##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064005_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1211483 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.204196014306433 32.0 32.0 32.0 32.0 32.0 2 31.417141635499632 32.0 32.0 32.0 32.0 32.0 3 31.495420076055545 32.0 32.0 32.0 32.0 32.0 4 31.57847200497242 32.0 32.0 32.0 32.0 32.0 5 31.54222552029207 32.0 32.0 32.0 32.0 32.0 6 35.11061071430635 36.0 36.0 36.0 36.0 36.0 7 35.1372631724919 36.0 36.0 36.0 36.0 36.0 8 35.08426614323106 36.0 36.0 36.0 36.0 36.0 9 35.19151568779752 36.0 36.0 36.0 36.0 36.0 10 35.043525992523215 36.0 36.0 36.0 36.0 36.0 11 35.192058823772186 36.0 36.0 36.0 36.0 36.0 12 35.1064109030007 36.0 36.0 36.0 36.0 36.0 13 35.14458395206536 36.0 36.0 36.0 36.0 36.0 14 35.08467225706015 36.0 36.0 36.0 36.0 36.0 15 35.06536534148643 36.0 36.0 36.0 36.0 36.0 16 35.07559330176321 36.0 36.0 36.0 36.0 36.0 17 35.04299276176389 36.0 36.0 36.0 36.0 36.0 18 35.031056151840346 36.0 36.0 36.0 36.0 36.0 19 35.03151344261537 36.0 36.0 36.0 36.0 36.0 20 35.01914513038978 36.0 36.0 36.0 36.0 36.0 21 35.02063834160281 36.0 36.0 36.0 36.0 36.0 22 34.99823191906118 36.0 36.0 36.0 36.0 36.0 23 34.955313446412376 36.0 36.0 36.0 36.0 36.0 24 34.9324621146149 36.0 36.0 36.0 36.0 36.0 25 34.898997344576856 36.0 36.0 36.0 32.0 36.0 26 34.845051065512266 36.0 36.0 36.0 32.0 36.0 27 34.832282417499876 36.0 36.0 36.0 32.0 36.0 28 34.81034154007939 36.0 36.0 36.0 32.0 36.0 29 34.77507402084883 36.0 36.0 36.0 32.0 36.0 30 34.7475738413168 36.0 36.0 36.0 32.0 36.0 31 34.73268547722089 36.0 36.0 36.0 32.0 36.0 32 34.6849365612229 36.0 36.0 36.0 32.0 36.0 33 34.64880481195362 36.0 36.0 36.0 32.0 36.0 34 34.62740624507319 36.0 36.0 36.0 32.0 36.0 35 34.57340218558576 36.0 36.0 36.0 32.0 36.0 36 34.54348678437915 36.0 36.0 36.0 32.0 36.0 37 34.527988424105004 36.0 36.0 36.0 32.0 36.0 38 34.47923412874964 36.0 36.0 36.0 32.0 36.0 39 34.44867819028414 36.0 36.0 36.0 32.0 36.0 40 34.43813986659326 36.0 36.0 36.0 32.0 36.0 41 34.4071868940794 36.0 36.0 36.0 32.0 36.0 42 34.340489301129274 36.0 36.0 36.0 32.0 36.0 43 34.316104311822784 36.0 36.0 36.0 32.0 36.0 44 34.23769215085973 36.0 36.0 36.0 32.0 36.0 45 34.17675691693569 36.0 36.0 36.0 32.0 36.0 46 34.12343796817619 36.0 36.0 36.0 32.0 36.0 47 34.05638791464676 36.0 36.0 36.0 32.0 36.0 48 33.994840208240646 36.0 36.0 36.0 32.0 36.0 49 33.95975015745165 36.0 36.0 36.0 32.0 36.0 50 33.39272032707021 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 2.0 19 3.0 20 15.0 21 52.0 22 149.0 23 479.0 24 1132.0 25 2685.0 26 5340.0 27 9405.0 28 15454.0 29 22705.0 30 31990.0 31 44108.0 32 62136.0 33 98425.0 34 199927.0 35 717474.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.91907007691298 18.297975266000698 12.140396526574479 25.642558130511844 2 15.194828135550129 20.889359938851552 38.69182931922825 25.223982606370072 3 18.054393063679242 25.754326533374932 29.138292234774383 27.05298816817144 4 11.559551392797092 16.47872896276712 36.94719612243837 35.01452352199742 5 13.099399661406721 38.33598985705949 33.814754313514925 14.749856168018866 6 32.789812155845354 36.86770676930671 17.352121325681004 12.99035974916693 7 29.13538954767797 31.23628745619002 21.26742287545337 18.36090012067864 8 27.67096195324243 33.92222589999199 19.473818452260577 18.932993694504997 9 27.714979561918472 13.880148316417163 18.81929632246604 39.585575799198324 10 15.577604067785417 27.73828489355906 32.22498287204801 24.45912816660751 11 36.518412985087686 21.172250186135656 23.369393849846716 18.93994297892994 12 24.863122079504343 24.245035621689485 29.82539552828315 21.06644677052302 13 30.070021849326316 20.189702008866846 25.597389636964408 24.14288650484243 14 23.167365536368738 20.44301185327038 26.536302704130488 29.853319906230396 15 24.431799889880658 28.67040390023881 23.252680960168 23.645115249712525 16 24.238034391219937 26.28323229921946 25.606865036913774 23.87186827264683 17 22.663050162486805 26.753491382049933 26.44288033756974 24.140578117893526 18 23.31839564432507 25.463710825711093 28.299588023544814 22.918305506419024 19 24.880146597550105 25.01130848218708 26.856819757651795 23.25172516261102 20 25.370209562550144 24.647207208397028 26.55397217939109 23.428611049661736 21 26.172467958691954 24.339507859375658 25.590866731105592 23.897157450826796 22 25.100166572842188 25.287210210304405 26.06146851542161 23.551154701431802 23 23.64885779731319 25.288016673889267 26.810788501619925 24.252337027177614 24 24.1981881590623 25.41761076373842 26.869972554117915 23.514228523081368 25 24.123434431649056 25.267507579690967 26.88596661386541 23.723091374794567 26 23.486069195057684 26.229140113718163 27.272216975836542 23.012573715387614 27 23.96650825530397 25.70944598948492 26.61046736717674 23.71357838803437 28 23.30543242283912 25.909132182627143 26.65544026481101 24.129995129722726 29 23.434843046810254 25.532339918312363 26.770696788295623 24.262120246581766 30 23.227348745371188 25.936121984359033 27.031022738341505 23.805506531928277 31 24.38194864073278 25.332346036117247 26.144719941092365 24.140985382057607 32 23.547110565207916 26.124852242935724 26.121880592481062 24.20615659937529 33 23.279881264094936 25.624964917436284 26.90023674539469 24.19491707307409 34 23.98433275963828 25.836831222218095 26.92850273846522 23.2503332796784 35 24.332431658286893 25.97657846100001 26.59724016446421 23.093749716248887 36 23.258325030110363 26.34984814801668 26.547391934963272 23.844434886909692 37 23.9402589340844 26.254387384144994 26.067335409120474 23.73801827265013 38 23.622412547724693 26.31629346816634 26.2784851924466 23.782808791662365 39 24.200920403656852 25.810842602719937 26.127577027054915 23.8606599665683 40 24.811012221677423 25.932722166916776 26.41932751883274 22.836938092573057 41 23.73785025321001 25.9736100276942 27.068913570157953 23.219626148937838 42 24.464405699578524 26.875384866829886 26.077173125275493 22.583036308316096 43 23.452145209072967 26.15027895931131 26.530974430174325 23.866601401441393 44 23.33906747076663 26.60546217863104 26.018813693912623 24.036656656689708 45 23.265943905978375 26.794148577013306 26.02384218789467 23.916065329113653 46 23.49812252417936 25.929389739877358 25.986675658519793 24.585812077423487 47 24.203873181015616 25.965963354929883 26.1626683197698 23.6674951442847 48 24.363265659888317 26.45760676211663 25.27043926518113 23.90868831281393 49 23.73967579989335 26.620463996751063 25.516767177834605 24.123093025520976 50 23.621118458469084 27.102836138875798 25.298913469657965 23.97713193299716 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 36.0 1 33.0 2 30.0 3 92.5 4 155.0 5 199.5 6 244.0 7 260.0 8 276.0 9 400.0 10 524.0 11 768.5 12 1013.0 13 1921.0 14 2829.0 15 4042.0 16 5255.0 17 6069.5 18 6884.0 19 7269.5 20 7655.0 21 7951.0 22 8247.0 23 8979.0 24 9711.0 25 9840.5 26 9970.0 27 12557.5 28 15145.0 29 17862.5 30 20580.0 31 24112.0 32 27644.0 33 32869.5 34 38095.0 35 43690.5 36 49286.0 37 53687.0 38 58088.0 39 59132.5 40 60177.0 41 62543.5 42 64910.0 43 65888.0 44 66866.0 45 72401.5 46 77937.0 47 81709.5 48 85482.0 49 86972.5 50 88463.0 51 85510.0 52 82557.0 53 80065.0 54 77573.0 55 77437.5 56 77302.0 57 73487.0 58 69672.0 59 62484.5 60 55297.0 61 48422.0 62 41547.0 63 36031.0 64 30515.0 65 25788.0 66 21061.0 67 18188.5 68 15316.0 69 14259.0 70 13202.0 71 10387.5 72 7573.0 73 6408.0 74 5243.0 75 4134.0 76 3025.0 77 2688.5 78 2352.0 79 1958.0 80 1564.0 81 1270.5 82 977.0 83 801.5 84 626.0 85 446.5 86 267.0 87 187.0 88 107.0 89 82.5 90 58.0 91 46.5 92 35.0 93 36.0 94 37.0 95 33.5 96 30.0 97 27.0 98 24.0 99 22.5 100 21.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009409954576333304 2 4.127173059795309E-4 3 4.127173059795309E-4 4 0.0 5 0.0 6 0.0 7 8.254346119590618E-5 8 0.0 9 0.0015683257627222174 10 0.0010730649955467803 11 8.254346119590618E-5 12 1.6508692239181237E-4 13 3.3017384478362474E-4 14 2.4763038358771854E-4 15 0.005778042283713433 16 9.079780731549679E-4 17 0.0 18 4.952607671754371E-4 19 2.4763038358771854E-4 20 5.778042283713432E-4 21 0.0 22 8.254346119590618E-5 23 6.603476895672495E-4 24 6.603476895672495E-4 25 0.0018159561463099358 26 0.005530411900125713 27 0.006603476895672494 28 0.004374803443383027 29 0.0032191949866403405 30 0.004044629598599403 31 0.007841628813611086 32 0.0028890211418567163 33 0.00453989036577484 34 0.0031366515254444348 35 0.00280647768066081 36 0.008749606886766055 37 0.00453989036577484 38 0.008914693809157867 39 0.004787520749362558 40 0.002393760374681279 41 0.0031366515254444348 42 0.0020635865298976545 43 0.001320695379134499 44 0.0020635865298976545 45 0.001403238840330405 46 0.001320695379134499 47 0.0019810430687017483 48 0.002311216913485373 49 7.428911507631556E-4 50 9.905215343508742E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1211483.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.30693320352134 #Duplication Level Percentage of deduplicated Percentage of total 1 73.14581541179523 40.4547072709726 2 15.457460756457875 17.09809499106936 3 5.515685929705877 9.151670198575363 4 2.4064458949206826 5.323725694730652 5 1.1991680253538184 3.316115293902111 6 0.6588474463291505 2.1863299023262157 7 0.40018068501532794 1.549293649083751 8 0.2575220206674429 1.1394202556392083 9 0.16615448709707967 0.8270545607409179 >10 0.6540786346006489 6.336751651354476 >50 0.06635527884150312 2.5950073131653344 >100 0.06583673695554393 7.3463181728894416 >500 0.005548874735223899 2.0786490471075303 >1k 8.998175246309025E-4 0.5968619984432301 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1623 0.1339680375209557 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1333 0.11003043377414293 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4763038358771854E-4 2 0.0 0.0 0.0 0.0 2.4763038358771854E-4 3 0.0 0.0 0.0 0.0 2.4763038358771854E-4 4 0.0 0.0 0.0 0.0 2.4763038358771854E-4 5 0.0 0.0 0.0 0.0 3.301738447836247E-4 6 0.0 0.0 0.0 0.0 4.952607671754371E-4 7 0.0 0.0 0.0 0.0 5.778042283713432E-4 8 0.0 0.0 0.0 0.0 5.778042283713432E-4 9 0.0 0.0 0.0 0.0 5.778042283713432E-4 10 0.0 0.0 0.0 0.0 5.778042283713432E-4 11 0.0 0.0 0.0 0.0 5.778042283713432E-4 12 0.0 0.0 0.0 8.254346119590617E-5 9.905215343508742E-4 13 0.0 0.0 0.0 8.254346119590617E-5 0.0010730649955467803 14 0.0 0.0 0.0 8.254346119590617E-5 0.0010730649955467803 15 0.0 0.0 0.0 8.254346119590617E-5 0.0013206953791344987 16 0.0 0.0 0.0 1.6508692239181234E-4 0.0014032388403304049 17 0.0 0.0 0.0 1.6508692239181234E-4 0.0014032388403304049 18 0.0 0.0 0.0 1.6508692239181234E-4 0.0014857823015263112 19 0.0 0.0 0.0 2.4763038358771854E-4 0.0014857823015263112 20 0.0 0.0 0.0 3.301738447836247E-4 0.0017334126851140297 21 0.0 0.0 0.0 4.952607671754371E-4 0.001898499607505842 22 0.0 0.0 0.0 9.905215343508742E-4 0.001898499607505842 23 0.0 0.0 0.0 0.0029715646030526225 0.001898499607505842 24 8.254346119590617E-5 0.0 0.0 0.005447868438929807 0.001898499607505842 25 8.254346119590617E-5 0.0 0.0 0.006355846512084776 0.001898499607505842 26 8.254346119590617E-5 0.0 0.0 0.007511454968827462 0.0019810430687017483 27 8.254346119590617E-5 0.0 0.0 0.00883215034796196 0.0019810430687017483 28 8.254346119590617E-5 0.0 0.0 0.01229897571819002 0.0019810430687017483 29 8.254346119590617E-5 0.0 0.0 0.018984996075058422 0.0019810430687017483 30 8.254346119590617E-5 0.0 0.0 0.031861776021619784 0.0019810430687017483 31 8.254346119590617E-5 0.0 0.0 0.061990139358125536 0.0019810430687017483 32 1.6508692239181234E-4 0.0 0.0 0.09071526385430088 0.0020635865298976545 33 1.6508692239181234E-4 0.0 0.0 0.1203483664236312 0.0020635865298976545 34 1.6508692239181234E-4 0.0 0.0 0.15031164283774515 0.0021461299910935606 35 1.6508692239181234E-4 0.0 0.0 0.1884467219102538 0.0021461299910935606 36 1.6508692239181234E-4 0.0 0.0 0.23978875477410744 0.0021461299910935606 37 1.6508692239181234E-4 0.0 0.0 0.3195257382893528 0.0021461299910935606 38 1.6508692239181234E-4 0.0 0.0 0.4224574344006478 0.002311216913485373 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCTT 30 1.3018624E-4 36.663193 5 GGCGTTA 205 0.0 21.462267 42 TAGGACC 855 0.0 20.84013 4 GTAGGAC 910 0.0 19.338827 3 TAGGACG 645 0.0 18.757912 4 TGTAGGA 950 0.0 18.524563 2 GATTTCG 345 0.0 18.491764 41 ATACACT 490 0.0 17.957481 4 TTAGGAC 530 0.0 17.847366 3 CGCGGTT 395 0.0 17.821833 10 ATTTCGT 405 0.0 17.381786 42 CTGTAGG 975 0.0 17.374147 1 CTTACAC 180 2.8558134E-10 17.10949 3 AGGACGT 670 0.0 17.073008 5 AATCACG 485 0.0 16.784687 34 ATCACGG 485 0.0 16.784687 35 GCGAGAA 605 0.0 16.72707 20 TATGGCG 965 0.0 16.641598 16 GTCCTAA 450 0.0 16.622019 1 ATACCGT 225 1.8189894E-12 16.620647 6 >>END_MODULE