Basic Statistics
Measure | Value |
---|---|
Filename | SRR4064015_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2073716 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 3015 | 0.0 | 23.49449 | 1 |
CGGATCG | 120 | 1.4319085E-8 | 20.167927 | 26 |
ATACCGT | 390 | 0.0 | 18.049797 | 6 |
AACGCAG | 4025 | 0.0 | 17.434591 | 6 |
CGAGCCG | 630 | 0.0 | 16.76093 | 15 |
CGTCTTA | 290 | 0.0 | 16.688686 | 15 |
TACCGTC | 400 | 0.0 | 16.499043 | 7 |
TCAACGC | 4325 | 0.0 | 16.174004 | 4 |
GGTATCA | 1510 | 0.0 | 16.171246 | 1 |
CGTCGTA | 385 | 0.0 | 16.000229 | 10 |
ATTTCGT | 345 | 0.0 | 15.940719 | 42 |
TATCAAC | 4515 | 0.0 | 15.931477 | 2 |
CAACGCA | 4415 | 0.0 | 15.844677 | 5 |
ATCGTTT | 445 | 0.0 | 15.821214 | 29 |
ACCGTCG | 405 | 0.0 | 15.7521715 | 8 |
GTCCTAA | 590 | 0.0 | 15.660108 | 1 |
ATCAACG | 4505 | 0.0 | 15.527386 | 3 |
TAACGGC | 185 | 7.557901E-9 | 15.46229 | 36 |
TTAACGG | 185 | 7.557901E-9 | 15.46229 | 35 |
GTCGGAA | 470 | 0.0 | 15.447773 | 39 |