##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064012_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2269470 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.221738115066515 32.0 32.0 32.0 32.0 32.0 2 30.75540765024433 32.0 32.0 32.0 32.0 32.0 3 30.783175807567407 32.0 32.0 32.0 32.0 32.0 4 30.82699617091215 32.0 32.0 32.0 32.0 32.0 5 30.69203602603251 32.0 32.0 32.0 32.0 32.0 6 34.3645428227736 36.0 36.0 36.0 32.0 36.0 7 34.28564202214614 36.0 36.0 36.0 32.0 36.0 8 34.23303282264141 36.0 36.0 36.0 32.0 36.0 9 34.414938289556595 36.0 36.0 36.0 32.0 36.0 10 34.03794938906441 36.0 36.0 36.0 32.0 36.0 11 34.39528127712638 36.0 36.0 36.0 32.0 36.0 12 34.15390245299563 36.0 36.0 36.0 32.0 36.0 13 34.281505373501304 36.0 36.0 36.0 32.0 36.0 14 34.15450171185343 36.0 36.0 36.0 32.0 36.0 15 34.07580977056317 36.0 36.0 36.0 32.0 36.0 16 34.07163302445064 36.0 36.0 36.0 32.0 36.0 17 33.975462552930864 36.0 36.0 36.0 32.0 36.0 18 33.98188651976012 36.0 36.0 36.0 32.0 36.0 19 33.99811233459795 36.0 36.0 36.0 32.0 36.0 20 33.98833295879655 36.0 36.0 36.0 32.0 36.0 21 33.963362370950044 36.0 36.0 36.0 32.0 36.0 22 33.94121182478729 36.0 36.0 36.0 32.0 36.0 23 33.88231216980176 36.0 36.0 36.0 32.0 36.0 24 33.859743904964596 36.0 36.0 36.0 32.0 36.0 25 33.45152700850859 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 19.0 5 23.0 6 106.0 7 33.0 8 124.0 9 159.0 10 199.0 11 56.0 12 136.0 13 125.0 14 225.0 15 398.0 16 657.0 17 838.0 18 1141.0 19 1628.0 20 2445.0 21 3707.0 22 5736.0 23 8932.0 24 13575.0 25 19536.0 26 27895.0 27 36340.0 28 49425.0 29 66390.0 30 86499.0 31 117392.0 32 165444.0 33 229667.0 34 478410.0 35 952205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.64637344355906 17.233950921224373 11.377364553766999 25.742311081449575 2 17.164400089188376 19.454919770119602 36.7421742046415 26.63850593605052 3 18.590447200595392 23.564561834717015 28.55947465199396 29.285516312693634 4 12.368097640464143 15.128490645271167 35.79534914053883 36.70806257372586 5 14.839631400983851 36.43094761640566 33.19784015889013 15.531580823720354 6 34.78627408812393 35.58260120008743 16.416457485739265 13.21466722604937 7 30.741152582771065 30.240874699584253 20.542024267730426 18.475948449914256 8 28.873150657397105 32.049453329830506 19.013648681767613 20.063747331004777 9 27.404428581757006 13.661656283228913 18.54179855366618 40.392116581347906 10 16.37185933193072 26.02021561203237 30.586231586298602 27.021693469738306 11 37.98580200757603 20.80677786164232 22.034751662986814 19.17266846779484 12 24.971803375834767 23.688779815890815 28.09516922824583 23.244247580028592 13 29.378828256034822 18.823511775111506 25.49638360426172 26.301276364591953 14 24.07138192690813 19.62368044982325 24.512889162855895 31.792048460412726 15 25.454908595017926 27.028477227344734 21.927495918377243 25.58911825926009 16 26.377101455409992 25.362265162578396 23.23924844970264 25.021384932308973 17 24.188990598353534 25.783782854285725 24.621705312197008 25.405521235163736 18 25.42645545204146 24.325710450396578 25.812009458266417 24.43582463929555 19 25.871796138168 24.466030377487286 25.067600580668266 24.594572903676447 20 26.054374999724384 23.744555422131455 24.38725484791784 25.81381473022632 21 27.864018460596828 23.57566908859843 23.889416333112703 24.67089611769204 22 26.54875569037983 23.576153742013183 24.68845404677897 25.186636520828014 23 24.733045471243706 23.458481751657427 25.42688689542456 26.3815858816743 24 25.179324717750433 24.740108146056265 24.84678132747476 25.23378580871854 25 25.124060314502213 24.115481818819244 24.976241893028327 25.78421597365022 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 140.0 1 140.0 2 454.0 3 768.0 4 768.0 5 768.0 6 2300.5 7 3833.0 8 3833.0 9 3833.0 10 4063.5 11 4294.0 12 4294.0 13 4294.0 14 4856.5 15 5419.0 16 5419.0 17 5419.0 18 9551.5 19 13684.0 20 13684.0 21 13684.0 22 21773.5 23 29863.0 24 29863.0 25 29863.0 26 45874.5 27 61886.0 28 61886.0 29 61886.0 30 76123.0 31 90360.0 32 90360.0 33 90360.0 34 112885.0 35 135410.0 36 135410.0 37 135410.0 38 154975.5 39 174541.0 40 174541.0 41 174541.0 42 201127.5 43 227714.0 44 227714.0 45 227714.0 46 256894.5 47 286075.0 48 286075.0 49 286075.0 50 295905.5 51 305736.0 52 305736.0 53 305736.0 54 284044.0 55 262352.0 56 262352.0 57 262352.0 58 245247.5 59 228143.0 60 228143.0 61 228143.0 62 205298.0 63 182453.0 64 182453.0 65 182453.0 66 152216.0 67 121979.0 68 121979.0 69 121979.0 70 91727.0 71 61475.0 72 61475.0 73 61475.0 74 48362.5 75 35250.0 76 35250.0 77 35250.0 78 28518.0 79 21786.0 80 21786.0 81 21786.0 82 14788.5 83 7791.0 84 7791.0 85 7791.0 86 6119.0 87 4447.0 88 4447.0 89 4447.0 90 3169.0 91 1891.0 92 1891.0 93 1891.0 94 1347.5 95 804.0 96 804.0 97 804.0 98 1090.0 99 1376.0 100 1376.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.040229657144619665 2 0.005111325551780812 3 0.0018065892036466663 4 0.003657241558601788 5 0.010090461649636258 6 0.013307071695153496 7 0.023397533344789754 8 0.03639616298078406 9 0.04908635055761918 10 0.05825148602977788 11 0.05560769695127057 12 0.06468470612081235 13 0.06459657981819544 14 0.06860632658726487 15 0.06067495935174292 16 0.0668878636862351 17 0.06446439036427007 18 0.08037118798662243 19 0.07658175697409528 20 0.08138464046671691 21 0.07583268340185154 22 0.0805033774405478 23 0.08587908190017934 24 0.07913741974998569 25 0.08032712483531397 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2269470.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.344976316930946 #Duplication Level Percentage of deduplicated Percentage of total 1 69.76780081989055 26.752446701230586 2 15.254680848790603 11.698807517384315 3 5.967949437229119 6.865226394935757 4 2.875487453662725 4.410419932413171 5 1.5763214190321384 3.0222003740329164 6 0.9939922942802459 2.286876659003273 7 0.6800024023209321 1.8252273208716605 8 0.4728214563221017 1.4504262035846232 9 0.3553835501657815 1.2264456433080357 >10 1.776009606471301 12.23557314641232 >50 0.12723853421597098 3.4068118205358204 >100 0.11712152341739987 9.7116048333343 >500 0.022037426073549592 5.961493570646543 >1k 0.01303784893356599 8.870324782346017 >5k 1.1537919410235388E-4 0.2761150999607047 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6241 0.27499812731606943 No Hit TATCAACGCAGAGTACTTTTTTTTT 4462 0.19660978113832744 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 3716 0.1637386702622198 No Hit GCGCAAGACGGACCAGAGCGAAAGC 3472 0.1529872613429567 No Hit GGGTAGGCACACGCTGAGCCAGTCA 3439 0.1515331773497777 No Hit GAATAGGACCGCGGTTCTATTTTGT 3362 0.14814031469902664 No Hit GATTAAGAGGGACGGCCGGGGGCAT 3318 0.1462015360414546 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 3255 0.14342555750902194 No Hit GTATCTGATCGTCTTCGAACCTCCG 3094 0.13633139014836065 No Hit ATCAGATACCGTCGTAGTTCCGACC 3004 0.13236570653059965 No Hit GAATAACGCCGCCGCATCGCCAGTC 2930 0.129105033333774 No Hit CTATTGGAGCTGGAATTACCGCGGC 2921 0.12870846497199787 No Hit GTCCTATTCCATTATTCCTAGCTGC 2902 0.1278712650971372 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 2898 0.12769501249190338 No Hit GAACTACGACGGTATCTGATCGTCT 2895 0.12756282303797803 No Hit GTACATGGGGAATAATTGCAATCCC 2805 0.12359713942021705 No Hit TCGTAGTTCCGACCATAAACGATGC 2779 0.12245149748619721 No Hit GTGCATGGCCGTTCTTAGTTGGTGG 2700 0.11897050853282926 No Hit CTCTTAATCATGGCCTCAGTTCCGA 2548 0.11227290953394403 No Hit GGTATCAACGCAGAGTACTTTTTTT 2503 0.11029006772506356 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2478 0.10918848894235218 No Hit GCTCTTAGCTGAGTGTCCCGCGGGG 2386 0.1051346790219743 No Hit CTTTAATATACGCTATTGGAGCTGG 2381 0.10491436326543202 No Hit GTATCAACGCAGAGTACATGGGGAA 2375 0.1046499843575813 No Hit GCTTTGAACACTCTAATTTTTTCAA 2298 0.10125712170683022 No Hit CATCTAAGGGCATCACAGACCTGTT 2290 0.10090461649636259 No Hit GTCCTGTATTGTTATTTTTCGTCAC 2280 0.10046398498327805 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3218945392536583E-4 2 0.0 0.0 0.0 0.0 1.3218945392536583E-4 3 0.0 0.0 0.0 0.0 1.3218945392536583E-4 4 0.0 0.0 0.0 0.0 1.3218945392536583E-4 5 0.0 0.0 0.0 0.0 2.6437890785073167E-4 6 1.3218945392536583E-4 0.0 0.0 0.0 3.525052104676422E-4 7 1.3218945392536583E-4 0.0 0.0 0.0 3.525052104676422E-4 8 1.3218945392536583E-4 0.0 0.0 4.4063151308455275E-5 3.965683617760975E-4 9 1.3218945392536583E-4 0.0 0.0 4.4063151308455275E-5 3.965683617760975E-4 10 1.3218945392536583E-4 0.0 0.0 4.4063151308455275E-5 4.8469466439300804E-4 11 1.3218945392536583E-4 0.0 0.0 8.812630261691055E-5 5.287578157014633E-4 12 1.3218945392536583E-4 0.0 0.0 8.812630261691055E-5 0.0011456419340198371 13 1.3218945392536583E-4 0.0 0.0 8.812630261691055E-5 0.0017184629010297558 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 280 0.0 13.57365 16 CGTTATT 235 0.0 13.332904 2 GCGTTAT 245 0.0 13.177983 1 TAACCCG 65 5.460941E-5 13.152228 5 CGCCAGT 510 0.0 13.0430765 18 GCTCGTA 235 0.0 12.937431 9 CGCATCG 530 0.0 12.727375 13 CGGTCCA 560 0.0 12.554241 10 ATCGCCA 550 0.0 12.265644 16 TGCGTAC 140 5.2750693E-11 12.216285 16 CGGACAT 430 0.0 12.149668 5 TATGCCG 55 0.003072022 12.089422 5 GATAACG 315 0.0 12.06387 11 TAATATA 580 0.0 11.954371 4 GTTCTAG 80 2.8804187E-5 11.869874 1 TACGCTA 525 0.0 11.763052 9 TCGCCAG 550 0.0 11.747895 17 ACGGTAT 550 0.0 11.746599 9 TTAATAT 550 0.0 11.741161 3 TTTTCGG 430 0.0 11.71122 16 >>END_MODULE