##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064006_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1288718 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31730060416631 32.0 32.0 32.0 32.0 32.0 2 31.390603685212746 32.0 32.0 32.0 32.0 32.0 3 31.473769280789124 32.0 32.0 32.0 32.0 32.0 4 31.5675663721621 32.0 32.0 32.0 32.0 32.0 5 31.507825606533004 32.0 32.0 32.0 32.0 32.0 6 35.09424792700963 36.0 36.0 36.0 36.0 36.0 7 35.11117948224515 36.0 36.0 36.0 36.0 36.0 8 35.05760841394316 36.0 36.0 36.0 36.0 36.0 9 35.17905158459803 36.0 36.0 36.0 36.0 36.0 10 35.02611354850324 36.0 36.0 36.0 36.0 36.0 11 35.17434147734415 36.0 36.0 36.0 36.0 36.0 12 35.07223302537871 36.0 36.0 36.0 36.0 36.0 13 35.130969692360935 36.0 36.0 36.0 36.0 36.0 14 35.06990125070031 36.0 36.0 36.0 36.0 36.0 15 35.042106186147784 36.0 36.0 36.0 36.0 36.0 16 35.05622952422485 36.0 36.0 36.0 36.0 36.0 17 35.022360981999164 36.0 36.0 36.0 36.0 36.0 18 35.010993871428816 36.0 36.0 36.0 36.0 36.0 19 35.01563026201232 36.0 36.0 36.0 36.0 36.0 20 35.003286211568394 36.0 36.0 36.0 36.0 36.0 21 35.00482727796151 36.0 36.0 36.0 36.0 36.0 22 34.987025866015685 36.0 36.0 36.0 36.0 36.0 23 34.93351454701494 36.0 36.0 36.0 36.0 36.0 24 34.90686946252012 36.0 36.0 36.0 32.0 36.0 25 34.8820137532028 36.0 36.0 36.0 32.0 36.0 26 34.8237775836141 36.0 36.0 36.0 32.0 36.0 27 34.81363184187697 36.0 36.0 36.0 32.0 36.0 28 34.79348080805886 36.0 36.0 36.0 32.0 36.0 29 34.76461801573347 36.0 36.0 36.0 32.0 36.0 30 34.748498119836924 36.0 36.0 36.0 32.0 36.0 31 34.73856033670671 36.0 36.0 36.0 32.0 36.0 32 34.6987052248824 36.0 36.0 36.0 32.0 36.0 33 34.68413648292334 36.0 36.0 36.0 32.0 36.0 34 34.6697089665854 36.0 36.0 36.0 32.0 36.0 35 34.623255824780905 36.0 36.0 36.0 32.0 36.0 36 34.590680816128895 36.0 36.0 36.0 32.0 36.0 37 34.595838655159625 36.0 36.0 36.0 32.0 36.0 38 34.554401350799786 36.0 36.0 36.0 32.0 36.0 39 34.550122680058784 36.0 36.0 36.0 32.0 36.0 40 34.52159743248717 36.0 36.0 36.0 32.0 36.0 41 34.508099522160784 36.0 36.0 36.0 32.0 36.0 42 34.4376046582728 36.0 36.0 36.0 32.0 36.0 43 34.42728742828144 36.0 36.0 36.0 32.0 36.0 44 34.37230099990844 36.0 36.0 36.0 32.0 36.0 45 34.335964113172935 36.0 36.0 36.0 32.0 36.0 46 34.32328562183503 36.0 36.0 36.0 32.0 36.0 47 34.28042830161447 36.0 36.0 36.0 32.0 36.0 48 34.234913301436 36.0 36.0 36.0 32.0 36.0 49 34.226356735918955 36.0 36.0 36.0 32.0 36.0 50 33.629335510173675 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 1.0 19 1.0 20 5.0 21 47.0 22 112.0 23 408.0 24 1000.0 25 2362.0 26 4734.0 27 8877.0 28 14407.0 29 22112.0 30 31763.0 31 45137.0 32 66188.0 33 107469.0 34 226567.0 35 757527.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.94086560138196 18.829014587069604 12.139387726436377 26.090732085112062 2 15.76110994715646 20.93217248256008 37.221329856988774 26.08538771329469 3 17.239653453246063 25.246000861323104 29.646818730285595 27.867526955145244 4 11.69076555150157 16.778534947133508 37.42758307092785 34.10311643043707 5 13.645498860107486 37.6954461720873 34.036616234117936 14.622438733687277 6 32.74163235597658 37.32946177351996 17.156793516637517 12.772112353865946 7 29.511001648152114 31.275781475515164 21.388963898950582 17.824252977382137 8 27.802979395026682 33.065573694167384 19.617169931668528 19.514276979137406 9 27.448415109478457 14.080768153357528 18.842772683500673 39.628044053663345 10 15.347141984730456 26.851445904389585 32.35548133830058 25.445930772579377 11 36.41730496299808 21.65797455919337 23.205560258768994 18.71916021903956 12 24.2152466367713 24.45703750319116 29.224492266339315 22.103223593698228 13 28.83577827525869 19.843487504995284 25.763027511901388 25.557706707844634 14 23.239327328371274 20.276912141735316 25.83494217482261 30.6488183550708 15 25.16524891709385 27.553617628206624 22.577526147275236 24.70360730742429 16 25.55307245229726 26.056056056056054 24.075005237795935 24.31586625385075 17 23.51422110966092 26.267344756572037 25.5698298619248 24.64860427184225 18 24.323862939758737 25.346274359479732 26.499591066470714 23.830271634290824 19 25.120002979705415 25.460729189783954 25.85142754272075 23.56784028778988 20 25.26229697736731 24.769556556900653 25.42346577316404 24.544680692568 21 26.53932047197292 24.495739176452876 24.83592221106557 24.129018140508627 22 25.503621824841023 24.581462930128072 25.355489770818217 24.559425474212684 23 24.16357829261025 24.554048097934047 25.83712008343266 25.44525352602304 24 24.40135918759132 25.477162839457414 25.483525786619342 24.637952186331923 25 24.509486684653773 24.80055497745404 25.843000044230585 24.846958293661604 26 24.33733593448088 25.456636418238453 26.228677496504126 23.97735015077654 27 24.9757498156986 25.40084584642843 25.04225352112676 24.58115081674621 28 24.22319376351195 24.899935903106606 26.127476770696077 24.749393562685366 29 24.27375749599593 25.194306147027053 25.941267397539203 24.590668959437817 30 24.365705576886665 25.285874804838453 26.09725020098147 24.251169417293408 31 24.853118862168806 24.964089686154335 25.268056621504904 24.91473483017196 32 24.304912135306818 25.268839732875193 25.171298516473367 25.254949615344625 33 24.227920121800754 24.9662052578566 25.540056275423655 25.265818344918994 34 24.830679980507245 24.95499284541439 25.939718348330544 24.27460882574782 35 25.422388593626206 24.918696064121278 25.609090831492303 24.04982451076021 36 24.355885208232937 25.190493152024363 25.42353152070922 25.03009011903348 37 25.425901582862437 25.122800265077856 25.080043269148693 24.371254882911014 38 24.400926576207787 25.05860943726404 25.734140918738333 24.806323067789837 39 24.909518976183158 25.337557850431608 24.753776767949542 24.99914640543569 40 25.021572327824888 25.449216567547772 25.619932830910198 23.909278273717145 41 24.153004022745897 25.71430123413871 25.784994164535274 24.34770057858012 42 25.328083582163675 25.755802764965512 25.112672034366522 23.803441618504287 43 24.556879713075638 24.90994814937821 25.583416491943055 24.949755645603094 44 24.37425312330255 25.33429037014045 25.201132924652754 25.090323581904244 45 24.62726060796057 25.536082042240952 25.344804306969337 24.491853042829142 46 24.55158264264968 25.251901336153747 25.196962207621798 24.999553813574778 47 24.687802875635626 25.234327289206316 25.565826976097412 24.512042859060642 48 25.221230697602238 25.736556219445955 24.703965236284628 24.338247846667187 49 24.372650275662192 25.719883760179712 25.199753242571088 24.707712721587008 50 24.393014693044567 25.86115519067591 25.06523991138391 24.680590204895612 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 59.0 1 40.0 2 21.0 3 83.5 4 146.0 5 181.5 6 217.0 7 198.0 8 179.0 9 241.0 10 303.0 11 453.5 12 604.0 13 1154.5 14 1705.0 15 2284.5 16 2864.0 17 3247.5 18 3631.0 19 3724.0 20 3817.0 21 4372.0 22 4927.0 23 5643.0 24 6359.0 25 7977.5 26 9596.0 27 12424.0 28 15252.0 29 17575.0 30 19898.0 31 21580.0 32 23262.0 33 27115.5 34 30969.0 35 35619.5 36 40270.0 37 47494.5 38 54719.0 39 59054.5 40 63390.0 41 68868.0 42 74346.0 43 74425.5 44 74505.0 45 80410.0 46 86315.0 47 89888.5 48 93462.0 49 95770.5 50 98079.0 51 94385.0 52 90691.0 53 89022.0 54 87353.0 55 86605.0 56 85857.0 57 83424.0 58 80991.0 59 73723.5 60 66456.0 61 58047.0 62 49638.0 63 43108.5 64 36579.0 65 31288.0 66 25997.0 67 22352.5 68 18708.0 69 16975.5 70 15243.0 71 11648.5 72 8054.0 73 6760.5 74 5467.0 75 4288.0 76 3109.0 77 2682.0 78 2255.0 79 1875.5 80 1496.0 81 1167.0 82 838.0 83 703.5 84 569.0 85 399.0 86 229.0 87 165.0 88 101.0 89 84.5 90 68.0 91 57.0 92 46.0 93 38.0 94 30.0 95 25.5 96 21.0 97 18.0 98 15.0 99 13.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008613210958487426 2 6.207719609720669E-4 3 2.3278948536452506E-4 4 0.0 5 0.0 6 3.1038598048603345E-4 7 1.5519299024301672E-4 8 0.0 9 0.0013191404170656421 10 6.983684560935751E-4 11 7.759649512150836E-5 12 7.759649512150836E-5 13 2.3278948536452506E-4 14 4.655789707290501E-4 15 0.004345403726804468 16 6.207719609720669E-4 17 0.0 18 0.0 19 0.0 20 5.431754658505584E-4 21 0.0 22 2.3278948536452506E-4 23 0.001086350931701117 24 5.431754658505584E-4 25 0.0013191404170656421 26 0.004345403726804468 27 0.0052765616682625685 28 0.003414245785346367 29 0.0023278948536452505 30 0.003259052795103351 31 0.0070612810560572595 32 0.0024830878438882676 33 0.004345403726804468 34 0.0026382808341312842 35 0.0027158773292527924 36 0.006906088065814243 37 0.003103859804860334 38 0.00799243899751536 39 0.0038798247560754176 40 0.0023278948536452505 41 0.0035694387755893842 42 0.0017071228926731836 43 0.0012415439219441338 44 0.0013967369121871502 45 0.0012415439219441338 46 0.0014743334073086586 47 0.0022502983585237423 48 0.0013967369121871502 49 2.3278948536452506E-4 50 0.0010087544365796086 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1288718.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.60314771838931 #Duplication Level Percentage of deduplicated Percentage of total 1 77.05278642289497 40.532191063170465 2 13.496445158207962 14.199109966607073 3 4.140049931867163 6.533389743825479 4 1.772441289428013 3.7294396387981683 5 0.8983738720171365 2.3628646748029403 6 0.5502083913754968 1.736561597245357 7 0.3607379699180105 1.328316690346029 8 0.2509090505821415 1.0558884681322565 9 0.1892285863800982 0.8958617353704867 >10 1.0910264228512248 10.705986631756813 >50 0.10035801367261196 3.6638636354922878 >100 0.08763200116414788 9.45093430771701 >500 0.008169074700969683 2.8320047562746753 >1k 0.001633814940193937 0.9735870904609687 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1351 0.10483286490915779 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1330 0.10320333851160611 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 7.759649512150835E-5 7 0.0 0.0 0.0 0.0 7.759649512150835E-5 8 0.0 0.0 0.0 0.0 7.759649512150835E-5 9 0.0 0.0 0.0 0.0 7.759649512150835E-5 10 0.0 0.0 0.0 0.0 7.759649512150835E-5 11 0.0 0.0 0.0 0.0 7.759649512150835E-5 12 0.0 0.0 0.0 0.0 1.551929902430167E-4 13 0.0 0.0 0.0 0.0 3.103859804860334E-4 14 0.0 0.0 0.0 0.0 3.103859804860334E-4 15 0.0 0.0 0.0 0.0 3.879824756075418E-4 16 0.0 0.0 0.0 0.0 3.879824756075418E-4 17 0.0 0.0 0.0 0.0 4.655789707290501E-4 18 0.0 0.0 0.0 1.551929902430167E-4 4.655789707290501E-4 19 0.0 0.0 0.0 2.3278948536452506E-4 5.431754658505584E-4 20 0.0 0.0 0.0 2.3278948536452506E-4 5.431754658505584E-4 21 0.0 0.0 0.0 2.3278948536452506E-4 6.207719609720668E-4 22 0.0 0.0 0.0 3.879824756075418E-4 6.207719609720668E-4 23 0.0 0.0 0.0 7.759649512150836E-4 6.207719609720668E-4 24 0.0 0.0 0.0 0.0015519299024301671 6.983684560935751E-4 25 0.0 0.0 0.0 0.0019399123780377088 6.983684560935751E-4 26 0.0 0.0 0.0 0.0020951053682807257 8.535614463365919E-4 27 0.0 0.0 0.0 0.002638280834131284 8.535614463365919E-4 28 0.0 0.0 0.0 0.005043772182898043 8.535614463365919E-4 29 0.0 0.0 0.0 0.007604456521907818 8.535614463365919E-4 30 0.0 0.0 0.0 0.013346597160899436 8.535614463365919E-4 31 0.0 0.0 0.0 0.030883405058360323 8.535614463365919E-4 32 0.0 0.0 0.0 0.048342616460699706 9.311579414581002E-4 33 0.0 0.0 0.0 0.06626740683376814 9.311579414581002E-4 34 0.0 0.0 0.0 0.08520095164341616 9.311579414581002E-4 35 0.0 0.0 0.0 0.1077039352286536 9.311579414581002E-4 36 0.0 0.0 0.0 0.14107042813090218 9.311579414581002E-4 37 0.0 0.0 0.0 0.19670711513302366 9.311579414581002E-4 38 0.0 0.0 0.0 0.26980301353748454 9.311579414581002E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 30 0.005744806 29.333694 10 CGGTCGA 50 0.002580344 22.000273 10 GTATAGG 220 0.0 20.001022 1 ATCGGTA 55 0.004483449 20.000246 29 GTATCAA 2710 0.0 19.971502 1 TCGGTCG 70 8.123045E-4 18.857376 9 GTATATC 110 2.797422E-6 17.999523 3 AATAGCG 250 0.0 17.599535 5 TACGCTA 355 0.0 17.352327 9 ATAGCGT 245 0.0 17.060774 6 ACCGTCG 315 0.0 16.761461 8 TAGGACG 105 3.7755122E-5 16.761461 4 GTATTAC 145 1.2486817E-7 16.690508 1 TACCGTC 330 0.0 16.666225 7 ACGCTAT 375 0.0 16.42687 10 CGTCTTA 350 0.0 16.343058 15 GATATAT 310 0.0 16.323416 1 CGTCGTA 330 0.0 16.000198 10 TAATACT 345 0.0 15.9416065 4 AACGCAG 3365 0.0 15.886653 6 >>END_MODULE