##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064016_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2527289 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.151449636349465 32.0 32.0 32.0 32.0 32.0 2 30.910318131404836 32.0 32.0 32.0 32.0 32.0 3 31.18741149112745 32.0 32.0 32.0 32.0 32.0 4 31.36778500598863 32.0 32.0 32.0 32.0 32.0 5 31.20848070798393 32.0 32.0 32.0 32.0 32.0 6 34.82055752230948 36.0 36.0 36.0 32.0 36.0 7 34.85270936564833 36.0 36.0 36.0 32.0 36.0 8 34.765193850010824 36.0 36.0 36.0 32.0 36.0 9 34.98059066454213 36.0 36.0 36.0 32.0 36.0 10 34.71547733559557 36.0 36.0 36.0 32.0 36.0 11 34.97778805668841 36.0 36.0 36.0 36.0 36.0 12 34.8230590169941 36.0 36.0 36.0 32.0 36.0 13 34.91424209894476 36.0 36.0 36.0 32.0 36.0 14 34.8379227702095 36.0 36.0 36.0 32.0 36.0 15 34.77876491370793 36.0 36.0 36.0 32.0 36.0 16 34.80525456328896 36.0 36.0 36.0 32.0 36.0 17 34.75710613230224 36.0 36.0 36.0 32.0 36.0 18 34.76821883053343 36.0 36.0 36.0 32.0 36.0 19 34.76632431035786 36.0 36.0 36.0 32.0 36.0 20 34.76774559617044 36.0 36.0 36.0 32.0 36.0 21 34.76263695999943 36.0 36.0 36.0 32.0 36.0 22 34.745053691920475 36.0 36.0 36.0 32.0 36.0 23 34.68219898871874 36.0 36.0 36.0 32.0 36.0 24 34.65118591502594 36.0 36.0 36.0 32.0 36.0 25 34.61951917647725 36.0 36.0 36.0 32.0 36.0 26 34.542283846445734 36.0 36.0 36.0 32.0 36.0 27 34.54062950457981 36.0 36.0 36.0 32.0 36.0 28 34.51029977181082 36.0 36.0 36.0 32.0 36.0 29 34.481257980389266 36.0 36.0 36.0 32.0 36.0 30 34.462472238038465 36.0 36.0 36.0 32.0 36.0 31 34.465769447024066 36.0 36.0 36.0 32.0 36.0 32 34.422969039156186 36.0 36.0 36.0 32.0 36.0 33 34.394331633620055 36.0 36.0 36.0 32.0 36.0 34 34.38657153970124 36.0 36.0 36.0 32.0 36.0 35 34.35028760066617 36.0 36.0 36.0 32.0 36.0 36 34.31080893400003 36.0 36.0 36.0 32.0 36.0 37 34.31644857394623 36.0 36.0 36.0 32.0 36.0 38 34.27697109432281 36.0 36.0 36.0 32.0 36.0 39 34.27683695849584 36.0 36.0 36.0 32.0 36.0 40 34.25183150799137 36.0 36.0 36.0 32.0 36.0 41 34.23568060479035 36.0 36.0 36.0 32.0 36.0 42 34.157866393594084 36.0 36.0 36.0 32.0 36.0 43 34.16765356079182 36.0 36.0 36.0 32.0 36.0 44 34.086120740445594 36.0 36.0 36.0 32.0 36.0 45 34.0547563021087 36.0 36.0 36.0 32.0 36.0 46 34.0407472196492 36.0 36.0 36.0 32.0 36.0 47 34.03307773665774 36.0 36.0 36.0 32.0 36.0 48 33.974086461817386 36.0 36.0 36.0 32.0 36.0 49 33.95616805201146 36.0 36.0 36.0 32.0 36.0 50 33.22849701795086 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 3.0 20 17.0 21 62.0 22 227.0 23 714.0 24 1795.0 25 4393.0 26 9166.0 27 17307.0 28 30211.0 29 48915.0 30 75184.0 31 114103.0 32 176371.0 33 297050.0 34 581596.0 35 1170172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.46171184004761 18.46734980721381 12.318253907956468 26.75268444478211 2 16.204502945658156 20.11657596964957 36.239766167486856 27.43915491720542 3 17.96099525102462 23.661546277779845 29.097583886562717 29.27987458463282 4 12.467944900642546 15.94653401332416 35.66117685789001 35.924344228143276 5 14.861695674693317 36.20207265571923 33.060801514983055 15.8754301546044 6 35.24452713305894 35.70636643419067 15.76992077667506 13.279185656075331 7 30.637782476710214 30.3673740388907 20.499681872426095 18.495161611972993 8 28.40399336997075 33.137682314923225 18.626718194872055 19.831606120233975 9 27.086269646756055 13.905720894786533 18.147228106939448 40.860781351517964 10 15.707846246862228 26.566155126951113 31.500368777084542 26.225629849102116 11 37.925737816292475 20.77233747307886 21.986128218814706 19.315796491813956 12 24.457945977600467 23.408717259826258 28.542526861829987 23.590809900743288 13 29.353643490970903 19.123925621044652 25.25155562871299 26.270875259271453 14 23.572804132187912 19.199210534958322 24.76907000052626 32.45891533232751 15 25.25664092903957 27.171787878056435 21.761108972134434 25.810462220769566 16 26.079720679277358 25.793562550004474 23.08910707742809 25.03760969329008 17 24.377742315975734 25.962246502081875 24.688747507704896 24.97126367423749 18 25.244086044905895 24.884530236993456 25.450394395566782 24.420989322533863 19 25.639183187669946 24.951014684515577 25.00209710962898 24.407705018185503 20 25.917635658531317 24.15277592576692 24.58379215940597 25.345796256295795 21 26.8645968070925 24.086560737612515 24.333346918377753 24.715495536917224 22 26.016129555578594 24.011449436272745 24.791060449826414 25.181360558322247 23 24.70154518695492 23.784190590072203 25.412985648132945 26.101278574839938 24 25.11908049833774 24.8314196832803 24.778714840686554 25.270784977695403 25 25.123780740417157 24.278910167608995 25.071352232128902 25.525956859844946 26 25.07022702550411 24.968531882218823 25.236540133374962 24.724700958902105 27 25.58443948060376 24.60405236698039 24.524002192179776 25.28750596023607 28 24.842740542570354 24.358646134268337 25.487804057703546 25.310809265457763 29 24.958947342597188 24.57758299363496 25.27775337700149 25.185716286766365 30 24.82205687532348 24.74418450054843 25.405506146694464 25.028252477433632 31 25.41888575972421 24.41414558305677 24.68021911099627 25.486749546222757 32 25.274720056789924 24.498567391933157 24.325609793254138 25.90110275802278 33 24.68760819802192 24.39000551995394 25.042982437049773 25.87940384497437 34 25.537397313339877 24.215197131084782 25.159868899786208 25.087536655789133 35 25.88937576516824 24.142991790986308 25.12307980858033 24.844552635265124 36 24.888459235733563 24.815846445514882 24.7934492579052 25.502245060846352 37 25.84513259103825 24.469582428348765 24.751474651660903 24.93381032895208 38 24.99128456249691 24.29693822030964 25.14972547855765 25.562051738635798 39 25.670758851286518 24.400288860090814 24.427394224776677 25.50155806384599 40 25.666182343081534 24.528852865343797 25.051558303221384 24.75340648835328 41 24.88187617940813 24.751693658765895 25.31112237513063 25.055307786695348 42 25.95890866270346 24.853002158870044 24.72305844143511 24.465030736991384 43 25.277761620602888 24.078952002111382 25.078296350549234 25.564990026736496 44 25.087228787517873 24.525355898992665 24.63381319388334 25.753602119606118 45 25.116737144867223 24.82238662519354 24.74301209333907 25.317864136600164 46 25.01630216296465 24.544766056047788 24.912989183594007 25.525942597393552 47 25.199377818542544 24.49457648807769 25.137135931453997 25.16890976192577 48 25.98833751640618 25.04672076237838 24.20719129773125 24.757750423484193 49 25.112245136175993 24.983411025525058 24.47567168035529 25.428672157943655 50 25.173033519358544 24.961697588214253 24.56138198900309 25.30388690342411 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 31.5 2 43.0 3 130.5 4 218.0 5 283.0 6 348.0 7 323.5 8 299.0 9 396.5 10 494.0 11 779.0 12 1064.0 13 1950.0 14 2836.0 15 3613.5 16 4391.0 17 4675.5 18 4960.0 19 4948.0 20 4936.0 21 5896.0 22 6856.0 23 8198.5 24 9541.0 25 11933.5 26 14326.0 27 17692.5 28 21059.0 29 24145.0 30 27231.0 31 30825.0 32 34419.0 33 39496.0 34 44573.0 35 52673.0 36 60773.0 37 73013.5 38 85254.0 39 95327.0 40 105400.0 41 117228.5 42 129057.0 43 133330.0 44 137603.0 45 151899.5 46 166196.0 47 177886.0 48 189576.0 49 196143.0 50 202710.0 51 198929.0 52 195148.0 53 192865.5 54 190583.0 55 189470.0 56 188357.0 57 182856.0 58 177355.0 59 162020.0 60 146685.0 61 129432.0 62 112179.0 63 97275.0 64 82371.0 65 69637.5 66 56904.0 67 48497.5 68 40091.0 69 36316.5 70 32542.0 71 25013.5 72 17485.0 73 14951.0 74 12417.0 75 9827.0 76 7237.0 77 6198.5 78 5160.0 79 4322.5 80 3485.0 81 2843.5 82 2202.0 83 1797.5 84 1393.0 85 1038.5 86 684.0 87 497.0 88 310.0 89 235.5 90 161.0 91 146.5 92 132.0 93 95.5 94 59.0 95 63.0 96 67.0 97 60.0 98 53.0 99 49.5 100 46.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00542082840545739 2 3.9568090550783867E-4 3 2.7697663385548704E-4 4 0.0 5 0.0 6 1.187042716523516E-4 7 3.956809055078386E-5 8 0.0 9 0.0010683384448711643 10 6.726575393633257E-4 11 0.0 12 1.5827236220313545E-4 13 5.935213582617579E-4 14 3.165447244062709E-4 15 0.004748170866094063 16 5.935213582617579E-4 17 0.0 18 1.5827236220313545E-4 19 3.956809055078386E-5 20 2.374085433047032E-4 21 0.0 22 1.187042716523516E-4 23 8.70497992117245E-4 24 2.7697663385548704E-4 25 0.0015035874409297868 26 0.005064715590500334 27 0.004906443228297199 28 0.003798536692875251 29 0.0018597002558868416 30 0.0030467429724103574 31 0.006647439212531689 32 0.0031654472440627093 33 0.003719400511773683 34 0.0024532216141485994 35 0.002651062066902519 36 0.007359664842445798 37 0.0032445834251642767 38 0.0064891668503285534 39 0.00451076232278936 40 0.002097108799191545 41 0.002690630157453303 42 0.0016222917125821384 43 0.0012661788976250836 44 0.0010683384448711643 45 0.0011870427165235158 46 6.726575393633257E-4 47 0.0020575407086407607 48 0.0015827236220313547 49 3.165447244062709E-4 50 0.0013057469881758675 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2527289.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.13579412646868 #Duplication Level Percentage of deduplicated Percentage of total 1 78.30160708297318 40.82316466649532 2 11.982529839477364 12.494374176505195 3 3.8324200833721602 5.994187934185047 4 1.7919880599998907 3.7370688229297726 5 0.9843448933776455 2.5659801355288847 6 0.629043133018092 1.967739796782006 7 0.4410392019788349 1.6095750325249403 8 0.302433628532199 1.2614093915260507 9 0.24618983653763343 1.1551772370379532 >10 1.3317303584633893 12.429578674602716 >50 0.08276988983962547 3.000476862232249 >100 0.06138026665044377 6.724509649973935 >500 0.008705516700506252 3.158689545741185 >1k 0.0038182090791681854 3.078068073934678 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2548 0.1008194947233973 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.187042716523516E-4 2 0.0 0.0 0.0 0.0 1.187042716523516E-4 3 0.0 0.0 0.0 0.0 1.187042716523516E-4 4 0.0 0.0 0.0 0.0 1.187042716523516E-4 5 0.0 0.0 0.0 0.0 1.187042716523516E-4 6 0.0 0.0 0.0 0.0 1.5827236220313545E-4 7 0.0 0.0 0.0 0.0 1.5827236220313545E-4 8 0.0 0.0 0.0 0.0 1.5827236220313545E-4 9 0.0 0.0 0.0 0.0 1.5827236220313545E-4 10 0.0 0.0 0.0 0.0 1.5827236220313545E-4 11 0.0 0.0 0.0 0.0 1.5827236220313545E-4 12 0.0 0.0 0.0 0.0 3.956809055078386E-4 13 0.0 0.0 0.0 0.0 3.956809055078386E-4 14 0.0 0.0 0.0 0.0 3.956809055078386E-4 15 0.0 0.0 0.0 0.0 5.143851771601902E-4 16 0.0 0.0 0.0 0.0 5.143851771601902E-4 17 0.0 0.0 0.0 0.0 5.143851771601902E-4 18 0.0 0.0 0.0 0.0 5.539532677109741E-4 19 0.0 0.0 0.0 0.0 5.539532677109741E-4 20 0.0 0.0 0.0 0.0 5.93521358261758E-4 21 0.0 0.0 0.0 0.0 5.93521358261758E-4 22 0.0 0.0 0.0 0.0 5.93521358261758E-4 23 0.0 0.0 0.0 3.956809055078386E-5 5.93521358261758E-4 24 0.0 0.0 0.0 3.956809055078386E-5 5.93521358261758E-4 25 0.0 0.0 0.0 3.956809055078386E-5 5.93521358261758E-4 26 0.0 0.0 0.0 1.187042716523516E-4 6.726575393633257E-4 27 0.0 0.0 0.0 2.374085433047032E-4 6.726575393633257E-4 28 0.0 0.0 0.0 9.496341732188128E-4 7.122256299141095E-4 29 0.0 0.0 0.0 0.003165447244062709 7.122256299141095E-4 30 0.0 0.0 0.0 0.007122256299141095 7.122256299141095E-4 31 0.0 0.0 0.0 0.017647368385649603 7.122256299141095E-4 32 0.0 0.0 0.0 0.027895503838302624 7.122256299141095E-4 33 0.0 0.0 0.0 0.03940981818858073 7.122256299141095E-4 34 0.0 0.0 0.0 0.054485260688429384 7.517937204648934E-4 35 0.0 0.0 0.0 0.07292399088509466 7.517937204648934E-4 36 0.0 0.0 0.0 0.09935547537301828 7.517937204648934E-4 37 0.0 0.0 0.0 0.13666818476240747 7.517937204648934E-4 38 0.0 0.0 0.0 0.1940023479704933 7.913618110156772E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2985 0.0 26.900167 1 GGTATCA 1335 0.0 21.257633 1 AACGCAG 4580 0.0 17.194845 6 TCAACGC 4595 0.0 17.138712 4 CAACGCA 4640 0.0 17.019905 5 TATCAAC 4745 0.0 16.736332 2 CGAGCCG 790 0.0 16.707577 15 ATCAACG 4740 0.0 16.707247 3 ACCGTCG 600 0.0 16.499384 8 TAACGGC 205 1.05501385E-10 16.099508 36 AGCGAAA 840 0.0 15.974647 17 TACCGTC 690 0.0 15.941433 7 GTATAGG 320 0.0 15.81191 1 ATACCGT 710 0.0 15.80129 6 GGCGTTA 600 0.0 15.766078 42 CTAGCGG 740 0.0 15.757415 29 ATAACGC 865 0.0 15.512952 3 TCTAGCG 770 0.0 15.429522 28 TAACGCC 870 0.0 15.423797 4 TAATACT 615 0.0 15.380627 4 >>END_MODULE