##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064017_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 641967 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.326854807178563 32.0 32.0 32.0 32.0 32.0 2 31.369251067422468 32.0 32.0 32.0 32.0 32.0 3 31.446008906999893 32.0 32.0 32.0 32.0 32.0 4 31.527073821551575 32.0 32.0 32.0 32.0 32.0 5 31.4869066478495 32.0 32.0 32.0 32.0 32.0 6 35.057487378634725 36.0 36.0 36.0 36.0 36.0 7 35.074793564155165 36.0 36.0 36.0 36.0 36.0 8 35.02595927828066 36.0 36.0 36.0 36.0 36.0 9 35.13571102564462 36.0 36.0 36.0 36.0 36.0 10 34.986122339621815 36.0 36.0 36.0 36.0 36.0 11 35.1274582649887 36.0 36.0 36.0 36.0 36.0 12 35.034707391501435 36.0 36.0 36.0 36.0 36.0 13 35.07582321209657 36.0 36.0 36.0 36.0 36.0 14 35.01888259053814 36.0 36.0 36.0 36.0 36.0 15 34.982983548998625 36.0 36.0 36.0 36.0 36.0 16 35.012052021365584 36.0 36.0 36.0 36.0 36.0 17 34.97042527108091 36.0 36.0 36.0 36.0 36.0 18 34.96711980522363 36.0 36.0 36.0 36.0 36.0 19 34.96401061113733 36.0 36.0 36.0 36.0 36.0 20 34.96303392541984 36.0 36.0 36.0 36.0 36.0 21 34.952871409278046 36.0 36.0 36.0 36.0 36.0 22 34.94841167848192 36.0 36.0 36.0 36.0 36.0 23 34.89666291257962 36.0 36.0 36.0 32.0 36.0 24 34.87278162273139 36.0 36.0 36.0 32.0 36.0 25 34.83838110058617 36.0 36.0 36.0 32.0 36.0 26 34.78753580791536 36.0 36.0 36.0 32.0 36.0 27 34.773260930857816 36.0 36.0 36.0 32.0 36.0 28 34.75871345411836 36.0 36.0 36.0 32.0 36.0 29 34.73677307400536 36.0 36.0 36.0 32.0 36.0 30 34.72474286061433 36.0 36.0 36.0 32.0 36.0 31 34.70981530203266 36.0 36.0 36.0 32.0 36.0 32 34.6776033659051 36.0 36.0 36.0 32.0 36.0 33 34.66409176795692 36.0 36.0 36.0 32.0 36.0 34 34.64538519892767 36.0 36.0 36.0 32.0 36.0 35 34.61207351779765 36.0 36.0 36.0 32.0 36.0 36 34.609297674179516 36.0 36.0 36.0 32.0 36.0 37 34.589603515445496 36.0 36.0 36.0 32.0 36.0 38 34.55227605157275 36.0 36.0 36.0 32.0 36.0 39 34.55994311234067 36.0 36.0 36.0 32.0 36.0 40 34.536538482507666 36.0 36.0 36.0 32.0 36.0 41 34.51521028339463 36.0 36.0 36.0 32.0 36.0 42 34.46613610980004 36.0 36.0 36.0 32.0 36.0 43 34.459861643978584 36.0 36.0 36.0 32.0 36.0 44 34.40626854651407 36.0 36.0 36.0 32.0 36.0 45 34.37151598135107 36.0 36.0 36.0 32.0 36.0 46 34.35682052192714 36.0 36.0 36.0 32.0 36.0 47 34.320089661929664 36.0 36.0 36.0 32.0 36.0 48 34.29799662599479 36.0 36.0 36.0 32.0 36.0 49 34.27341592324839 36.0 36.0 36.0 32.0 36.0 50 33.68607732173149 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 3.0 21 19.0 22 52.0 23 176.0 24 479.0 25 1157.0 26 2323.0 27 4347.0 28 7351.0 29 11370.0 30 16435.0 31 23499.0 32 33528.0 33 54190.0 34 112217.0 35 374819.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.212419089754874 18.16564498414899 11.824151172663047 26.797784753433085 2 16.15375987986828 20.193562858860805 36.903741966035376 26.748935295235544 3 18.25844359358595 24.047067913253972 28.57300853939305 29.12147995376702 4 12.484909660465414 16.067648337064057 35.845767773109834 35.6016742293607 5 14.27908288120729 36.663255276361554 33.56683443229948 15.490827410131674 6 34.20659102379573 35.846246830040315 16.60482519268993 13.342336953474026 7 30.216817998432944 30.419009076790555 20.70994303445504 18.654229890321467 8 28.011875999856688 33.056060514013964 19.155813305045275 19.776250181084073 9 27.391355820785783 14.333336448801948 18.409771355758476 39.86553637465379 10 15.726115483111203 27.10681595852727 31.738072539893203 25.428996018468325 11 37.2087661826854 21.26885026800443 22.04817381578804 19.474209733522127 12 24.47913989348362 23.737045673687277 28.853196503870137 22.930617928958966 13 29.423988186290238 19.88672297286772 24.923749855911375 25.765538984930664 14 23.535047027412666 19.454924404096165 25.428605253237713 31.581423315253453 15 25.1939421507172 26.914029884226657 22.346964844285484 25.54506312077066 16 25.85947454833775 25.880503830444795 23.46914614883747 24.790875472379987 17 24.238473317164278 25.82391306718258 25.020444976143636 24.91716863950951 18 24.66034026724157 25.370969802139054 25.672854948704448 24.29583498191493 19 25.43697729010993 25.0397606107479 25.357689725484335 24.165572373657838 20 25.924391281117448 24.58521752811299 24.76747102247326 24.7229201682963 21 26.677851042187527 24.35483443853033 24.634288055305024 24.33302646397712 22 25.95499754659522 24.24462392809577 24.89092084459433 24.90945768071468 23 24.78351421196681 24.551256388647875 25.192107284110044 25.473122115275277 24 24.98426703055 24.7895520621094 25.111532733922775 25.114648173417827 25 24.9511261622627 24.63381617829176 25.177308831249345 25.237748828196192 26 24.901156831161224 25.150095182310732 25.34918355075196 24.599564435776085 27 25.150054133206634 24.849244861239843 24.78475235031584 25.21594865523768 28 24.736971645590128 24.73292146068361 25.439990279556223 25.09011661417004 29 24.715205007220153 25.126605841860698 25.315248935669743 24.842940215249403 30 24.89278743326962 24.97924289935805 25.356842989084804 24.771126678287526 31 24.900844650907743 24.862366455737615 25.002258841416868 25.234530051937774 32 24.96335401501356 24.792469230613456 24.594323883524183 25.6498528708488 33 24.607401614790145 24.706943472998297 25.10666868138972 25.578986230821837 34 25.20169047696935 24.777980805328774 25.25262910293497 24.767699614766904 35 25.51028196943994 24.540890319947533 25.274593464589866 24.674234246022657 36 24.779260108547323 24.822099537022613 25.192387978789032 25.206252375641036 37 25.43777251251279 24.824478185757926 24.81949331950033 24.918255982228953 38 24.874204332667617 24.725274725274726 25.152746318042603 25.247774624015058 39 25.319381938894885 24.83164393100322 24.7934785487185 25.05549558138339 40 25.67567146555672 24.848509394754142 24.800063555955724 24.675755583733412 41 24.703052734718803 25.079095068299818 25.371797448083882 24.846054748897497 42 25.657869116251973 25.016862447601795 24.852210187878043 24.47305824826819 43 25.213096061461393 24.410870391486128 25.180383946763367 25.195649600289112 44 24.718791328445185 24.9938859214189 24.964133335202607 25.323189414933307 45 25.00802233167902 24.96985784116718 24.97546568467096 25.046654142482843 46 24.85665017033745 24.865061896283418 24.921140069256545 25.357147864122588 47 24.86151612581626 24.836280594187727 25.284444942924083 25.017758337071932 48 25.401117833620994 25.10296655845572 24.60604776651359 24.88986784140969 49 25.009073731663662 25.10518518980066 24.63101456002916 25.25472651850652 50 25.083572445549397 25.24214979796186 24.816732558827837 24.857545197660908 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3.0 1 9.5 2 16.0 3 39.0 4 62.0 5 69.5 6 77.0 7 74.0 8 71.0 9 109.5 10 148.0 11 212.5 12 277.0 13 488.0 14 699.0 15 958.5 16 1218.0 17 1219.0 18 1220.0 19 1276.0 20 1332.0 21 1549.0 22 1766.0 23 2143.0 24 2520.0 25 3149.5 26 3779.0 27 4538.5 28 5298.0 29 6199.5 30 7101.0 31 8271.5 32 9442.0 33 10930.0 34 12418.0 35 14405.5 36 16393.0 37 19232.0 38 22071.0 39 25025.0 40 27979.0 41 31013.5 42 34048.0 43 35393.5 44 36739.0 45 39653.0 46 42567.0 47 45239.5 48 47912.0 49 49829.0 50 51746.0 51 51612.0 52 51478.0 53 50663.0 54 49848.0 55 48852.5 56 47857.0 57 45777.0 58 43697.0 59 40074.5 60 36452.0 61 31915.5 62 27379.0 63 23601.5 64 19824.0 65 16576.0 66 13328.0 67 11203.0 68 9078.0 69 7826.0 70 6574.0 71 5083.0 72 3592.0 73 2986.5 74 2381.0 75 1866.5 76 1352.0 77 1131.0 78 910.0 79 760.0 80 610.0 81 473.5 82 337.0 83 258.5 84 180.0 85 139.0 86 98.0 87 68.0 88 38.0 89 29.5 90 21.0 91 19.0 92 17.0 93 12.0 94 7.0 95 5.5 96 4.0 97 3.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008100104834049103 2 7.788562340431829E-4 3 1.557712468086366E-4 4 0.0 5 0.0 6 4.6731374042590973E-4 7 0.0 8 0.0 9 0.001401941221277729 10 4.6731374042590973E-4 11 0.0 12 0.0 13 1.557712468086366E-4 14 1.557712468086366E-4 15 0.003582738676598641 16 7.788562340431829E-4 17 0.0 18 1.557712468086366E-4 19 0.0 20 6.230849872345464E-4 21 0.0 22 3.115424936172732E-4 23 0.0012461699744690928 24 4.6731374042590973E-4 25 0.0012461699744690928 26 0.006386621119154099 27 0.004984679897876371 28 0.0032711961829813684 29 0.002180797455320912 30 0.002803882442555458 31 0.007009706106388647 32 0.002180797455320912 33 0.004050052417024551 34 0.002803882442555458 35 0.002803882442555458 36 0.00545199363830228 37 0.003738509923407278 38 0.008255876080857738 39 0.003738509923407278 40 0.0020250262085122757 41 0.002803882442555458 42 0.0012461699744690928 43 4.6731374042590973E-4 44 9.346274808518195E-4 45 0.001401941221277729 46 9.346274808518195E-4 47 0.0023365687021295488 48 0.0017134837148950024 49 6.230849872345464E-4 50 0.001401941221277729 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 641967.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.596334654799584 #Duplication Level Percentage of deduplicated Percentage of total 1 72.6303415604044 41.8324145860545 2 15.596237865988948 17.965722709707137 3 5.587263647293642 9.654177205023622 4 2.4024632336302374 5.534923056000764 5 1.2317957633723242 3.5473460506778354 6 0.68591731739225 2.3703794014827846 7 0.43409806039994525 1.7501720011856254 8 0.2857861526575181 1.3168187910536044 9 0.1931794084483327 1.0013783271665748 >10 0.8530478319055746 8.676951808846704 >50 0.06367683820255013 2.543619025981074 >100 0.03619232030425289 3.806097036819936 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 1.557712468086366E-4 0.0 18 0.0 0.0 0.0 1.557712468086366E-4 0.0 19 0.0 0.0 0.0 1.557712468086366E-4 0.0 20 0.0 0.0 0.0 1.557712468086366E-4 0.0 21 0.0 0.0 0.0 1.557712468086366E-4 0.0 22 0.0 0.0 0.0 1.557712468086366E-4 0.0 23 0.0 0.0 0.0 1.557712468086366E-4 0.0 24 0.0 0.0 0.0 1.557712468086366E-4 0.0 25 0.0 0.0 0.0 1.557712468086366E-4 0.0 26 0.0 0.0 0.0 1.557712468086366E-4 0.0 27 0.0 0.0 0.0 1.557712468086366E-4 0.0 28 0.0 0.0 0.0 9.346274808518195E-4 0.0 29 0.0 0.0 0.0 0.001869254961703639 0.0 30 0.0 0.0 0.0 0.004050052417024551 0.0 31 0.0 0.0 0.0 0.011994386004265016 0.0 32 0.0 0.0 0.0 0.020406033331931393 0.0 33 0.0 0.0 0.0 0.028661909412789132 0.0 34 0.0 0.0 0.0 0.03785241297449869 0.0 35 0.0 0.0 0.0 0.05233913892770189 0.0 36 0.0 0.0 0.0 0.07056437480431237 0.0 37 0.0 0.0 0.0 0.10327633663412605 0.0 38 0.0 0.0 0.0 0.1591982142384266 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 800 0.0 28.048609 1 ACCGTCG 155 0.0 26.966406 8 CGTCGTA 165 0.0 25.332077 10 ATACCGT 190 0.0 24.314583 6 GTCGTAG 175 0.0 23.88453 11 TACCGTC 175 0.0 23.88453 7 CCGTCGT 180 0.0 23.221071 9 ATTAGGC 50 0.002579875 21.998909 3 TCCGACC 200 0.0 21.998909 19 GGTATCA 340 0.0 21.998909 1 GACCATA 200 0.0 20.898964 22 CTTATAT 75 5.4696E-5 20.532316 3 TAACGGC 55 0.0044786073 20.002123 36 CCCGTTG 55 0.0044826474 19.999008 42 TTCCGAC 215 0.0 19.440897 18 CGATGCG 220 0.0 18.999058 44 ATAAACG 235 0.0 18.725393 26 ATAAGAC 130 3.58159E-8 18.614462 3 CGACCAT 225 0.0 18.576857 21 TAAACGA 240 0.0 18.33528 27 >>END_MODULE