 4064 0.24278529213391187 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 4053 0.2421281469042187 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2588 0.1546083504041742 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 2495 0.1490524861894956 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 2439 0.1457070195656031 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 1748 0.10442635104578687 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 1728 0.10323154153725386 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 5.974047542665154E-5 0.0 4 0.0 0.0 0.0 5.974047542665154E-5 0.0 5 0.0 0.0 0.0 1.1948095085330308E-4 0.0 6 0.0 0.0 0.0 1.1948095085330308E-4 0.0 7 0.0 0.0 0.0 1.1948095085330308E-4 0.0 8 0.0 0.0 0.0 1.1948095085330308E-4 0.0 9 0.0 0.0 0.0 1.1948095085330308E-4 0.0 10 0.0 0.0 0.0 1.1948095085330308E-4 0.0 11 0.0 0.0 0.0 1.1948095085330308E-4 0.0 12 0.0 0.0 0.0 1.1948095085330308E-4 0.0 13 0.0 0.0 0.0 1.1948095085330308E-4 0.0 14 0.0 0.0 0.0 1.1948095085330308E-4 0.0 15 0.0 0.0 0.0 1.1948095085330308E-4 0.0 16 0.0 0.0 0.0 1.792214262799546E-4 0.0 17 0.0 0.0 0.0 1.792214262799546E-4 0.0 18 0.0 0.0 0.0 1.792214262799546E-4 0.0 19 0.0 0.0 0.0 1.792214262799546E-4 0.0 20 0.0 0.0 0.0 2.3896190170660616E-4 0.0 21 0.0 0.0 0.0 2.987023771332577E-4 0.0 22 0.0 0.0 0.0 4.779238034132123E-4 0.0 23 0.0 0.0 0.0 5.974047542665154E-4 0.0 24 0.0 0.0 0.0 6.57145229693167E-4 0.0 25 0.0 0.0 0.0 6.57145229693167E-4 0.0 26 0.0 0.0 0.0 6.57145229693167E-4 0.0 27 0.0 0.0 0.0 9.558476068264246E-4 0.0 28 0.0 0.0 0.0 0.003405207099319138 0.0 29 0.0 0.0 0.0 0.009677957019117549 0.0 30 0.0 0.0 0.0 0.022342937809567677 0.0 31 0.0 0.0 0.0 0.054423573113679555 0.0 32 0.0 0.0 0.0 0.09164188930448346 0.0 33 0.0 0.0 0.0 0.12730695313419443 0.0 34 0.0 0.0 0.0 0.1661980026369446 0.0 35 0.0 0.0 0.0 0.2049098307134148 0.0 36 0.0 0.0 0.0 0.2693698036987718 0.0 37 0.0 0.0 0.0 0.37630525471247805 0.0 38 0.0 0.0 0.0 0.5154408219811495 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGT 50 2.3624452E-6 30.799541 4 GGTATCA 705 0.0 30.581102 1 GTATCAA 2120 0.0 28.433537 1 ACCGATG 55 1.5941366E-4 23.999643 8 TAGGACC 2440 0.0 23.622597 4 TGTAGGA 6755 0.0 22.178131 2 CCGTAGG 50 0.0025806245 22.00033 9 ATATGCG 70 3.2166783E-5 21.99967 15 CTGTAGG 6600 0.0 21.933006 1 GTCCTAC 5930 0.0 21.406088 1 ACTGTTC 1785 0.0 21.321812 8 GATATAC 1835 0.0 21.220394 1 GTAGGAC 7045 0.0 21.10906 3 ATACACT 1845 0.0 21.105375 4 GTCCTAA 3360 0.0 20.624693 1 TCCTACA 6150 0.0 20.603954 2 CCGTCCA 75 5.47362E-5 20.533638 9 CCTACAG 6020 0.0 20.427656 3 TAGGACA 1585 0.0 20.40348 4 TTAGGAC 3745 0.0 20.324856 3 >>END_MODULE