FastQCFastQC Report
Thu 2 Feb 2017
SRR4064015_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064015_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2073716
Sequences flagged as poor quality0
Sequence length50
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA30150.023.494491
CGGATCG1201.4319085E-820.16792726
ATACCGT3900.018.0497976
AACGCAG40250.017.4345916
CGAGCCG6300.016.7609315
CGTCTTA2900.016.68868615
TACCGTC4000.016.4990437
TCAACGC43250.016.1740044
GGTATCA15100.016.1712461
CGTCGTA3850.016.00022910
ATTTCGT3450.015.94071942
TATCAAC45150.015.9314772
CAACGCA44150.015.8446775
ATCGTTT4450.015.82121429
ACCGTCG4050.015.75217158
GTCCTAA5900.015.6601081
ATCAACG45050.015.5273863
TAACGGC1857.557901E-915.4622936
TTAACGG1857.557901E-915.4622935
GTCGGAA4700.015.44777339
Produced by FastQC (version 0.11.5)