##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064014_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1308140 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.282818352775696 32.0 32.0 32.0 32.0 32.0 2 31.381865855336585 32.0 32.0 32.0 32.0 32.0 3 31.459153454523218 32.0 32.0 32.0 32.0 32.0 4 31.536236947115754 32.0 32.0 32.0 32.0 32.0 5 31.492022260614306 32.0 32.0 32.0 32.0 32.0 6 35.06068922286605 36.0 36.0 36.0 36.0 36.0 7 35.076966532634124 36.0 36.0 36.0 36.0 36.0 8 35.02891586527436 36.0 36.0 36.0 36.0 36.0 9 35.14199932728913 36.0 36.0 36.0 36.0 36.0 10 34.98917852829208 36.0 36.0 36.0 36.0 36.0 11 35.144073264329506 36.0 36.0 36.0 36.0 36.0 12 35.038871221734674 36.0 36.0 36.0 36.0 36.0 13 35.078200345528764 36.0 36.0 36.0 36.0 36.0 14 35.031836806458024 36.0 36.0 36.0 36.0 36.0 15 35.00693733086673 36.0 36.0 36.0 36.0 36.0 16 35.01507407464033 36.0 36.0 36.0 36.0 36.0 17 34.974914764474754 36.0 36.0 36.0 36.0 36.0 18 34.9680982157873 36.0 36.0 36.0 36.0 36.0 19 34.96366520403015 36.0 36.0 36.0 36.0 36.0 20 34.966256669775404 36.0 36.0 36.0 36.0 36.0 21 34.95140504838932 36.0 36.0 36.0 36.0 36.0 22 34.935485498494046 36.0 36.0 36.0 36.0 36.0 23 34.88961196813797 36.0 36.0 36.0 32.0 36.0 24 34.863539070741666 36.0 36.0 36.0 32.0 36.0 25 34.838094546455274 36.0 36.0 36.0 32.0 36.0 26 34.77562646199948 36.0 36.0 36.0 32.0 36.0 27 34.76915926429893 36.0 36.0 36.0 32.0 36.0 28 34.73635620040668 36.0 36.0 36.0 32.0 36.0 29 34.712165364563425 36.0 36.0 36.0 32.0 36.0 30 34.67821410552387 36.0 36.0 36.0 32.0 36.0 31 34.67018591282279 36.0 36.0 36.0 32.0 36.0 32 34.62164523674836 36.0 36.0 36.0 32.0 36.0 33 34.60887596128855 36.0 36.0 36.0 32.0 36.0 34 34.59633372574801 36.0 36.0 36.0 32.0 36.0 35 34.544567859709204 36.0 36.0 36.0 32.0 36.0 36 34.510327640772395 36.0 36.0 36.0 32.0 36.0 37 34.497946702952284 36.0 36.0 36.0 32.0 36.0 38 34.453182381090706 36.0 36.0 36.0 32.0 36.0 39 34.430083171525986 36.0 36.0 36.0 32.0 36.0 40 34.418991086580945 36.0 36.0 36.0 32.0 36.0 41 34.38993838579969 36.0 36.0 36.0 32.0 36.0 42 34.32724326142462 36.0 36.0 36.0 32.0 36.0 43 34.325468986499914 36.0 36.0 36.0 32.0 36.0 44 34.23870763068173 36.0 36.0 36.0 32.0 36.0 45 34.21224486675738 36.0 36.0 36.0 32.0 36.0 46 34.15178803491981 36.0 36.0 36.0 32.0 36.0 47 34.118777042212606 36.0 36.0 36.0 32.0 36.0 48 34.065252190132554 36.0 36.0 36.0 32.0 36.0 49 34.03798523093858 36.0 36.0 36.0 32.0 36.0 50 33.444535753053955 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 0.0 19 4.0 20 9.0 21 33.0 22 163.0 23 401.0 24 1082.0 25 2582.0 26 5225.0 27 9499.0 28 16256.0 29 24690.0 30 35291.0 31 50053.0 32 71569.0 33 114291.0 34 231441.0 35 745549.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.753780523233594 18.74841363281907 12.361584685249461 26.136221158697882 2 14.917015572527953 21.170259689925444 38.618049944310116 25.29467479323649 3 17.61882374525565 25.493699044823355 29.724225710649133 27.163251499271862 4 11.675661626431422 16.791551363003958 37.454706682770954 34.078080327793664 5 13.25370373201645 38.063892243949425 34.10300120782179 14.579402816212331 6 32.334738383870814 37.47632130555033 17.350310135475002 12.838630175103848 7 28.683845805141207 31.36720389378177 21.75146792728896 18.197482373788066 8 26.901554879447154 34.42926598070543 19.979742229424986 18.689436910422433 9 27.409536550406116 13.91105590062112 19.070654562828476 39.60875298614429 10 15.22618581667849 27.484389906798114 32.74060336603146 24.54882091049194 11 36.40948216551745 21.23572400507591 23.807849312764688 18.54694451664195 12 24.464162037950125 24.04142376415944 30.193909205297913 21.300504992592526 13 29.353446430646358 20.371735048955156 25.744800234837967 24.530018285560523 14 22.805350514013835 20.591436975971916 26.292908382614648 30.310304127399597 15 24.107019995535484 29.079070891038246 22.883329307112955 23.930579806313318 16 24.24879235731699 26.256930710856057 25.719597562010417 23.77467936981654 17 22.76959864356922 26.84462430980194 26.466453488505426 23.91932355812341 18 23.360685187648397 25.584991797501488 28.27530428746814 22.779018727381974 19 25.177886158973813 25.09081596770988 26.317290198296817 23.414007675019494 20 25.391015585583105 25.008179602670065 26.121217124877305 23.47958768686952 21 25.89776323635085 24.66387389728928 25.363110982004983 24.075251884354888 22 25.156730286307493 25.504934873128924 25.90588614818456 23.432448692379023 23 23.402432023141447 25.333892911173134 26.691480733169282 24.572194332516137 24 24.297244323220216 25.44964743726952 26.60831901270204 23.64478922680822 25 24.001715440261933 25.356179369002362 26.72241592699135 23.919689263744353 26 23.224313997703515 26.376247433272738 27.176500627634574 23.222937941389173 27 24.057201656787 25.899299275117464 26.230167406431132 23.813331661664403 28 23.187418631549896 25.94486783432065 26.697643057489035 24.170070476640422 29 23.659653256255382 25.362029121337375 26.38181869609124 24.596498926316 30 23.25419789847068 25.889709845232957 26.77534888521094 24.080743371085433 31 24.352949540958267 25.376304134930518 25.923606954163102 24.347139369948113 32 23.667987670629678 26.205492563236948 25.847414868633496 24.279104897499877 33 23.28097419043622 25.686788509274272 26.798493365472016 24.233743934817493 34 24.154200863534623 25.799319935907626 26.6955734677153 23.35090573284245 35 24.38724197348525 25.793630771912284 26.56321907618825 23.255908178414224 36 23.348518752680512 26.24366138069329 26.47453887571834 23.93328099090786 37 24.175382293739503 26.009658349457336 25.781463216244127 24.03349614055903 38 23.731861205973217 26.145780057016648 26.129725489836314 23.99263324717382 39 24.560195095101218 25.395847348786006 25.8189101584001 24.22504739771268 40 24.955661424521985 25.72623528800198 26.337878292139226 22.980224995336805 41 23.934503428257344 25.68291849470109 26.906449741189313 23.476128335852255 42 24.640511883557192 26.575746687969666 26.162020013607417 22.62172141486572 43 23.489547579041034 25.978390328701234 26.581164696151266 23.95089739610647 44 23.204846042294317 26.361745376376312 25.899555009903537 24.53385357142584 45 23.422820125890016 26.64292277655211 25.966305998046057 23.96795109951182 46 23.53750597228858 25.76428093645485 25.885064500716677 24.813148590539893 47 24.250272721921494 25.737610550802724 26.130009043588874 23.88210768368691 48 24.24360567962731 26.21078896793399 25.346414762016156 24.199190590422546 49 23.89143619843227 26.342102567473972 25.636135136002885 24.13032609809087 50 23.79567992025221 26.99201298959426 25.266870724793673 23.94543636535986 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 143.0 1 94.0 2 45.0 3 125.0 4 205.0 5 250.0 6 295.0 7 280.0 8 265.0 9 386.5 10 508.0 11 768.5 12 1029.0 13 1792.5 14 2556.0 15 3443.5 16 4331.0 17 4745.0 18 5159.0 19 5258.5 20 5358.0 21 5924.5 22 6491.0 23 7622.5 24 8754.0 25 10160.0 26 11566.0 27 14491.5 28 17417.0 29 20869.0 30 24321.0 31 28231.5 32 32142.0 33 38064.0 34 43986.0 35 50492.0 36 56998.0 37 61078.0 38 65158.0 39 67377.0 40 69596.0 41 71294.5 42 72993.0 43 72688.5 44 72384.0 45 77239.0 46 82094.0 47 85722.5 48 89351.0 49 91196.5 50 93042.0 51 89541.5 52 86041.0 53 83928.0 54 81815.0 55 80900.0 56 79985.0 57 77677.5 58 75370.0 59 68105.5 60 60841.0 61 53581.0 62 46321.0 63 40185.5 64 34050.0 65 28826.0 66 23602.0 67 20510.5 68 17419.0 69 15805.0 70 14191.0 71 10986.0 72 7781.0 73 6626.0 74 5471.0 75 4333.5 76 3196.0 77 2767.5 78 2339.0 79 1935.5 80 1532.0 81 1216.5 82 901.0 83 743.0 84 585.0 85 420.5 86 256.0 87 176.0 88 96.0 89 74.0 90 52.0 91 47.0 92 42.0 93 30.0 94 18.0 95 23.0 96 28.0 97 19.0 98 10.0 99 10.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009173330071704863 2 2.293332517926216E-4 3 3.822220863210359E-4 4 0.0 5 0.0 6 1.528888345284144E-4 7 2.293332517926216E-4 8 0.0 9 0.0011466662589631079 10 9.173330071704864E-4 11 0.0 12 1.528888345284144E-4 13 3.057776690568288E-4 14 3.057776690568288E-4 15 0.0036693320286819457 16 9.937774244346935E-4 17 7.64444172642072E-5 18 1.528888345284144E-4 19 0.0 20 6.115553381136576E-4 21 0.0 22 7.64444172642072E-5 23 8.408885899062792E-4 24 3.057776690568288E-4 25 0.0016053327625483512 26 0.004127998532267189 27 0.005045331539437674 28 0.003592887611417738 29 0.0020639992661335943 30 0.003439998776889324 31 0.00680355313651444 32 0.003363554359625117 33 0.004510220618588225 34 0.0021404436833978016 35 0.0029048878560398736 36 0.006650664301986026 37 0.0037457764459461525 38 0.007720886143684927 39 0.0045866650358524315 40 0.0018346660143409728 41 0.003134221107832495 42 0.0022933325179262157 43 0.0016817771798125585 44 0.0016053327625483512 45 0.0010702218416989008 46 0.0011466662589631079 47 0.002369776935190423 48 0.001987554848869387 49 4.586665035852432E-4 50 0.0012231106762273152 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1308140.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.01214648647863 #Duplication Level Percentage of deduplicated Percentage of total 1 76.38834769290061 42.7867532083481 2 14.031335978361428 15.718504924419566 3 4.489427038402603 7.543873347460936 4 1.880279761547797 4.212740217575052 5 0.9373158443081206 2.625053618774192 6 0.5434434738844567 1.826366127980221 7 0.3362947882061165 1.318561505774821 8 0.23252294994065936 1.041928762683548 9 0.1672732794248675 0.8432401887377414 >10 0.8509077864008622 8.477820702298322 >50 0.06791218691201319 2.6577558323885597 >100 0.06697866618448642 7.6220019208116785 >500 0.0067252952202882105 2.5588572015175823 >1k 0.0012352583057672222 0.7665424412297375 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1345 0.10281774122035867 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2933325179262158E-4 2 0.0 0.0 0.0 0.0 2.2933325179262158E-4 3 0.0 0.0 0.0 0.0 2.2933325179262158E-4 4 0.0 0.0 0.0 0.0 2.2933325179262158E-4 5 0.0 0.0 0.0 0.0 3.057776690568288E-4 6 0.0 0.0 0.0 0.0 4.5866650358524316E-4 7 0.0 0.0 0.0 0.0 4.5866650358524316E-4 8 0.0 0.0 0.0 0.0 4.5866650358524316E-4 9 0.0 0.0 0.0 0.0 5.351109208494504E-4 10 0.0 0.0 0.0 0.0 6.879997553778648E-4 11 0.0 0.0 0.0 0.0 6.879997553778648E-4 12 0.0 0.0 0.0 0.0 9.937774244346935E-4 13 0.0 0.0 0.0 0.0 9.937774244346935E-4 14 0.0 0.0 0.0 0.0 9.937774244346935E-4 15 0.0 0.0 0.0 0.0 0.0010702218416989008 16 0.0 0.0 0.0 1.528888345284144E-4 0.0010702218416989008 17 0.0 0.0 0.0 1.528888345284144E-4 0.0010702218416989008 18 0.0 0.0 0.0 3.057776690568288E-4 0.0012231106762273152 19 0.0 0.0 0.0 3.057776690568288E-4 0.0012231106762273152 20 0.0 0.0 0.0 3.057776690568288E-4 0.0012995550934915222 21 0.0 0.0 0.0 3.057776690568288E-4 0.0012995550934915222 22 0.0 0.0 0.0 5.351109208494504E-4 0.0012995550934915222 23 0.0 0.0 0.0 0.0010702218416989008 0.0014524439280199366 24 0.0 0.0 0.0 0.0018346660143409726 0.0017582215970767655 25 0.0 0.0 0.0 0.0020639992661335943 0.0017582215970767655 26 0.0 0.0 0.0 0.0026755546042472518 0.0018346660143409726 27 0.0 0.0 0.0 0.0036693320286819452 0.0018346660143409726 28 0.0 0.0 0.0 0.0065742198847218184 0.0018346660143409726 29 0.0 0.0 0.0 0.011390218172366871 0.0018346660143409726 30 0.0 0.0 0.0 0.025532435366245203 0.0018346660143409726 31 0.0 0.0 0.0 0.050759093063433576 0.0018346660143409726 32 0.0 0.0 0.0 0.07812619444401975 0.0018346660143409726 33 0.0 0.0 0.0 0.10274129680309448 0.00191111043160518 34 0.0 0.0 0.0 0.13324261929151315 0.001987554848869387 35 0.0 0.0 0.0 0.16382038619719602 0.001987554848869387 36 0.0 0.0 0.0 0.20968703655572032 0.0020639992661335943 37 0.0 0.0 0.0 0.27886923417982784 0.0020639992661335943 38 0.0 0.0 0.0 0.37641231060895625 0.0021404436833978016 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTACG 25 0.0023532247 35.1989 44 CGATTAA 45 0.0013975956 24.446484 33 TTAGGAC 660 0.0 21.999313 3 ATTGTCG 80 3.6169004E-6 21.999313 43 TAGGACG 960 0.0 20.394415 4 GTCGTAA 100 1.1226821E-6 19.801651 30 AATCCCG 345 0.0 19.766743 19 GACGTGA 610 0.0 19.474056 7 GTATCAA 3070 0.0 19.350147 1 CGTCGTA 290 0.0 18.965649 10 GTCCTAC 905 0.0 18.962906 1 TAACGGC 105 1.7921429E-6 18.857994 36 GGACGTG 1010 0.0 18.731373 6 AGGACGT 1020 0.0 18.547731 5 GATATAC 465 0.0 18.453152 1 TTTAGGA 755 0.0 18.357042 2 ATTGCCG 60 0.0074104886 18.334162 28 GTGCGAA 60 0.0074121226 18.333462 11 ATCCCGT 360 0.0 18.33276 20 ATACCGT 340 0.0 18.116386 6 >>END_MODULE