##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064019_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2786438 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.067374547720064 32.0 32.0 32.0 32.0 32.0 2 30.799872094767586 32.0 32.0 32.0 32.0 32.0 3 31.141085500556624 32.0 32.0 32.0 32.0 32.0 4 31.337025980840053 32.0 32.0 32.0 32.0 32.0 5 31.17514331917667 32.0 32.0 32.0 32.0 32.0 6 34.764449810116 36.0 36.0 36.0 32.0 36.0 7 34.79942564664995 36.0 36.0 36.0 32.0 36.0 8 34.70586103118031 36.0 36.0 36.0 32.0 36.0 9 34.92845776579274 36.0 36.0 36.0 32.0 36.0 10 34.63983802977134 36.0 36.0 36.0 32.0 36.0 11 34.93543549147693 36.0 36.0 36.0 36.0 36.0 12 34.787132891526745 36.0 36.0 36.0 32.0 36.0 13 34.87798544234611 36.0 36.0 36.0 32.0 36.0 14 34.79877212412406 36.0 36.0 36.0 32.0 36.0 15 34.72487060541092 36.0 36.0 36.0 32.0 36.0 16 34.768002374357515 36.0 36.0 36.0 32.0 36.0 17 34.71984447527632 36.0 36.0 36.0 32.0 36.0 18 34.73047238086762 36.0 36.0 36.0 32.0 36.0 19 34.73422843070615 36.0 36.0 36.0 32.0 36.0 20 34.73069704045093 36.0 36.0 36.0 32.0 36.0 21 34.726019742768365 36.0 36.0 36.0 32.0 36.0 22 34.70086253489222 36.0 36.0 36.0 32.0 36.0 23 34.642074576932984 36.0 36.0 36.0 32.0 36.0 24 34.61826424991333 36.0 36.0 36.0 32.0 36.0 25 34.5795348757087 36.0 36.0 36.0 32.0 36.0 26 34.50856828682354 36.0 36.0 36.0 32.0 36.0 27 34.49514290287457 36.0 36.0 36.0 32.0 36.0 28 34.46399919897733 36.0 36.0 36.0 32.0 36.0 29 34.43306364613173 36.0 36.0 36.0 32.0 36.0 30 34.410489305701404 36.0 36.0 36.0 32.0 36.0 31 34.41143675186744 36.0 36.0 36.0 32.0 36.0 32 34.36085855848937 36.0 36.0 36.0 32.0 36.0 33 34.334677821649 36.0 36.0 36.0 32.0 36.0 34 34.32688866574458 36.0 36.0 36.0 32.0 36.0 35 34.29749091851317 36.0 36.0 36.0 32.0 36.0 36 34.2485330734077 36.0 36.0 36.0 32.0 36.0 37 34.231377837942205 36.0 36.0 36.0 32.0 36.0 38 34.18739480297067 36.0 36.0 36.0 32.0 36.0 39 34.17606995023754 36.0 36.0 36.0 32.0 36.0 40 34.16757523404433 36.0 36.0 36.0 32.0 36.0 41 34.14460217668579 36.0 36.0 36.0 32.0 36.0 42 34.08200146567051 36.0 36.0 36.0 32.0 36.0 43 34.078681815278145 36.0 36.0 36.0 32.0 36.0 44 33.99747455353394 36.0 36.0 36.0 32.0 36.0 45 33.958912059051734 36.0 36.0 36.0 32.0 36.0 46 33.93493269902291 36.0 36.0 36.0 32.0 36.0 47 33.919245287352524 36.0 36.0 36.0 32.0 36.0 48 33.86711636863982 36.0 36.0 36.0 32.0 36.0 49 33.84525225395289 36.0 36.0 36.0 32.0 36.0 50 33.12341132298655 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 8.0 20 18.0 21 75.0 22 235.0 23 739.0 24 1974.0 25 4794.0 26 9987.0 27 19460.0 28 34510.0 29 56133.0 30 86772.0 31 134027.0 32 205802.0 33 347852.0 34 663612.0 35 1220438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.493780401274385 19.374160392754046 12.800504473179764 26.331554732791794 2 15.004674448442001 21.2947414698045 38.31748566711826 25.383098414635242 3 17.732354494923975 25.42477261243052 29.739394322201296 27.10347857044421 4 12.10757246348205 17.175548137083975 37.44379024403199 33.27308915540198 5 13.956240906849535 37.34516971129449 33.75754278401314 14.941046597842838 6 32.77589464674396 37.25997556016918 17.12460545464007 12.839524338446799 7 28.89615982566978 31.3271146367618 21.631216363842558 18.145509173725863 8 26.865087254767555 34.80543977651755 19.64709065839613 18.682382310318765 9 27.156840297242262 14.302827935834372 18.77036219312708 39.76996957379628 10 15.026020909319616 27.524024615159348 32.779239832716826 24.670714642804207 11 36.37130989456791 21.10917235553061 23.99927793117952 18.52023981872197 12 24.667137041205383 23.514910825026412 30.063931221002342 21.75402091276586 13 29.134145938814854 20.379819611344704 25.772566167150202 24.71346828269024 14 22.749763227414014 20.465046839521122 25.932510751215982 30.85267918184888 15 24.066718706539977 29.128296232492616 22.482732631692283 24.32225242927512 16 24.361178730708676 26.38022036153187 25.35535728448788 23.90324362327157 17 22.972554924961546 26.85112677906345 26.314563611320256 23.861754684654745 18 23.662464156644884 25.67076868968537 27.760898353807562 22.90586879986219 19 25.088545040526693 25.21960856793717 26.00613328500396 23.685713106532184 20 25.320616919529503 25.428748306521797 25.73634675255928 23.514288021389415 21 25.63581174244681 24.796819451931103 25.223457331546584 24.343911474075504 22 25.07965377970553 25.68174950492278 25.545697475698333 23.69289923967336 23 23.517967633819225 25.45047833659378 26.304582894150823 24.72697113543617 24 24.451278355717402 25.554553477189994 26.158228931561556 23.835939235531043 25 24.19760902184941 25.44370118910088 26.319708899432992 24.038980889616713 26 23.45158834779744 26.27559690674771 26.712516818760783 23.56029792669407 27 24.074203011733832 25.973243388548696 25.82634617496596 24.126207424751517 28 23.394607196601424 25.959259143615842 26.217662362458604 24.42847129732413 29 23.94813342042363 25.478506162117153 25.900487370710383 24.672873046748826 30 23.602777827623953 25.746442478511316 26.373607048647873 24.27717264521686 31 24.578080613583467 25.181937762336897 25.838374448856978 24.401607175222654 32 23.96740841017484 26.010788974731575 25.608938964521133 24.41286365057245 33 23.461078248336346 25.840692465440252 26.447260091575526 24.25096919464788 34 24.181814462425965 25.741257739883917 26.50156349872002 23.575364298970097 35 24.483485311344374 25.751480062934974 26.193560936674555 23.571473689046098 36 23.654534700428677 26.08802231531436 26.09642070626879 24.161022277988174 37 24.37115963879744 25.819321917958167 25.53949437240499 24.270024070839398 38 24.045039878086687 26.069235909874305 25.817498982500442 24.068225229538566 39 24.796965491401114 25.30429605193032 25.509151940406603 24.38958651626196 40 25.12445336879146 25.55074047556242 26.071451001925432 23.25335515372068 41 24.2261078033427 25.448522629801495 26.52117270857783 23.804196858277972 42 24.750035529766766 26.425246088495673 25.82285504285823 23.00186333887933 43 23.831183373002087 25.862795398233136 26.30587480368991 24.000146425074863 44 23.617864120596668 26.15392124352034 25.624064208738695 24.6041504271443 45 23.80422428405265 26.390631970206858 25.687936425791868 24.117207319948623 46 23.978894759829558 25.573379720264413 25.75852788724731 24.689197632658715 47 24.693035045666566 25.527734242800637 25.828948034250732 23.950282677282065 48 24.561905951360686 26.14564087987746 25.097832749782157 24.1946204189797 49 24.36705748933223 25.93881777040873 25.37088676191399 24.32323797834505 50 24.2599063165284 26.589216782634534 24.983168269927837 24.167708630909228 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 26.5 2 39.0 3 113.5 4 188.0 5 261.5 6 335.0 7 338.5 8 342.0 9 479.0 10 616.0 11 935.5 12 1255.0 13 2296.0 14 3337.0 15 4557.0 16 5777.0 17 6165.0 18 6553.0 19 6689.0 20 6825.0 21 8211.5 22 9598.0 23 11856.5 24 14115.0 25 17917.5 26 21720.0 27 28551.0 28 35382.0 29 42770.0 30 50158.0 31 58500.0 32 66842.0 33 78803.5 34 90765.0 35 105133.5 36 119502.0 37 129327.0 38 139152.0 39 142855.0 40 146558.0 41 152258.5 42 157959.0 43 158404.0 44 158849.0 45 169989.5 46 181130.0 47 189365.0 48 197600.0 49 201173.0 50 204746.0 51 198403.5 52 192061.0 53 187653.5 54 183246.0 55 180366.5 56 177487.0 57 170011.0 58 162535.0 59 146608.5 60 130682.0 61 114722.5 62 98763.0 63 84512.5 64 70262.0 65 59166.0 66 48070.0 67 40626.0 68 33182.0 69 30070.5 70 26959.0 71 20904.0 72 14849.0 73 12658.5 74 10468.0 75 8235.5 76 6003.0 77 5270.5 78 4538.0 79 3760.5 80 2983.0 81 2473.5 82 1964.0 83 1699.0 84 1434.0 85 1049.0 86 664.0 87 491.5 88 319.0 89 264.5 90 210.0 91 177.0 92 144.0 93 108.0 94 72.0 95 80.5 96 89.0 97 65.0 98 41.0 99 48.5 100 56.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.005921538537731684 2 4.6654546054855704E-4 3 2.15328674099334E-4 4 0.0 5 0.0 6 1.07664337049667E-4 7 7.177622469977799E-5 8 0.0 9 8.61314696397336E-4 10 8.97202808747225E-4 11 0.0 12 2.15328674099334E-4 13 3.5888112349888996E-4 14 3.22993011149001E-4 15 0.004055356695537457 16 6.100979099481129E-4 17 0.0 18 2.8710489879911195E-4 19 1.07664337049667E-4 20 4.6654546054855704E-4 21 0.0 22 1.4355244939955598E-4 23 3.94769235848779E-4 24 2.51216786449223E-4 25 0.0016867412804447831 26 0.004127132920237234 27 0.0048807832795849035 28 0.003409370673239455 29 0.0020815105162935617 30 0.003158153886790232 31 0.006567524560029687 32 0.0026916084262416746 33 0.0037323636843884563 34 0.0021173986286434506 35 0.0025121678644922296 36 0.00681874134647891 37 0.0028351608756412307 38 0.007034070020578244 39 0.0031940419991401212 40 0.001902069954544117 41 0.0024403916397924517 42 0.0015073007186953379 43 0.0010766433704966698 44 9.330909210971141E-4 45 8.97202808747225E-4 46 7.536503593476689E-4 47 0.001614965055745005 48 0.00179440561749445 49 2.8710489879911195E-4 50 0.0012201958198962259 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2786438.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.189073416837054 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5792469048097 42.03947506147661 2 12.79079832767672 13.862430192768608 3 4.054667135635723 6.591559652814018 4 1.823313181518215 3.952146074207092 5 0.9675655914640323 2.6215741435724906 6 0.5808388823900773 1.8885072504713687 7 0.3870150748516948 1.4680391813192823 8 0.28382285832584725 1.2304078165756702 9 0.21513896582068184 1.0492363092311394 >10 1.1717494719127262 11.464995694919283 >50 0.0788788886636867 2.9421172034210015 >100 0.05776991212475222 6.381071271603715 >500 0.006729531053841812 2.5596738622114783 >1k 0.0024652737523671434 1.9487662854082088 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.5888112349889E-5 2 0.0 0.0 0.0 0.0 3.5888112349889E-5 3 0.0 0.0 0.0 0.0 3.5888112349889E-5 4 0.0 0.0 0.0 0.0 3.5888112349889E-5 5 0.0 0.0 0.0 0.0 3.5888112349889E-5 6 0.0 0.0 0.0 0.0 3.5888112349889E-5 7 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349889E-5 8 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349889E-5 9 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349889E-5 10 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349889E-5 11 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349889E-5 12 0.0 0.0 0.0 3.5888112349889E-5 1.43552449399556E-4 13 0.0 0.0 0.0 3.5888112349889E-5 1.7944056174944498E-4 14 0.0 0.0 0.0 3.5888112349889E-5 1.7944056174944498E-4 15 0.0 0.0 0.0 3.5888112349889E-5 1.7944056174944498E-4 16 0.0 0.0 0.0 3.5888112349889E-5 2.51216786449223E-4 17 0.0 0.0 0.0 3.5888112349889E-5 2.51216786449223E-4 18 0.0 0.0 0.0 3.5888112349889E-5 2.51216786449223E-4 19 0.0 0.0 0.0 3.5888112349889E-5 2.51216786449223E-4 20 0.0 0.0 0.0 3.5888112349889E-5 2.87104898799112E-4 21 0.0 0.0 0.0 3.5888112349889E-5 3.22993011149001E-4 22 0.0 0.0 0.0 3.5888112349889E-5 3.22993011149001E-4 23 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349888996E-4 24 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349888996E-4 25 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349888996E-4 26 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349888996E-4 27 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349888996E-4 28 0.0 0.0 0.0 3.5888112349889E-5 3.5888112349888996E-4 29 0.0 0.0 0.0 1.7944056174944498E-4 3.5888112349888996E-4 30 0.0 0.0 0.0 3.22993011149001E-4 3.5888112349888996E-4 31 0.0 0.0 0.0 6.81874134647891E-4 4.3065734819866796E-4 32 0.0 0.0 0.0 0.001184307707546337 4.66545460548557E-4 33 0.0 0.0 0.0 0.00215328674099334 4.66545460548557E-4 34 0.0 0.0 0.0 0.002978713325040787 5.02433572898446E-4 35 0.0 0.0 0.0 0.0050602238413343485 5.02433572898446E-4 36 0.0 0.0 0.0 0.007644167930526357 5.02433572898446E-4 37 0.0 0.0 0.0 0.012381398760711704 5.02433572898446E-4 38 0.0 0.0 0.0 0.02113809817408462 5.02433572898446E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3665 0.0 25.390444 1 ATACCGT 630 0.0 19.903187 6 CGTCGTA 620 0.0 19.87011 10 ACCGTCG 620 0.0 19.514584 8 CCGTCGT 635 0.0 19.400736 9 ACCGTAT 115 2.0254447E-7 19.128922 8 GTCGTAG 645 0.0 19.099949 11 TACCGTC 660 0.0 18.998497 7 AACGCAG 5080 0.0 18.10093 6 TAGGACC 1935 0.0 17.621346 4 TGTAGGA 2550 0.0 17.512653 2 GTATAGG 290 0.0 17.447523 1 GTAGGAC 2445 0.0 17.364677 3 TTAGGAC 1540 0.0 17.284346 3 TCAACGC 5405 0.0 16.93113 4 TAGGACG 2205 0.0 16.860344 4 GGTATCA 1730 0.0 16.7854 1 CAACGCA 5490 0.0 16.668991 5 CTAGCGG 690 0.0 16.580183 29 ATCAACG 5590 0.0 16.41015 3 >>END_MODULE