##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064004_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2956293 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.240976452604663 32.0 32.0 32.0 32.0 32.0 2 30.761102840618303 32.0 32.0 32.0 32.0 32.0 3 30.774725982844053 32.0 32.0 32.0 32.0 32.0 4 30.823464724234032 32.0 32.0 32.0 32.0 32.0 5 30.678929321281753 32.0 32.0 32.0 32.0 32.0 6 34.35765500916181 36.0 36.0 36.0 32.0 36.0 7 34.29866829843997 36.0 36.0 36.0 32.0 36.0 8 34.24503017799657 36.0 36.0 36.0 32.0 36.0 9 34.428189628024015 36.0 36.0 36.0 32.0 36.0 10 34.05133997205284 36.0 36.0 36.0 32.0 36.0 11 34.402760484160396 36.0 36.0 36.0 32.0 36.0 12 34.17170896118889 36.0 36.0 36.0 32.0 36.0 13 34.28484152281252 36.0 36.0 36.0 32.0 36.0 14 34.15922914271353 36.0 36.0 36.0 32.0 36.0 15 34.076372335218466 36.0 36.0 36.0 32.0 36.0 16 34.08297925814525 36.0 36.0 36.0 32.0 36.0 17 33.993948502398105 36.0 36.0 36.0 32.0 36.0 18 33.99586373881073 36.0 36.0 36.0 32.0 36.0 19 34.01722089116336 36.0 36.0 36.0 32.0 36.0 20 34.00275649267512 36.0 36.0 36.0 32.0 36.0 21 33.98735341862258 36.0 36.0 36.0 32.0 36.0 22 33.97130122081945 36.0 36.0 36.0 32.0 36.0 23 33.900371850828044 36.0 36.0 36.0 32.0 36.0 24 33.87992191572351 36.0 36.0 36.0 32.0 36.0 25 33.46230126716127 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 11.0 4 23.0 5 34.0 6 111.0 7 49.0 8 183.0 9 198.0 10 264.0 11 101.0 12 193.0 13 162.0 14 247.0 15 449.0 16 763.0 17 1025.0 18 1421.0 19 2015.0 20 3169.0 21 4617.0 22 7441.0 23 11381.0 24 16966.0 25 25001.0 26 35422.0 27 47452.0 28 63549.0 29 85837.0 30 112900.0 31 152454.0 32 215935.0 33 302766.0 34 629761.0 35 1234393.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.24534256388842 17.26756303396858 11.508392403268504 25.97870199887449 2 16.98003936243411 19.512617561274617 36.89274244126926 26.61460063502201 3 18.57980743828239 23.42818445143454 28.66722570881256 29.32478240147051 4 12.714022198264855 15.444406745604205 35.63003839080001 36.21153266533093 5 14.981615501638517 36.21463703090267 33.34094491145705 15.462802556001765 6 34.563657806011946 35.29141916848731 16.69720431649906 13.447718709001682 7 30.696620211334487 30.316460385864254 20.578231350057973 18.408688052743287 8 28.542994681286643 32.37413991349562 19.180360486812177 19.902504918405565 9 27.37307142100513 14.126290133005915 18.503731685500796 39.996906760488166 10 16.239489519727364 26.346033627444577 31.036763284844298 26.37771356798376 11 37.234027430864394 20.973909405854137 22.389688312708063 19.402374850573405 12 24.879652527347698 23.564478557468586 28.371032392103608 23.18483652308011 13 29.312649463581238 19.274315704317242 25.238270123531176 26.174764708570347 14 23.89384185545221 19.622176171555807 24.8640764407965 31.619905532195485 15 25.313854194837194 27.06634710644219 21.938265215806386 25.681533482914237 16 26.11801971779306 25.62785051955024 23.23596970638591 25.018160056270787 17 24.35152136717421 25.823014031542623 24.77641089691191 25.049053704371254 18 25.174554587472286 24.80071578806255 25.63526021286096 24.389469411604203 19 25.78540899221615 24.798599625059158 25.039724907974296 24.376266474750395 20 26.02194088027575 24.11980210823653 24.464833046597455 25.39342396489026 21 27.22012433840493 23.990744862535482 24.096566222133458 24.692564576926138 22 26.332129748804483 23.888455947519834 24.643647125175274 25.135767178500412 23 24.728811551026627 23.931479255886384 25.25575096907426 26.083958224012726 24 25.03595115517629 24.803995114434354 24.849763440044846 25.310290290344504 25 25.103640466600453 24.247671432469343 24.972528421150983 25.676159679779225 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 131.0 1 131.0 2 389.5 3 648.0 4 648.0 5 648.0 6 2047.0 7 3446.0 8 3446.0 9 3446.0 10 3835.5 11 4225.0 12 4225.0 13 4225.0 14 5650.0 15 7075.0 16 7075.0 17 7075.0 18 12207.0 19 17339.0 20 17339.0 21 17339.0 22 28294.5 23 39250.0 24 39250.0 25 39250.0 26 59013.0 27 78776.0 28 78776.0 29 78776.0 30 98181.5 31 117587.0 32 117587.0 33 117587.0 34 148699.5 35 179812.0 36 179812.0 37 179812.0 38 207732.5 39 235653.0 40 235653.0 41 235653.0 42 271063.5 43 306474.0 44 306474.0 45 306474.0 46 343480.0 47 380486.0 48 380486.0 49 380486.0 50 391600.0 51 402714.0 52 402714.0 53 402714.0 54 377143.0 55 351572.0 56 351572.0 57 351572.0 58 324448.5 59 297325.0 60 297325.0 61 297325.0 62 262497.0 63 227669.0 64 227669.0 65 227669.0 66 187068.0 67 146467.0 68 146467.0 69 146467.0 70 110729.0 71 74991.0 72 74991.0 73 74991.0 74 57835.5 75 40680.0 76 40680.0 77 40680.0 78 32878.5 79 25077.0 80 25077.0 81 25077.0 82 17202.0 83 9327.0 84 9327.0 85 9327.0 86 7081.0 87 4835.0 88 4835.0 89 4835.0 90 3514.0 91 2193.0 92 2193.0 93 2193.0 94 1523.0 95 853.0 96 853.0 97 853.0 98 1270.5 99 1688.0 100 1688.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03991485282412806 2 0.005919575630696957 3 0.0015560027372117716 4 0.003923832989490555 5 0.009133059544503877 6 0.012820109508766555 7 0.023475345644021078 8 0.036092498274020876 9 0.04945382612616543 10 0.05892514713528057 11 0.056320533857773906 12 0.06531828881643328 13 0.06690811770010618 14 0.06964803556345735 15 0.06142828197340385 16 0.06788907594747882 17 0.06352550305399363 18 0.07935613959780036 19 0.07533082816892642 20 0.07966057491595048 21 0.07637943870922131 22 0.07911935657257248 23 0.08263727580452952 24 0.0772927446636717 25 0.07884874740088348 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2956293.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.18568177806257 #Duplication Level Percentage of deduplicated Percentage of total 1 76.02618235349993 35.87347247333204 2 13.370581871014576 12.618000427064525 3 4.297378847255059 6.083242522990639 4 1.9310823656101535 3.644777519636359 5 1.0600845018935208 2.501040498210182 6 0.6610539485194417 1.871536875178208 7 0.47585274841814124 1.5717405452052418 8 0.33838641477768033 1.277359494857529 9 0.2539517804011975 1.0784599107285 >10 1.3893741212323838 11.746451848946899 >50 0.09792649156898177 3.209472739355275 >100 0.07697068774147303 7.785748759939144 >500 0.01339571245087659 4.40217192242562 >1k 0.007706135657185571 6.142650826053286 >5k 7.201995941294928E-5 0.1938736360764456 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5705 0.1929781655607208 No Hit TATCAACGCAGAGTACTTTTTTTTT 3989 0.13493249823342948 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 3258 0.11020558517034677 No Hit GATTAAGAGGGACGGCCGGGGGCAT 3210 0.10858193014021277 No Hit GTATCTGATCGTCTTCGAACCTCCG 3166 0.10709357969592324 No Hit GAATAGGACCGCGGTTCTATTTTGT 3083 0.10428600953964982 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2975 0.10063278572184828 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.0147843938337641E-4 0.0 0.0 0.0 6 0.0 1.0147843938337641E-4 0.0 0.0 3.382614646112547E-5 7 0.0 1.0147843938337641E-4 0.0 0.0 3.382614646112547E-5 8 0.0 1.0147843938337641E-4 0.0 0.0 3.382614646112547E-5 9 0.0 1.0147843938337641E-4 0.0 0.0 3.382614646112547E-5 10 0.0 1.0147843938337641E-4 0.0 3.382614646112547E-5 3.382614646112547E-5 11 0.0 1.0147843938337641E-4 0.0 3.382614646112547E-5 3.382614646112547E-5 12 0.0 1.0147843938337641E-4 0.0 3.382614646112547E-5 2.0295687876675282E-4 13 0.0 1.0147843938337641E-4 0.0 3.382614646112547E-5 2.0295687876675282E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 265 0.0 13.261209 1 CGAACGA 240 0.0 13.065352 16 CGTCGTA 490 0.0 12.990652 10 GGTATCA 1555 0.0 12.338099 1 CGTTATT 270 0.0 12.307083 2 CCGTCGT 520 0.0 12.240984 9 GTATCAA 3905 0.0 11.990937 1 TATACCG 120 1.0055373E-8 11.872767 5 CCGACCA 520 0.0 11.69288 9 CGGCGTC 345 0.0 11.567156 14 ATACCGT 635 0.0 11.518689 6 ACCGTCG 590 0.0 11.432764 8 CGTCTTA 235 0.0 11.321429 15 CGACCAT 565 0.0 11.26623 10 CGCATCG 470 0.0 11.118883 13 ATACCGA 60 0.005881564 11.082376 6 CGTCAAT 485 0.0 10.971282 19 TACCGTC 625 0.0 10.944351 7 CGGTCCA 620 0.0 10.879749 10 GTCGTAG 565 0.0 10.762319 11 >>END_MODULE