##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064021_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1166734 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26230057579534 32.0 32.0 32.0 32.0 32.0 2 31.367477077037268 32.0 32.0 32.0 32.0 32.0 3 31.45554342292245 32.0 32.0 32.0 32.0 32.0 4 31.54231898616137 32.0 32.0 32.0 32.0 32.0 5 31.478104692243477 32.0 32.0 32.0 32.0 32.0 6 35.06652673188576 36.0 36.0 36.0 36.0 36.0 7 35.086333303049365 36.0 36.0 36.0 36.0 36.0 8 35.02353407031937 36.0 36.0 36.0 36.0 36.0 9 35.145693020002845 36.0 36.0 36.0 36.0 36.0 10 34.98362951623935 36.0 36.0 36.0 36.0 36.0 11 35.136905241468924 36.0 36.0 36.0 36.0 36.0 12 35.03795038114943 36.0 36.0 36.0 36.0 36.0 13 35.08682784593575 36.0 36.0 36.0 36.0 36.0 14 35.01885091203307 36.0 36.0 36.0 36.0 36.0 15 34.9893386153142 36.0 36.0 36.0 36.0 36.0 16 35.004887146513255 36.0 36.0 36.0 36.0 36.0 17 34.964769176178976 36.0 36.0 36.0 36.0 36.0 18 34.95950490857385 36.0 36.0 36.0 36.0 36.0 19 34.96076740713821 36.0 36.0 36.0 36.0 36.0 20 34.950989685738136 36.0 36.0 36.0 36.0 36.0 21 34.945257445141735 36.0 36.0 36.0 36.0 36.0 22 34.93261617472363 36.0 36.0 36.0 36.0 36.0 23 34.875245771529755 36.0 36.0 36.0 32.0 36.0 24 34.84574461702496 36.0 36.0 36.0 32.0 36.0 25 34.80952813580473 36.0 36.0 36.0 32.0 36.0 26 34.75142234648172 36.0 36.0 36.0 32.0 36.0 27 34.75012984964868 36.0 36.0 36.0 32.0 36.0 28 34.7185365301774 36.0 36.0 36.0 32.0 36.0 29 34.688319702691444 36.0 36.0 36.0 32.0 36.0 30 34.661193553972026 36.0 36.0 36.0 32.0 36.0 31 34.659641357841636 36.0 36.0 36.0 32.0 36.0 32 34.61304804694129 36.0 36.0 36.0 32.0 36.0 33 34.586729280195826 36.0 36.0 36.0 32.0 36.0 34 34.565313087644654 36.0 36.0 36.0 32.0 36.0 35 34.53158903400432 36.0 36.0 36.0 32.0 36.0 36 34.49249957573877 36.0 36.0 36.0 32.0 36.0 37 34.47958403543567 36.0 36.0 36.0 32.0 36.0 38 34.429167230919816 36.0 36.0 36.0 32.0 36.0 39 34.41046459604331 36.0 36.0 36.0 32.0 36.0 40 34.38844329555837 36.0 36.0 36.0 32.0 36.0 41 34.366152867748774 36.0 36.0 36.0 32.0 36.0 42 34.28999240615256 36.0 36.0 36.0 32.0 36.0 43 34.28431844790672 36.0 36.0 36.0 32.0 36.0 44 34.20679263653926 36.0 36.0 36.0 32.0 36.0 45 34.17667437479323 36.0 36.0 36.0 32.0 36.0 46 34.12450995685392 36.0 36.0 36.0 32.0 36.0 47 34.09407714183353 36.0 36.0 36.0 32.0 36.0 48 34.040264533304075 36.0 36.0 36.0 32.0 36.0 49 34.00286097773785 36.0 36.0 36.0 32.0 36.0 50 33.40219964447766 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 5.0 20 5.0 21 35.0 22 144.0 23 382.0 24 1050.0 25 2395.0 26 4792.0 27 8658.0 28 14322.0 29 22243.0 30 31420.0 31 44914.0 32 64799.0 33 103413.0 34 211533.0 35 656622.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.08899213111381 17.856885703999588 11.534261370454818 26.519860794431775 2 16.112752929560276 20.232393497027584 36.600732990037095 27.054120583375045 3 18.489399414430785 24.153530214411585 28.22037355750441 29.136696813653224 4 12.19275344680107 15.399825495785672 35.36178769111039 37.04563336630286 5 14.46199390778018 36.896584825675774 32.86798876179146 15.773432504752583 6 35.16523074707816 35.20122873119105 16.20003565514617 13.433504866584615 7 30.85296220046729 30.054751125792166 20.435249165619584 18.65703750812096 8 28.63266177209201 32.778508211811776 18.93319299857551 19.655637017520704 9 27.760816648381788 13.673546352166758 18.16305540318157 40.40258159626989 10 16.082292379135318 26.450093338750236 31.10503137861934 26.362582903495102 11 38.068402909317804 20.53921459390058 22.213289404440086 19.179093092341528 12 25.332638515100296 23.213471474168877 28.48563337595952 22.96825663477131 13 29.87270339857584 19.0548921595853 25.258244451986933 25.814159989851927 14 23.760832616944267 19.48915388380012 24.922025728295555 31.82798777096006 15 25.3547226931668 27.50680131586391 21.864494816943033 25.27398117402626 16 25.994363715216767 25.241316298771093 23.93552556469985 24.828794421312285 17 23.987472723002845 25.83399472373309 25.065353371034014 25.113179182230056 18 25.06796785540417 24.298294032542287 26.610743892321086 24.02299421973245 19 25.990242848841294 24.20740288703338 25.296168621125293 24.506185643000034 20 26.187360025095845 23.76391392330854 24.85834303997422 25.1903830116214 21 27.268169094240847 23.67103384318962 24.15623441161396 24.904562650955572 22 26.221531594230722 24.041339399279355 24.836294881772336 24.900834124717587 23 24.542030041355076 23.92980350982451 25.601319934003296 25.926846514817115 24 25.178619181163047 24.5135112896922 25.267071673946283 25.04079785519847 25 25.09203237482526 24.178779798561596 25.48296104684201 25.246226779771135 26 24.709425914751222 25.24111649020791 25.79003579461298 24.259421800427887 27 25.38507428912329 24.419409972759798 25.025157329740168 25.170358408376746 28 24.64741529309916 24.53170133799618 25.62035537041323 25.200527998491435 29 24.58095339317183 24.380644143804382 25.595185035347683 25.443217427676103 30 24.383892755511365 24.8530016799808 25.92578941954949 24.837316144958344 31 25.473753685798535 24.5211033395049 24.662106562435714 25.34303641226085 32 24.876402260072958 24.777061219451987 24.607950026056667 25.738586494418385 33 24.429598887097477 24.37928513327145 25.4541309134732 25.736985066157875 34 25.40616940360489 24.43239138316592 25.451596949668847 24.709842263560336 35 25.843819561168402 24.26242126222155 25.56833912036541 24.32542005624464 36 24.48188904565411 25.10418791711596 25.113616687895686 25.300306349334246 37 25.52846629489885 24.801787639777213 24.76115946302236 24.90858660230158 38 24.745422752520057 24.731279572104505 25.246948501680038 25.2763491736954 39 25.65669587219738 24.361989724636015 24.5611884725296 25.420125930637006 40 25.912485086191527 24.718437581425967 25.049884117993937 24.31919321438857 41 24.70405617254269 25.122761725255444 25.642350888110048 24.53083121409182 42 26.10100573752085 25.38368706426469 24.791764163379636 23.723543034834826 43 25.00064282885839 24.36089954899127 25.35145596450899 25.28700165764135 44 24.624864255158304 25.16115816170414 24.69197599062664 25.52200159251091 45 24.671557871640154 25.37121160175535 24.780924300603402 25.1763062260011 46 24.668300877674163 24.779552934722986 24.988171969281403 25.56397421832145 47 25.216358289498835 24.55474805412536 25.187301951917334 25.041591704458476 48 25.802127349555587 25.282203803858717 24.02362197975504 24.89204686683066 49 24.81454594075241 25.46131027631905 24.4211390629031 25.30300472002544 50 24.80625204633152 25.751635779560168 24.268420412060458 25.173691762047856 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 32.0 1 31.5 2 31.0 3 96.0 4 161.0 5 188.5 6 216.0 7 224.5 8 233.0 9 302.0 10 371.0 11 582.0 12 793.0 13 1483.5 14 2174.0 15 2827.0 16 3480.0 17 3830.5 18 4181.0 19 4291.0 20 4401.0 21 4735.5 22 5070.0 23 5649.5 24 6229.0 25 6489.5 26 6750.0 27 8453.0 28 10156.0 29 11675.5 30 13195.0 31 15389.0 32 17583.0 33 21147.0 34 24711.0 35 28766.0 36 32821.0 37 38106.0 38 43391.0 39 45901.0 40 48411.0 41 52331.5 42 56252.0 43 57040.5 44 57829.0 45 64003.0 46 70177.0 47 75481.5 48 80786.0 49 83974.5 50 87163.0 51 84621.0 52 82079.0 53 81949.0 54 81819.0 55 83469.0 56 85119.0 57 83848.0 58 82577.0 59 76207.0 60 69837.0 61 61914.5 62 53992.0 63 47460.5 64 40929.0 65 34817.0 66 28705.0 67 24889.0 68 21073.0 69 19029.0 70 16985.0 71 13185.5 72 9386.0 73 8062.5 74 6739.0 75 5186.0 76 3633.0 77 3226.0 78 2819.0 79 2339.5 80 1860.0 81 1527.0 82 1194.0 83 976.0 84 758.0 85 534.0 86 310.0 87 215.5 88 121.0 89 101.0 90 81.0 91 60.0 92 39.0 93 31.0 94 23.0 95 27.5 96 32.0 97 23.5 98 15.0 99 13.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009770864652954315 2 5.142560343660166E-4 3 5.142560343660166E-4 4 0.0 5 0.0 6 1.7141867812200555E-4 7 0.0 8 0.0 9 0.0011999307468540388 10 0.0013713494249760444 11 0.0 12 1.7141867812200555E-4 13 8.570933906100277E-4 14 2.571280171830083E-4 15 0.004114048274928133 16 6.856747124880222E-4 17 0.0 18 5.142560343660166E-4 19 0.0 20 5.999653734270194E-4 21 0.0 22 1.7141867812200555E-4 23 7.713840515490249E-4 24 5.142560343660166E-4 25 0.002142733476525069 26 0.006685328446758216 27 0.00651390976863621 28 0.0054853976999041775 29 0.003256954884318105 30 0.004628304309294149 31 0.008056677871734261 32 0.003942629596806127 33 0.004714013648355152 34 0.0035140829015011133 35 0.003856920257745124 36 0.007885259193612253 37 0.004799722987416155 38 0.008056677871734261 39 0.005142560343660166 40 0.002571280171830083 41 0.003685501579623119 42 0.0023998614937080776 43 0.0013713494249760444 44 0.0019713147984030633 45 0.0011999307468540388 46 0.0011999307468540388 47 0.002999826867135097 48 0.0020570241374640664 49 2.571280171830083E-4 50 0.0010285120687320332 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1166734.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.852222302380284 #Duplication Level Percentage of deduplicated Percentage of total 1 76.90524513644161 42.184236024431456 2 13.718807764270238 15.050141864187438 3 4.457151914318041 7.3345406291895925 4 1.8458678550877756 4.049998157123702 5 0.8921068218215175 2.446702085401192 6 0.5296736739301589 1.7432266866081336 7 0.3221792206520355 1.2370572362689158 8 0.23097579706588775 1.013562861370204 9 0.16691446412446972 0.8240066362474284 >10 0.7663832839505277 7.451247318965058 >50 0.07521286820197033 2.864926489798104 >100 0.07910201326974964 9.168665107784117 >500 0.008334801574197507 3.218736538766689 >1k 0.002044385291784294 1.4129523638580255 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1490 0.12770691520089414 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1421 0.12179297080568492 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1410 0.12085016807601391 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1389 0.11905027195573284 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1324 0.11347916491676767 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1263 0.1082508952340465 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1250 0.10713667382625344 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1229 0.1053367777059724 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1190 0.10199411348259328 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.570933906100276E-5 2 0.0 0.0 0.0 1.7141867812200552E-4 8.570933906100276E-5 3 0.0 0.0 0.0 1.7141867812200552E-4 8.570933906100276E-5 4 0.0 0.0 0.0 2.571280171830083E-4 8.570933906100276E-5 5 0.0 0.0 0.0 2.571280171830083E-4 8.570933906100276E-5 6 0.0 0.0 0.0 2.571280171830083E-4 8.570933906100276E-5 7 0.0 0.0 0.0 4.2854669530501384E-4 8.570933906100276E-5 8 0.0 0.0 0.0 4.2854669530501384E-4 1.7141867812200552E-4 9 0.0 0.0 0.0 4.2854669530501384E-4 1.7141867812200552E-4 10 0.0 0.0 0.0 4.2854669530501384E-4 1.7141867812200552E-4 11 0.0 0.0 0.0 4.2854669530501384E-4 1.7141867812200552E-4 12 0.0 0.0 0.0 4.2854669530501384E-4 4.2854669530501384E-4 13 0.0 0.0 0.0 4.2854669530501384E-4 5.999653734270194E-4 14 0.0 0.0 0.0 4.2854669530501384E-4 5.999653734270194E-4 15 0.0 0.0 0.0 4.2854669530501384E-4 6.856747124880221E-4 16 0.0 0.0 0.0 6.856747124880221E-4 6.856747124880221E-4 17 0.0 0.0 0.0 6.856747124880221E-4 6.856747124880221E-4 18 0.0 0.0 0.0 7.713840515490249E-4 6.856747124880221E-4 19 0.0 0.0 0.0 9.428027296710304E-4 6.856747124880221E-4 20 0.0 0.0 0.0 0.001114221407793036 7.713840515490249E-4 21 0.0 0.0 0.0 0.0011999307468540388 7.713840515490249E-4 22 0.0 0.0 0.0 0.0019713147984030638 7.713840515490249E-4 23 0.0 0.0 0.0 0.0033426642233791077 7.713840515490249E-4 24 0.0 0.0 0.0 0.004542594970233147 7.713840515490249E-4 25 0.0 0.0 0.0 0.005485397699904177 7.713840515490249E-4 26 0.0 0.0 0.0 0.006171072412392199 7.713840515490249E-4 27 0.0 0.0 0.0 0.007885259193612255 8.570933906100277E-4 28 0.0 0.0 0.0 0.011827888790418382 8.570933906100277E-4 29 0.0 0.0 0.0 0.019027473271542614 8.570933906100277E-4 30 0.0 0.0 0.0 0.0339408982681571 8.570933906100277E-4 31 0.0 0.0 0.0 0.060682212055189956 8.570933906100277E-4 32 0.0 0.0 0.0 0.08948054997968688 8.570933906100277E-4 33 0.0 0.0 0.0 0.1146790956636217 8.570933906100277E-4 34 0.0 0.0 0.0 0.14476307367403368 9.428027296710304E-4 35 0.0 0.0 0.0 0.18204663616556988 9.428027296710304E-4 36 0.0 0.0 0.0 0.2358721010958796 9.428027296710304E-4 37 0.0 0.0 0.0 0.3045252816837428 9.428027296710304E-4 38 0.0 0.0 0.0 0.40094828812737093 0.0010285120687320332 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATCG 40 7.0329465E-4 27.499357 5 TATACTG 150 0.0 23.466118 5 GTATGCG 70 3.2168733E-5 21.998543 11 GATATAC 265 0.0 21.58625 1 TAGGACG 410 0.0 20.92634 4 TTAGGAC 315 0.0 20.253494 3 ACCGTAT 55 0.0044841254 19.999533 8 GACGTGA 295 0.0 19.389378 7 GTCGTGT 70 8.1196864E-4 18.858318 1 GGACGTG 470 0.0 18.722967 6 GTATCAA 2905 0.0 18.403902 1 AGGACGT 455 0.0 18.373198 5 GTCCTAC 515 0.0 18.370077 1 TTATACT 170 1.2732926E-10 18.117224 4 TATGCGA 75 0.0012914069 17.598835 12 CCCTCGA 390 0.0 17.48827 26 GATTTCG 205 5.456968E-12 17.17033 41 AACGCAG 3105 0.0 17.146137 6 TCCTACA 565 0.0 17.132343 2 GTGTACG 90 2.2142331E-4 17.112179 1 >>END_MODULE