##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064009_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1009340 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24661263796144 32.0 32.0 32.0 32.0 32.0 2 31.233037430400064 32.0 32.0 32.0 32.0 32.0 3 31.359602314383658 32.0 32.0 32.0 32.0 32.0 4 31.46645332593576 32.0 32.0 32.0 32.0 32.0 5 31.386230606138664 32.0 32.0 32.0 32.0 32.0 6 34.94644916480076 36.0 36.0 36.0 36.0 36.0 7 34.96958705688866 36.0 36.0 36.0 36.0 36.0 8 34.899429330057266 36.0 36.0 36.0 36.0 36.0 9 35.04639764598649 36.0 36.0 36.0 36.0 36.0 10 34.871907385023874 36.0 36.0 36.0 32.0 36.0 11 35.04120811619474 36.0 36.0 36.0 36.0 36.0 12 34.93547565736026 36.0 36.0 36.0 32.0 36.0 13 34.99492935977966 36.0 36.0 36.0 36.0 36.0 14 34.93511799789962 36.0 36.0 36.0 32.0 36.0 15 34.88400043592843 36.0 36.0 36.0 32.0 36.0 16 34.908490696891036 36.0 36.0 36.0 32.0 36.0 17 34.858666059008854 36.0 36.0 36.0 32.0 36.0 18 34.86766302732479 36.0 36.0 36.0 32.0 36.0 19 34.86797610319615 36.0 36.0 36.0 32.0 36.0 20 34.86519507797174 36.0 36.0 36.0 32.0 36.0 21 34.84608159787584 36.0 36.0 36.0 32.0 36.0 22 34.83510313670319 36.0 36.0 36.0 32.0 36.0 23 34.7755731468088 36.0 36.0 36.0 32.0 36.0 24 34.748916123407376 36.0 36.0 36.0 32.0 36.0 25 34.717792815106904 36.0 36.0 36.0 32.0 36.0 26 34.65862345691244 36.0 36.0 36.0 32.0 36.0 27 34.66311550121862 36.0 36.0 36.0 32.0 36.0 28 34.63086868646838 36.0 36.0 36.0 32.0 36.0 29 34.59632928448293 36.0 36.0 36.0 32.0 36.0 30 34.579008064675925 36.0 36.0 36.0 32.0 36.0 31 34.572022311609565 36.0 36.0 36.0 32.0 36.0 32 34.52734559216914 36.0 36.0 36.0 32.0 36.0 33 34.51167396516536 36.0 36.0 36.0 32.0 36.0 34 34.50371827134563 36.0 36.0 36.0 32.0 36.0 35 34.45580082033804 36.0 36.0 36.0 32.0 36.0 36 34.43479006083183 36.0 36.0 36.0 32.0 36.0 37 34.424672558305424 36.0 36.0 36.0 32.0 36.0 38 34.37369568232707 36.0 36.0 36.0 32.0 36.0 39 34.364843362989674 36.0 36.0 36.0 32.0 36.0 40 34.35354191848138 36.0 36.0 36.0 32.0 36.0 41 34.33491984861394 36.0 36.0 36.0 32.0 36.0 42 34.26706659797492 36.0 36.0 36.0 32.0 36.0 43 34.26603523094299 36.0 36.0 36.0 32.0 36.0 44 34.191882814512454 36.0 36.0 36.0 32.0 36.0 45 34.1530604157172 36.0 36.0 36.0 32.0 36.0 46 34.12599421404086 36.0 36.0 36.0 32.0 36.0 47 34.0965343689936 36.0 36.0 36.0 32.0 36.0 48 34.05369647492421 36.0 36.0 36.0 32.0 36.0 49 34.046457090772186 36.0 36.0 36.0 32.0 36.0 50 33.426139853765825 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 0.0 17 0.0 18 1.0 19 4.0 20 6.0 21 35.0 22 112.0 23 328.0 24 799.0 25 1902.0 26 3933.0 27 7509.0 28 12531.0 29 19712.0 30 28734.0 31 41896.0 32 60960.0 33 99038.0 34 199010.0 35 532829.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.40495690893706 18.30859899054553 12.028936109498265 26.257507991019146 2 15.685507161660226 20.271406958853024 37.64367161283739 26.399414266649362 3 18.326008385711003 24.207597866320036 28.95814674201653 28.50824700595243 4 11.906592426734301 15.911486714090394 36.296490776150755 35.88543008302455 5 13.908890958448094 37.4048388055561 33.362890601779384 15.323379634216419 6 34.0821725087681 36.54506905502606 16.315810331503755 13.056948104702082 7 29.98400932096087 30.780174728386328 20.512751922547253 18.72306402810555 8 27.98987457150217 33.5955178631581 18.975766342362334 19.43884122297739 9 27.186153190730483 13.786373138616707 18.418356731693304 40.6091169389595 10 15.405436466890974 27.04125104524577 31.669460593739224 25.88385189412403 11 37.88816245087131 20.904473125481132 22.33778740343928 18.869577020208276 12 24.685090623755375 23.776871573249 29.08827370018765 22.44976410280798 13 29.555341773857492 19.66241205860877 25.49911476543513 25.283131402098608 14 23.369399913012202 19.883349168810813 25.258164517896404 31.48908640028058 15 25.028831635140115 28.049614191109157 22.145569043344548 24.77598513040618 16 25.661277634559028 25.934923424753354 24.204376351138475 24.19942258954915 17 23.46781064854261 26.37119305684903 25.50468623060614 24.65631006400222 18 24.416150815981993 25.38579818811575 26.568754111613973 23.629296884288284 19 25.503596409534946 24.90795965680544 25.414132007054114 24.174311926605505 20 25.89474309945113 24.580319812947074 25.03279370677869 24.492143380823112 21 26.809301127469435 24.217508470881963 24.504230487249092 24.46895991439951 22 25.980765629783452 24.72707385724717 25.040843561974718 24.25131695099466 23 24.333942645405145 24.518618694486964 25.705836020746332 25.44160263936156 24 24.950933137297056 25.083495403418283 25.48643317345941 24.47913828582525 25 24.787827027755373 24.748691690824895 25.562706698978914 24.900774582440814 26 24.099788861686076 25.678619942117788 26.27676259869552 23.944828597500624 27 24.783658943054792 25.016001410898397 25.50436645311636 24.69597319293045 28 23.964002524539456 25.128877342852867 26.03763228319229 24.869487849415385 29 24.323405857408947 25.011889192723814 25.70720881385487 24.957496136012363 30 24.105105572228126 25.413921801945687 26.0103694705982 24.470603155227984 31 25.106934042230648 24.96683236447838 24.900546634339577 25.025686958951397 32 24.653354007420873 25.22175931200864 24.716664272303493 25.408222408266994 33 24.193524416451417 24.89242533679316 25.75232909177558 25.161721154979844 34 24.936738960279794 25.101009600618244 25.925236052352595 24.037015386749363 35 25.37092355630855 24.874938695438942 25.58780547010071 24.1663322781518 36 24.015650900501452 25.501872143358916 25.451538783934147 25.03093817220548 37 25.26924441150652 25.147477573699156 24.967551961446777 24.615726053347547 38 24.461438159764263 25.17710961078491 25.45721527214935 24.904236957301475 39 25.304267874623008 24.707918692807347 25.041018202570477 24.946795229999168 40 25.497117855819475 25.28608426680194 25.375055235317312 23.841742642061273 41 24.346526001240466 25.514268333039396 26.01035571258439 24.128849953135745 42 25.663312619881744 25.83887497424029 25.02387727279933 23.47393513307864 43 24.64828083635845 24.908255789990964 25.64627157871376 24.79719179493683 44 24.437374855225887 25.470930745216386 25.000916448617943 25.09077795093978 45 24.505611654486945 25.87721731686825 24.946399980977443 24.67077104766736 46 24.439975032942645 25.097936254743246 24.98102701792278 25.48106169439133 47 24.790900065984626 25.137071669609224 25.30986024337033 24.76216802103582 48 25.42404619329373 25.669160745211645 24.359472280457016 24.547320781037605 49 24.79015907487695 25.734443237930677 24.81443245856682 24.660965228625553 50 24.86243295030545 26.03787081676287 24.44779981888904 24.651896414042636 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 9.5 2 10.0 3 39.0 4 68.0 5 90.5 6 113.0 7 111.5 8 110.0 9 152.5 10 195.0 11 325.5 12 456.0 13 862.0 14 1268.0 15 1757.5 16 2247.0 17 2372.5 18 2498.0 19 2528.5 20 2559.0 21 2878.0 22 3197.0 23 3811.0 24 4425.0 25 5519.5 26 6614.0 27 8310.5 28 10007.0 29 11750.0 30 13493.0 31 15566.5 32 17640.0 33 20799.5 34 23959.0 35 27980.0 36 32001.0 37 37115.5 38 42230.0 39 45316.0 40 48402.0 41 52241.0 42 56080.0 43 56628.5 44 57177.0 45 62404.0 46 67631.0 47 70695.5 48 73760.0 49 75717.5 50 77675.0 51 74490.0 52 71305.0 53 70122.0 54 68939.0 55 68928.5 56 68918.0 57 66413.5 58 63909.0 59 57880.5 60 51852.0 61 45676.5 62 39501.0 63 34789.5 64 30078.0 65 25819.5 66 21561.0 67 19241.0 68 16921.0 69 15246.0 70 13571.0 71 10152.0 72 6733.0 73 5677.5 74 4622.0 75 3595.5 76 2569.0 77 2213.0 78 1857.0 79 1567.5 80 1278.0 81 1042.0 82 806.0 83 666.0 84 526.0 85 385.5 86 245.0 87 184.0 88 123.0 89 95.5 90 68.0 91 59.0 92 50.0 93 36.0 94 22.0 95 29.0 96 36.0 97 23.5 98 11.0 99 13.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00812412071254483 2 6.93522499851388E-4 3 3.9629857134365035E-4 4 0.0 5 0.0 6 0.0 7 1.9814928567182517E-4 8 0.0 9 9.907464283591258E-4 10 7.925971426873007E-4 11 9.907464283591259E-5 12 1.9814928567182517E-4 13 2.972239285077377E-4 14 2.972239285077377E-4 15 0.003170388570749203 16 5.944478570154754E-4 17 0.0 18 3.9629857134365035E-4 19 0.0 20 0.0 21 0.0 22 9.907464283591259E-5 23 4.953732141795629E-4 24 2.972239285077377E-4 25 0.0021796421423900766 26 0.004854657498959716 27 0.005350030713139279 28 0.004656508213287891 29 0.0019814928567182515 30 0.00307131392791329 31 0.007232448927021619 32 0.0024768660708978144 33 0.004062060356272415 34 0.0029722392850773773 35 0.00346761249925694 36 0.006836150355677968 37 0.0033685378564210274 38 0.0077278221412011815 39 0.003170388570749203 40 0.0021796421423900766 41 0.004161134999108328 42 0.0011888957140309508 43 0.0011888957140309508 44 8.916717855232131E-4 45 0.0011888957140309508 46 9.907464283591258E-4 47 0.001387044999702776 48 0.0015851942853746014 49 3.9629857134365035E-4 50 0.001387044999702776 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1009340.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.91577858192838 #Duplication Level Percentage of deduplicated Percentage of total 1 76.4250488478139 41.96941060639609 2 13.790444569135765 15.146260010100326 3 4.583811453115678 7.551707244618239 4 1.9110360102608182 4.197841216062996 5 0.9680980727290496 2.658192970379004 6 0.5216720239593791 1.7188815216083817 7 0.35576022813106134 1.3675794941411186 8 0.24175062033142455 1.0620738830531475 9 0.17435126080815774 0.8617171710618755 >10 0.8618251346890325 8.656047964753872 >50 0.08092568118685123 3.122750033452108 >100 0.07654848044083255 8.235695263232861 >500 0.0072730144984507515 2.5694609826380064 >1k 0.0014546028996901502 0.8823816385020037 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1275 0.12632016961578854 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1166 0.11552103354667406 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1117 0.11066637604771434 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1094 0.10838765926248835 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1067 0.10571264390591872 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1066 0.10561356926308281 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1031 0.10214595676382586 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1021 0.10115521033546675 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.907464283591257E-5 2 0.0 0.0 0.0 0.0 9.907464283591257E-5 3 0.0 0.0 0.0 0.0 9.907464283591257E-5 4 0.0 0.0 0.0 0.0 9.907464283591257E-5 5 0.0 0.0 0.0 0.0 9.907464283591257E-5 6 0.0 0.0 0.0 0.0 9.907464283591257E-5 7 0.0 0.0 0.0 0.0 9.907464283591257E-5 8 0.0 0.0 0.0 0.0 9.907464283591257E-5 9 0.0 0.0 0.0 0.0 9.907464283591257E-5 10 0.0 0.0 0.0 0.0 9.907464283591257E-5 11 0.0 0.0 0.0 0.0 9.907464283591257E-5 12 0.0 0.0 0.0 0.0 4.953732141795629E-4 13 0.0 0.0 0.0 0.0 4.953732141795629E-4 14 0.0 0.0 0.0 0.0 4.953732141795629E-4 15 0.0 0.0 0.0 0.0 4.953732141795629E-4 16 0.0 0.0 0.0 0.0 6.935224998513881E-4 17 0.0 0.0 0.0 0.0 6.935224998513881E-4 18 0.0 0.0 0.0 0.0 7.925971426873006E-4 19 0.0 0.0 0.0 0.0 7.925971426873006E-4 20 0.0 0.0 0.0 0.0 8.916717855232132E-4 21 0.0 0.0 0.0 0.0 8.916717855232132E-4 22 0.0 0.0 0.0 0.0 9.907464283591258E-4 23 0.0 0.0 0.0 9.907464283591257E-5 9.907464283591258E-4 24 0.0 0.0 0.0 9.907464283591257E-5 0.0010898210711950383 25 0.0 0.0 0.0 9.907464283591257E-5 0.0010898210711950383 26 0.0 0.0 0.0 9.907464283591257E-5 0.0010898210711950383 27 0.0 0.0 0.0 9.907464283591257E-5 0.0010898210711950383 28 0.0 0.0 0.0 3.962985713436503E-4 0.0010898210711950383 29 0.0 0.0 0.0 9.907464283591258E-4 0.0010898210711950383 30 0.0 0.0 0.0 0.0014861196425386886 0.0010898210711950383 31 0.0 0.0 0.0 0.004260209641944241 0.0010898210711950383 32 0.0 0.0 0.0 0.00614262785582658 0.0010898210711950383 33 0.0 0.0 0.0 0.007925971426873006 0.0010898210711950383 34 0.0 0.0 0.0 0.01079913606911447 0.0012879703568668636 35 0.0 0.0 0.0 0.013969524639863673 0.0012879703568668636 36 0.0 0.0 0.0 0.01922048071016704 0.0012879703568668636 37 0.0 0.0 0.0 0.029524243565101947 0.0012879703568668636 38 0.0 0.0 0.0 0.043691917490637444 0.0012879703568668636 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1975 0.0 24.285238 1 GTCCTAC 505 0.0 21.348024 1 GTATGAC 105 7.7494406E-8 20.950731 3 GTATTAC 130 1.6225385E-9 20.30911 1 GATTTCG 240 0.0 20.166075 41 GATATAC 285 0.0 19.299593 1 TCCTACA 505 0.0 19.166805 2 GTATAGA 175 9.094947E-12 18.85846 1 GGTATCA 890 0.0 18.540619 1 CGTCTTA 95 1.5977681E-5 18.524857 15 GTAGGAC 620 0.0 18.45016 3 AATCACG 255 0.0 18.118914 34 AACGCAG 2625 0.0 18.017628 6 ATCACGG 260 0.0 17.771353 35 GCGAGAA 360 0.0 17.72346 20 TAGGACG 525 0.0 17.598612 4 TCGACGC 75 0.0012913526 17.598612 14 GCACACG 445 0.0 17.302006 7 GTATAAT 115 4.2686315E-6 17.218594 1 TGTAGGA 680 0.0 17.145706 2 >>END_MODULE