##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064007_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1514091 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.314316642790956 32.0 32.0 32.0 32.0 32.0 2 31.41478088173036 32.0 32.0 32.0 32.0 32.0 3 31.48786367530089 32.0 32.0 32.0 32.0 32.0 4 31.564643736737093 32.0 32.0 32.0 32.0 32.0 5 31.53724710073569 32.0 32.0 32.0 32.0 32.0 6 35.11234595542804 36.0 36.0 36.0 36.0 36.0 7 35.12884298235707 36.0 36.0 36.0 36.0 36.0 8 35.074809902443114 36.0 36.0 36.0 36.0 36.0 9 35.19526831610518 36.0 36.0 36.0 36.0 36.0 10 35.04584136620586 36.0 36.0 36.0 36.0 36.0 11 35.18539440495981 36.0 36.0 36.0 36.0 36.0 12 35.097914854523275 36.0 36.0 36.0 36.0 36.0 13 35.13443973975144 36.0 36.0 36.0 36.0 36.0 14 35.08368849692654 36.0 36.0 36.0 36.0 36.0 15 35.05027174720674 36.0 36.0 36.0 36.0 36.0 16 35.06676613228663 36.0 36.0 36.0 36.0 36.0 17 35.03788015383488 36.0 36.0 36.0 36.0 36.0 18 35.02910591239232 36.0 36.0 36.0 36.0 36.0 19 35.02869774670083 36.0 36.0 36.0 36.0 36.0 20 35.019748482753016 36.0 36.0 36.0 36.0 36.0 21 35.018479074243224 36.0 36.0 36.0 36.0 36.0 22 34.98991540138605 36.0 36.0 36.0 36.0 36.0 23 34.941092047968056 36.0 36.0 36.0 36.0 36.0 24 34.91734512654788 36.0 36.0 36.0 36.0 36.0 25 34.890680943219394 36.0 36.0 36.0 32.0 36.0 26 34.833706164292636 36.0 36.0 36.0 32.0 36.0 27 34.826139908367466 36.0 36.0 36.0 32.0 36.0 28 34.80245374947741 36.0 36.0 36.0 32.0 36.0 29 34.7600177268077 36.0 36.0 36.0 32.0 36.0 30 34.74688641567779 36.0 36.0 36.0 32.0 36.0 31 34.74091055293242 36.0 36.0 36.0 32.0 36.0 32 34.699238685125266 36.0 36.0 36.0 32.0 36.0 33 34.675452796430335 36.0 36.0 36.0 32.0 36.0 34 34.66531668175823 36.0 36.0 36.0 32.0 36.0 35 34.620715003259384 36.0 36.0 36.0 32.0 36.0 36 34.599719567714224 36.0 36.0 36.0 32.0 36.0 37 34.57803130723318 36.0 36.0 36.0 32.0 36.0 38 34.547606451659775 36.0 36.0 36.0 32.0 36.0 39 34.52927532096816 36.0 36.0 36.0 32.0 36.0 40 34.52278363717901 36.0 36.0 36.0 32.0 36.0 41 34.51103269222259 36.0 36.0 36.0 32.0 36.0 42 34.46069555924974 36.0 36.0 36.0 32.0 36.0 43 34.44485172951956 36.0 36.0 36.0 32.0 36.0 44 34.38826464195349 36.0 36.0 36.0 32.0 36.0 45 34.35993543320712 36.0 36.0 36.0 32.0 36.0 46 34.31927010992074 36.0 36.0 36.0 32.0 36.0 47 34.30210799747175 36.0 36.0 36.0 32.0 36.0 48 34.25100803056091 36.0 36.0 36.0 32.0 36.0 49 34.23688008184449 36.0 36.0 36.0 32.0 36.0 50 33.65509668837606 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 2.0 18 3.0 19 4.0 20 15.0 21 36.0 22 145.0 23 485.0 24 1219.0 25 2904.0 26 5802.0 27 10261.0 28 17135.0 29 26188.0 30 37836.0 31 53580.0 32 76849.0 33 122276.0 34 255645.0 35 903705.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.26719521676036 18.156243952090982 12.026132911655777 26.550427919492876 2 15.511028450204876 20.415644046169167 38.03738762182283 26.03593988180312 3 18.230704657538592 24.52923650817029 28.879724559353747 28.360334274937372 4 12.138768409560589 16.416912853983018 36.279721628356555 35.16459710809984 5 13.991827439698143 37.24994072351001 33.690577382733274 15.067654454058573 6 33.68808987576696 36.080682125897404 17.0250777694853 13.206150228850333 7 29.810315106763795 30.55128823253572 20.999280095635 18.639116565065486 8 27.551382314537236 34.01440204056427 19.20584694050754 19.228368704390952 9 27.49023166604583 13.93041036249171 18.455678578882434 40.12367939258003 10 15.76832821138743 27.040505972961675 31.950969338994884 25.240196476656013 11 36.894744107190384 20.840359000879076 23.178461532364963 19.086435359565574 12 24.97473730095305 23.32278794523443 29.421764888480872 22.28070986533165 13 29.897720202736703 19.852689616546527 25.16680074130727 25.082789439409492 14 23.31700667332414 19.954322337935444 25.307974173231674 31.42069681550874 15 24.88294446921286 28.075295982563038 22.064893248129984 24.97686630009412 16 25.149563363481576 25.75620478259319 24.630764414420963 24.463467439504278 17 23.659278075095884 26.26533015518882 25.54760579119749 24.527785978517805 18 24.330636218394318 25.047768060884216 26.98827742395252 23.633318296768945 19 25.798251227964503 24.58676526047642 25.396954344223694 24.218029167335384 20 25.961539731665788 24.582816518524094 25.190907757968194 24.26473599184192 21 26.442069862379476 24.129064897684486 24.51279348467166 24.91607175526438 22 25.84684641843803 24.811239505233512 24.843998499426718 24.49791557690174 23 24.31945292046106 24.709129528504516 25.619387666140938 25.352029884893497 24 25.01936815881296 24.86798940348713 25.53955100215774 24.573091435542175 25 24.89987133863302 24.69855724902447 25.68379421578651 24.717777196555996 26 24.186557710115867 25.530614967787272 26.02493530374545 24.257892018351413 27 24.778449513173477 25.259628702718445 25.18987918670479 24.772042597403285 28 24.263585962196156 25.11634542603628 25.498769505939794 25.12129910582777 29 24.569017615771305 24.8673582815789 25.256317365249686 25.307306737400108 30 24.358844801109626 25.025808688760094 25.691517643367845 24.923828866762438 31 25.28556916341809 24.61997867891154 24.95492056111187 25.139531596558506 32 24.622431523813926 25.333513866964324 24.9545913885458 25.089463220675945 33 24.305773426163274 25.059724984362852 25.583032754456177 25.051468835017698 34 24.885505762689476 24.97539711370166 25.78996730623163 24.349129817377232 35 25.141376153696783 25.036425577558408 25.575709060358797 24.246489208386006 36 24.351853503138436 25.33344429979174 25.404383571415835 24.910318625653993 37 25.04942104884246 25.068641262959606 24.895395140522222 24.986542547675707 38 24.662841864280725 25.258953564714943 25.26879518724843 24.809409383755906 39 25.271709516025165 24.73757038358019 24.977526791169236 25.013193309225407 40 25.75700934579439 24.868201182259504 25.31950728179386 24.05528219015224 41 24.75946852236033 24.866797046054835 25.89972675809075 24.474007673494082 42 25.4344418913537 25.602399890625854 25.157704173323676 23.805454044696774 43 24.51579155243255 24.947211784931863 25.723860669493924 24.81313599314166 44 24.324679553438802 25.340161777050962 25.174448287682317 25.160710381827922 45 24.4124921981553 25.449501837767862 25.22969621515589 24.90830974892095 46 24.5304228654459 24.789789145187655 25.249805987153874 25.42998200221257 47 25.077341716972906 24.895314584626764 25.422440326010857 24.60490337238947 48 25.054357158897268 25.42310080181763 24.71843916357344 24.80410287571166 49 24.800655181182034 25.268858749673896 24.906659797831693 25.023826271312377 50 24.559579674584644 25.97497465432462 24.622522811107846 24.842922859982895 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 25.5 2 31.0 3 70.0 4 109.0 5 148.0 6 187.0 7 189.0 8 191.0 9 239.5 10 288.0 11 445.5 12 603.0 13 1084.0 14 1565.0 15 2274.5 16 2984.0 17 3203.5 18 3423.0 19 3569.5 20 3716.0 21 4181.0 22 4646.0 23 5316.5 24 5987.0 25 7337.0 26 8687.0 27 11494.5 28 14302.0 29 17730.0 30 21158.0 31 24815.0 32 28472.0 33 34174.5 34 39877.0 35 46781.5 36 53686.0 37 59815.5 38 65945.0 39 67928.0 40 69911.0 41 74103.5 42 78296.0 43 80026.5 44 81757.0 45 89114.5 46 96472.0 47 101824.0 48 107176.0 49 110054.0 50 112932.0 51 111041.5 52 109151.0 53 108344.0 54 107537.0 55 106981.0 56 106425.0 57 102849.5 58 99274.0 59 90239.0 60 81204.0 61 71468.0 62 61732.0 63 53548.5 64 45365.0 65 38490.5 66 31616.0 67 27244.0 68 22872.0 69 20206.5 70 17541.0 71 13750.0 72 9959.0 73 8602.0 74 7245.0 75 5657.0 76 4069.0 77 3508.0 78 2947.0 79 2499.5 80 2052.0 81 1651.0 82 1250.0 83 980.5 84 711.0 85 532.0 86 353.0 87 258.0 88 163.0 89 117.5 90 72.0 91 58.0 92 44.0 93 38.0 94 32.0 95 29.5 96 27.0 97 22.0 98 17.0 99 14.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00911437951880039 2 4.623235987797299E-4 3 5.283698271768341E-4 4 0.0 5 0.0 6 6.604622839710426E-5 7 6.604622839710426E-5 8 0.0 9 9.90693425956564E-4 10 0.0011888321111478768 11 0.0 12 6.604622839710426E-5 13 5.944160555739384E-4 14 1.9813868519131283E-4 15 0.004359051074208882 16 0.0011227858827507727 17 0.0 18 2.6418491358841704E-4 19 0.0 20 5.944160555739384E-4 21 0.0 22 1.9813868519131283E-4 23 9.90693425956564E-4 24 5.283698271768341E-4 25 0.0025758029074870663 26 0.006142299240930698 27 0.006736715296504636 28 0.004293004845811778 29 0.0033023114198552136 30 0.004359051074208882 31 0.006406484154519115 32 0.0040288199322233605 33 0.004491143531003091 34 0.002707895364281275 35 0.0029720802778696923 36 0.007925547407652512 37 0.003962773703826256 38 0.007463223808872783 39 0.004359051074208882 40 0.002707895364281275 41 0.0031702189630610053 42 0.001453017024736294 43 0.001453017024736294 44 0.0021134793087073363 45 0.0017172019383247111 46 0.0010567396543536682 47 0.0020474330803102324 48 0.0020474330803102324 49 3.9627737038262567E-4 50 0.0017172019383247111 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1514091.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.922828774846906 #Duplication Level Percentage of deduplicated Percentage of total 1 79.5553647771225 46.87627136882876 2 12.389865188475456 14.600918100879511 3 3.512520897923922 6.209030023093284 4 1.4665739591695859 3.456587451271953 5 0.7634086598122742 2.249109887367699 6 0.47720607208940385 1.6870999005624714 7 0.3275226632751886 1.3508993265632045 8 0.2400650967050006 1.131625167037265 9 0.17511016217358147 0.9286187492240652 >10 0.9672265753582994 10.231804228316626 >50 0.06401895239763525 2.60592432662048 >100 0.05615557708869885 6.554368085227702 >500 0.004510380371410784 1.8197550847699473 >1k 4.510380371410784E-4 0.29798830023707373 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.981386851913128E-4 2 0.0 0.0 0.0 0.0 2.641849135884171E-4 3 0.0 0.0 0.0 0.0 2.641849135884171E-4 4 0.0 0.0 0.0 0.0 2.641849135884171E-4 5 0.0 0.0 0.0 0.0 2.641849135884171E-4 6 0.0 0.0 0.0 0.0 3.962773703826256E-4 7 0.0 0.0 0.0 0.0 3.962773703826256E-4 8 0.0 0.0 0.0 0.0 3.962773703826256E-4 9 0.0 0.0 0.0 0.0 3.962773703826256E-4 10 0.0 0.0 0.0 0.0 3.962773703826256E-4 11 0.0 0.0 0.0 0.0 3.962773703826256E-4 12 0.0 0.0 0.0 0.0 7.26508512368147E-4 13 0.0 0.0 0.0 0.0 8.586009691623555E-4 14 0.0 0.0 0.0 0.0 8.586009691623555E-4 15 0.0 0.0 0.0 0.0 0.0011227858827507725 16 0.0 0.0 0.0 0.0 0.0011227858827507725 17 0.0 0.0 0.0 0.0 0.0011227858827507725 18 0.0 0.0 0.0 6.604622839710427E-5 0.0013209245679420853 19 0.0 0.0 0.0 6.604622839710427E-5 0.0013209245679420853 20 0.0 0.0 0.0 1.3209245679420855E-4 0.0016511557099276068 21 0.0 0.0 0.0 2.641849135884171E-4 0.0016511557099276068 22 0.0 0.0 0.0 3.962773703826256E-4 0.0016511557099276068 23 0.0 0.0 0.0 7.26508512368147E-4 0.0016511557099276068 24 0.0 0.0 0.0 0.0011227858827507725 0.0016511557099276068 25 0.0 0.0 0.0 0.0013869707963391896 0.0016511557099276068 26 0.0 0.0 0.0 0.0017832481667218153 0.0016511557099276068 27 0.0 0.0 0.0 0.001981386851913128 0.0016511557099276068 28 0.0 0.0 0.0 0.003038126506266796 0.001717201938324711 29 0.0 0.0 0.0 0.006406484154519114 0.001717201938324711 30 0.0 0.0 0.0 0.012020413568272976 0.001717201938324711 31 0.0 0.0 0.0 0.028862201809534565 0.001717201938324711 32 0.0 0.0 0.0 0.04755328444591508 0.001717201938324711 33 0.0 0.0 0.0 0.06525367365633902 0.001717201938324711 34 0.0 0.0 0.0 0.08724706771257473 0.001717201938324711 35 0.0 0.0 0.0 0.11016510896636993 0.001717201938324711 36 0.0 0.0 0.0 0.14450914773286413 0.001717201938324711 37 0.0 0.0 0.0 0.19536474359863443 0.001717201938324711 38 0.0 0.0 0.0 0.2649114221007852 0.0017832481667218153 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2355 0.0 21.205818 1 ATACCGT 275 0.0 20.798502 6 CGGATCG 55 0.004480853 20.002523 26 ACCGTCG 265 0.0 19.923092 8 CCGTCGT 300 0.0 19.799227 9 GGTATCA 1185 0.0 19.493553 1 TAATACC 260 0.0 19.460136 4 CGTCGTA 295 0.0 19.388432 10 TAGGACG 965 0.0 19.14888 4 TACCGTC 280 0.0 18.855785 7 GTAGGAC 1160 0.0 18.774508 3 GTCGTAG 305 0.0 18.752747 11 GATATAC 435 0.0 18.712532 1 TGTAGGA 1130 0.0 18.688301 2 ACGGTAT 310 0.0 18.450891 9 TTAGGAC 685 0.0 18.30525 3 TACGACG 320 0.0 17.873713 5 CATATAG 125 4.8598304E-7 17.59815 2 GTATAAA 240 0.0 17.416561 1 TAACGGC 140 8.367351E-8 17.287325 36 >>END_MODULE