##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064015_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2073716 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.325958327948474 32.0 32.0 32.0 32.0 32.0 2 31.375239425263633 32.0 32.0 32.0 32.0 32.0 3 31.463310308644 32.0 32.0 32.0 32.0 32.0 4 31.545945539312036 32.0 32.0 32.0 32.0 32.0 5 31.49415541954636 32.0 32.0 32.0 32.0 32.0 6 35.06890914667196 36.0 36.0 36.0 36.0 36.0 7 35.0943861165174 36.0 36.0 36.0 36.0 36.0 8 35.03568858995156 36.0 36.0 36.0 36.0 36.0 9 35.157051881742724 36.0 36.0 36.0 36.0 36.0 10 35.001904310908536 36.0 36.0 36.0 36.0 36.0 11 35.15245771359241 36.0 36.0 36.0 36.0 36.0 12 35.05821867603857 36.0 36.0 36.0 36.0 36.0 13 35.10869665855884 36.0 36.0 36.0 36.0 36.0 14 35.05101180682408 36.0 36.0 36.0 36.0 36.0 15 35.02334553043907 36.0 36.0 36.0 36.0 36.0 16 35.033416822747185 36.0 36.0 36.0 36.0 36.0 17 35.000963487767855 36.0 36.0 36.0 36.0 36.0 18 35.004191027122324 36.0 36.0 36.0 36.0 36.0 19 34.991174779960225 36.0 36.0 36.0 36.0 36.0 20 34.98665294572642 36.0 36.0 36.0 36.0 36.0 21 34.98960658065039 36.0 36.0 36.0 36.0 36.0 22 34.96752641152405 36.0 36.0 36.0 36.0 36.0 23 34.91799793221444 36.0 36.0 36.0 32.0 36.0 24 34.89378053696842 36.0 36.0 36.0 32.0 36.0 25 34.86873901730034 36.0 36.0 36.0 32.0 36.0 26 34.810166869523115 36.0 36.0 36.0 32.0 36.0 27 34.799944158216455 36.0 36.0 36.0 32.0 36.0 28 34.77179758462586 36.0 36.0 36.0 32.0 36.0 29 34.74945604894788 36.0 36.0 36.0 32.0 36.0 30 34.733896541281446 36.0 36.0 36.0 32.0 36.0 31 34.722594125714416 36.0 36.0 36.0 32.0 36.0 32 34.6858745363396 36.0 36.0 36.0 32.0 36.0 33 34.66351226493888 36.0 36.0 36.0 32.0 36.0 34 34.65687442253423 36.0 36.0 36.0 32.0 36.0 35 34.62481265515625 36.0 36.0 36.0 32.0 36.0 36 34.5980519994059 36.0 36.0 36.0 32.0 36.0 37 34.58571135102396 36.0 36.0 36.0 32.0 36.0 38 34.549270006114625 36.0 36.0 36.0 32.0 36.0 39 34.53436150369674 36.0 36.0 36.0 32.0 36.0 40 34.522834852988545 36.0 36.0 36.0 32.0 36.0 41 34.50247574884892 36.0 36.0 36.0 32.0 36.0 42 34.45134386772345 36.0 36.0 36.0 32.0 36.0 43 34.450783520983585 36.0 36.0 36.0 32.0 36.0 44 34.3840545185551 36.0 36.0 36.0 32.0 36.0 45 34.35205351166698 36.0 36.0 36.0 32.0 36.0 46 34.32650324345282 36.0 36.0 36.0 32.0 36.0 47 34.30296289366529 36.0 36.0 36.0 32.0 36.0 48 34.25454883889597 36.0 36.0 36.0 32.0 36.0 49 34.2342596575423 36.0 36.0 36.0 32.0 36.0 50 33.6370959186311 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 6.0 19 5.0 20 11.0 21 60.0 22 183.0 23 573.0 24 1492.0 25 3645.0 26 7370.0 27 13465.0 28 22854.0 29 35742.0 30 51792.0 31 74851.0 32 109482.0 33 177526.0 34 368508.0 35 1206148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.17250598979131 18.354321716417623 12.058916011744234 26.414256282046832 2 15.489578069001169 20.609016523091046 37.70340415025481 26.198001257652976 3 17.792853288479723 24.96034882425644 29.197635733846937 28.049162153416894 4 12.0972688642032 16.51971629673494 36.621697474485416 34.76131736457644 5 13.894911357196454 37.35328270602146 33.89851840849952 14.85328752828256 6 33.56216602779652 36.403735714633605 17.015180017678436 13.018918239891441 7 29.424969197792368 30.916205939581857 21.39618992966729 18.262634932958484 8 27.588892398425045 33.89043335270276 19.481992462802268 19.038681786069926 9 27.447136734887756 13.972133853563125 18.529352620606947 40.05137679094218 10 15.35171982778575 27.339349644306594 32.40503911855932 24.903891409348333 11 36.75061423580386 21.15126717027171 23.201645356280878 18.89647323764355 12 24.71634158891146 23.61107561379152 29.55188023006121 22.12070256723581 13 29.554478793040097 19.925534284995074 25.371822235167375 25.148164686797454 14 23.29709713368655 19.945614355726864 25.614972978368712 31.142315532217875 15 24.701065530486613 27.88632412477726 22.404737620050007 25.007872724686113 16 25.08363058740813 25.982650360249277 24.430547672448753 24.503171379893843 17 23.68569273709611 26.287833049462893 25.62544726471706 24.401026948723935 18 24.307098350924214 25.38724130265269 26.744665471062206 23.560994875360887 19 25.54174512891116 25.03564858237511 25.60737613413608 23.815230154577655 20 25.723091226748696 24.764418785543334 25.31801836426756 24.194471623440407 21 26.289810176514045 24.489804775581614 24.791774765686334 24.428610282218006 22 25.571305603711213 24.85953952206547 25.153504700501273 24.41565017372204 23 24.276653858617657 24.790808295912225 25.788881301791584 25.14365654367853 24 24.83162994175645 25.19392816532334 25.55468325789673 24.41975863502348 25 24.693045844563365 24.919261930837 25.726763181029288 24.660929043570345 26 24.307401175634872 25.539170226894925 26.025666436632278 24.127762160837925 27 24.815029509436364 25.350964084233308 25.227602197944226 24.606404208386103 28 24.270444270299596 25.14943637350051 25.82872988124661 24.751389474953285 29 24.511467175397293 25.180671065334785 25.505700554286193 24.80216120498173 30 24.360626976904783 25.259484199952453 25.853996343615286 24.525892479527478 31 24.995370272131545 24.92659952275222 25.21566815653882 24.86236204857742 32 24.587044384078503 25.27346720684166 25.0906011576694 25.048887251410434 33 24.248423158293736 25.139575628361595 25.63928458960642 24.97271662373825 34 24.832891520423136 25.067839219001442 25.80103807146133 24.298231189114087 35 25.196923679355105 25.021773243842006 25.616136987701854 24.165166089101035 36 24.402651122212916 25.43938207999182 25.447146590584108 24.710820207211157 37 25.029561772047394 25.203653121298753 25.151666840275766 24.61511826637809 38 24.619312474108426 25.36142105981478 25.43491816695128 24.584348299125512 39 25.159552356417347 24.964434075001424 24.98058944432281 24.89542412425842 40 25.440984000254623 25.099992380614356 25.461430959203497 23.99759265992753 41 24.556168217718934 25.254937438694935 25.820607760437415 24.368286583148716 42 25.316793261804786 25.679772731547096 25.225071865305537 23.778362141342576 43 24.62706576199914 25.0261610944741 25.609372664187998 24.737400479338763 44 24.379654759355812 25.452045731172156 25.244733527384117 24.92356598208792 45 24.48979690251745 25.55649751842615 25.33954064360819 24.614164935448215 46 24.518840114250608 25.122450977413656 25.32146847619723 25.037240432138503 47 24.947243344174005 25.088393921507357 25.506155264670593 24.458207469648045 48 25.230691033876802 25.64073877070553 24.70606333436372 24.422506861053954 49 24.727697789514142 25.531282866865958 24.940649763925183 24.80036957969472 50 24.58377316945791 25.943041603634875 24.82696296310585 24.64622226380137 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 14.0 1 22.5 2 31.0 3 106.0 4 181.0 5 224.0 6 267.0 7 280.5 8 294.0 9 386.0 10 478.0 11 718.0 12 958.0 13 1763.0 14 2568.0 15 3510.5 16 4453.0 17 4847.0 18 5241.0 19 5324.5 20 5408.0 21 6334.0 22 7260.0 23 8414.0 24 9568.0 25 12021.0 26 14474.0 27 18258.5 28 22043.0 29 26010.0 30 29977.0 31 34446.5 32 38916.0 33 45450.5 34 51985.0 35 60005.0 36 68025.0 37 77360.0 38 86695.0 39 92053.0 40 97411.0 41 104194.0 42 110977.0 43 112256.0 44 113535.0 45 123792.0 46 134049.0 47 142032.5 48 150016.0 49 154922.0 50 159828.0 51 157267.5 52 154707.0 53 152118.5 54 149530.0 55 147705.0 56 145880.0 57 141524.5 58 137169.0 59 123977.5 60 110786.0 61 95989.0 62 81192.0 63 69963.0 64 58734.0 65 49277.5 66 39821.0 67 33637.0 68 27453.0 69 24110.0 70 20767.0 71 16112.0 72 11457.0 73 9753.0 74 8049.0 75 6322.5 76 4596.0 77 4025.0 78 3454.0 79 2860.0 80 2266.0 81 1845.0 82 1424.0 83 1173.0 84 922.0 85 666.5 86 411.0 87 287.5 88 164.0 89 134.5 90 105.0 91 82.0 92 59.0 93 54.0 94 49.0 95 40.5 96 32.0 97 26.5 98 21.0 99 18.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009065850868682116 2 5.786713320435392E-4 3 3.375582770253979E-4 4 0.0 5 0.0 6 1.446678330108848E-4 7 4.8222611003628274E-5 8 4.8222611003628274E-5 9 8.197843870616805E-4 10 9.644522200725654E-4 11 4.8222611003628274E-5 12 3.375582770253979E-4 13 4.822261100362827E-4 14 3.375582770253979E-4 15 0.004870483711366455 16 6.268939430471675E-4 17 0.0 18 4.340034990326544E-4 19 4.8222611003628274E-5 20 7.23339165054424E-4 21 0.0 22 4.8222611003628274E-5 23 9.644522200725654E-4 24 4.822261100362827E-4 25 0.0016877913851269892 26 0.005449155043409994 27 0.006847610762515215 28 0.004388257601330173 29 0.0027969114382104397 30 0.004002476713301146 31 0.007715617760580523 32 0.003230914937243094 33 0.005256264599395481 34 0.0030380244932285807 35 0.0033755827702539785 36 0.00863184736964946 37 0.004436480212333801 38 0.007956730815598664 39 0.004918706322370083 40 0.0027969114382104397 41 0.0033755827702539785 42 0.002170017495163272 43 0.001253787886094335 44 0.0015431235521161048 45 0.0015431235521161048 46 0.0013984557191052199 47 0.002121794884159644 48 0.002652243605199555 49 4.340034990326544E-4 50 0.0013020104970979632 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2073716.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.77292916742883 #Duplication Level Percentage of deduplicated Percentage of total 1 76.24142740123544 41.75966302671536 2 13.660656813160085 14.964683760155426 3 4.439334230263598 7.294660180343107 4 1.8851437004322142 4.130193694967933 5 1.0239319993495997 2.80418774363197 6 0.6172552465251935 2.0285326737688942 7 0.40078111457830456 1.5366368920308455 8 0.28486562055907555 1.2482339565694323 9 0.20633715687527954 1.0171521430324504 >10 1.0974541156785418 10.622862708369055 >50 0.07952659409283161 3.015763337574974 >100 0.05593127967392603 6.285159538474463 >500 0.005582504063541427 2.0466697352553513 >1k 0.0017722235122353683 1.2456006091107976 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 4.822261100362827E-5 6 0.0 0.0 0.0 0.0 4.822261100362827E-5 7 0.0 0.0 0.0 0.0 4.822261100362827E-5 8 0.0 0.0 0.0 0.0 4.822261100362827E-5 9 0.0 0.0 0.0 0.0 4.822261100362827E-5 10 0.0 0.0 0.0 0.0 4.822261100362827E-5 11 0.0 0.0 0.0 0.0 4.822261100362827E-5 12 0.0 0.0 0.0 0.0 2.4111305501814135E-4 13 0.0 0.0 0.0 0.0 2.4111305501814135E-4 14 0.0 0.0 0.0 0.0 2.4111305501814135E-4 15 0.0 0.0 0.0 0.0 2.8933566602176963E-4 16 0.0 0.0 0.0 0.0 2.8933566602176963E-4 17 0.0 0.0 0.0 4.822261100362827E-5 2.8933566602176963E-4 18 0.0 0.0 0.0 4.822261100362827E-5 3.375582770253979E-4 19 0.0 0.0 0.0 4.822261100362827E-5 3.375582770253979E-4 20 0.0 0.0 0.0 4.822261100362827E-5 5.304487210399109E-4 21 0.0 0.0 0.0 4.822261100362827E-5 6.268939430471675E-4 22 0.0 0.0 0.0 9.644522200725653E-5 6.268939430471675E-4 23 0.0 0.0 0.0 9.644522200725653E-5 6.268939430471675E-4 24 0.0 0.0 0.0 1.9289044401451307E-4 6.268939430471675E-4 25 0.0 0.0 0.0 2.8933566602176963E-4 6.268939430471675E-4 26 0.0 0.0 0.0 2.8933566602176963E-4 6.268939430471675E-4 27 0.0 0.0 0.0 5.786713320435393E-4 6.751165540507958E-4 28 0.0 0.0 0.0 0.0016395687741233612 6.751165540507958E-4 29 0.0 0.0 0.0 0.0038578088802902616 6.751165540507958E-4 30 0.0 0.0 0.0 0.007474504705562382 6.751165540507958E-4 31 0.0 0.0 0.0 0.01533479029915379 6.751165540507958E-4 32 0.0 0.0 0.0 0.024063082890810505 6.751165540507958E-4 33 0.0 0.0 0.0 0.03438272164558696 6.751165540507958E-4 34 0.0 0.0 0.0 0.04450946995634889 9.162296090689371E-4 35 0.0 0.0 0.0 0.05777068798234666 9.162296090689371E-4 36 0.0 0.0 0.0 0.07797596199286691 9.162296090689371E-4 37 0.0 0.0 0.0 0.10816331648113821 9.162296090689371E-4 38 0.0 0.0 0.0 0.15141899855139276 9.644522200725654E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3015 0.0 23.49449 1 CGGATCG 120 1.4319085E-8 20.167927 26 ATACCGT 390 0.0 18.049797 6 AACGCAG 4025 0.0 17.434591 6 CGAGCCG 630 0.0 16.76093 15 CGTCTTA 290 0.0 16.688686 15 TACCGTC 400 0.0 16.499043 7 TCAACGC 4325 0.0 16.174004 4 GGTATCA 1510 0.0 16.171246 1 CGTCGTA 385 0.0 16.000229 10 ATTTCGT 345 0.0 15.940719 42 TATCAAC 4515 0.0 15.931477 2 CAACGCA 4415 0.0 15.844677 5 ATCGTTT 445 0.0 15.821214 29 ACCGTCG 405 0.0 15.7521715 8 GTCCTAA 590 0.0 15.660108 1 ATCAACG 4505 0.0 15.527386 3 TAACGGC 185 7.557901E-9 15.46229 36 TTAACGG 185 7.557901E-9 15.46229 35 GTCGGAA 470 0.0 15.447773 39 >>END_MODULE