##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064003_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1103288 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19274840295553 32.0 32.0 32.0 32.0 32.0 2 30.72419803351437 32.0 32.0 32.0 32.0 32.0 3 30.743791285684246 32.0 32.0 32.0 32.0 32.0 4 30.779574326920986 32.0 32.0 32.0 32.0 32.0 5 30.66317226327124 32.0 32.0 32.0 32.0 32.0 6 34.315427159544925 36.0 36.0 36.0 32.0 36.0 7 34.254892648157146 36.0 36.0 36.0 32.0 36.0 8 34.20917294487024 36.0 36.0 36.0 32.0 36.0 9 34.37253645467004 36.0 36.0 36.0 32.0 36.0 10 34.01695930708935 36.0 36.0 36.0 32.0 36.0 11 34.34920800371254 36.0 36.0 36.0 32.0 36.0 12 34.13065219598147 36.0 36.0 36.0 32.0 36.0 13 34.228357418915095 36.0 36.0 36.0 32.0 36.0 14 34.10663308220519 36.0 36.0 36.0 32.0 36.0 15 34.039835473602544 36.0 36.0 36.0 32.0 36.0 16 34.041887521662524 36.0 36.0 36.0 32.0 36.0 17 33.971178876231775 36.0 36.0 36.0 32.0 36.0 18 33.95624986404275 36.0 36.0 36.0 32.0 36.0 19 33.97596003944573 36.0 36.0 36.0 32.0 36.0 20 33.95537611213029 36.0 36.0 36.0 32.0 36.0 21 33.945677828454585 36.0 36.0 36.0 32.0 36.0 22 33.91902748874274 36.0 36.0 36.0 32.0 36.0 23 33.85196702946103 36.0 36.0 36.0 32.0 36.0 24 33.861648998267 36.0 36.0 36.0 32.0 36.0 25 33.42124087273677 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 5.0 5 11.0 6 40.0 7 16.0 8 64.0 9 71.0 10 97.0 11 29.0 12 80.0 13 59.0 14 92.0 15 155.0 16 293.0 17 426.0 18 538.0 19 817.0 20 1238.0 21 1881.0 22 3029.0 23 4791.0 24 6967.0 25 10024.0 26 14194.0 27 18327.0 28 25042.0 29 32743.0 30 42896.0 31 57155.0 32 79588.0 33 109928.0 34 228425.0 35 464264.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.25603106066514 17.180113050085506 11.483360746558537 26.080495142690825 2 16.802419069753107 19.530489451920445 37.68058272315755 25.986508755168895 3 18.927867681581613 23.548008752100557 28.525448708303802 28.998674858014027 4 12.676466136176792 15.47844246626126 35.66476351385035 36.18032788371159 5 14.873073210085252 36.42801136698407 33.36155439428206 15.337361028648608 6 34.235087649322935 35.34183145295364 16.802399682362985 13.620681215360433 7 30.458606140495615 30.23966536057688 20.610350686014446 18.691377812913064 8 28.11683401366219 32.91809396698516 19.299790189119935 19.665281830232715 9 27.700708944599306 14.199204545660638 18.355389992074475 39.74469651766558 10 16.237388508749255 26.362222433830762 31.269061773067975 26.131327284352 11 37.223246981494476 20.978817409662483 22.474240453868603 19.323695154974434 12 25.074708896049657 23.4800424083518 28.591083181497044 22.854165514101503 13 29.714431861158396 19.36135112265545 25.015758079246588 25.908458936939567 14 23.797737461759695 19.712271453798273 24.799218550890785 31.690772533551247 15 25.29352015598785 27.21344034825194 22.012605994649252 25.480433501110962 16 25.952257865571067 25.507759003800146 23.675799707960348 24.864183422668447 17 24.205247921292063 25.806270224776167 24.995193214632945 24.99328863929883 18 24.95285590278565 24.703053413649883 26.095017465312015 24.249073218252455 19 25.977694169209393 24.661403438755112 25.024308566411367 24.33659382562413 20 26.222470157106052 24.215013969014187 24.608595479119046 24.95392039476071 21 27.072467659218596 23.84083854734516 24.10995956381896 24.976734229617282 22 26.353828598795793 24.14051771211085 24.59014609067309 24.91550759842027 23 24.797649532528013 24.153974124176017 25.10887421207363 25.93950213122234 24 25.12068224243117 24.670878980337093 25.01138340580617 25.197055371425563 25 25.124970860541502 24.382810395326075 25.091772286810276 25.400446457322147 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 82.0 1 82.0 2 200.0 3 318.0 4 318.0 5 318.0 6 840.0 7 1362.0 8 1362.0 9 1362.0 10 1530.0 11 1698.0 12 1698.0 13 1698.0 14 2175.5 15 2653.0 16 2653.0 17 2653.0 18 4482.0 19 6311.0 20 6311.0 21 6311.0 22 10529.5 23 14748.0 24 14748.0 25 14748.0 26 22249.5 27 29751.0 28 29751.0 29 29751.0 30 37671.5 31 45592.0 32 45592.0 33 45592.0 34 56804.0 35 68016.0 36 68016.0 37 68016.0 38 78104.5 39 88193.0 40 88193.0 41 88193.0 42 101794.5 43 115396.0 44 115396.0 45 115396.0 46 128617.0 47 141838.0 48 141838.0 49 141838.0 50 145988.0 51 150138.0 52 150138.0 53 150138.0 54 140934.5 55 131731.0 56 131731.0 57 131731.0 58 121079.5 59 110428.0 60 110428.0 61 110428.0 62 96816.0 63 83204.0 64 83204.0 65 83204.0 66 68759.0 67 54314.0 68 54314.0 69 54314.0 70 40806.0 71 27298.0 72 27298.0 73 27298.0 74 21010.5 75 14723.0 76 14723.0 77 14723.0 78 11659.5 79 8596.0 80 8596.0 81 8596.0 82 5959.5 83 3323.0 84 3323.0 85 3323.0 86 2569.5 87 1816.0 88 1816.0 89 1816.0 90 1310.0 91 804.0 92 804.0 93 804.0 94 571.0 95 338.0 96 338.0 97 338.0 98 477.5 99 617.0 100 617.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03752420039010666 2 0.004894460920448695 3 9.063816519349436E-4 4 0.0028097831209983252 5 0.008429349362994975 6 0.012870619457476197 7 0.022659541298373588 8 0.035348884425462794 9 0.047313122231004055 10 0.056467576915546984 11 0.05347651746416167 12 0.061180761505608694 13 0.061543314166382666 14 0.06535011710450943 15 0.0578271493934494 16 0.06326543930505907 17 0.06163395233157616 18 0.07405138096308489 19 0.0721479794940215 20 0.07686116408408321 21 0.07341691380673042 22 0.07450457178905236 23 0.07876456555314659 24 0.07305436114595644 25 0.0753203152757938 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1103288.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.8749672366585 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91949433275703 44.65499127413114 2 11.87258210172665 13.267602718970295 3 3.3640272638273405 5.638947394487357 4 1.4917686083425126 3.3341008846325417 5 0.8437914752577352 2.3573410517298847 6 0.5384619986887559 1.8051927920951931 7 0.3642630279953864 1.4247229328337763 8 0.24803545855367395 1.108717849617288 9 0.19811838467773207 0.9962872427563185 >10 0.998624573510243 9.957154829749863 >50 0.07301578300125372 2.8468153108212544 >100 0.07983363013676421 9.14516546895378 >500 0.007005807052560628 2.7421474402483077 >1k 9.775544724503202E-4 0.7208128089730462 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2332 0.21136820123122882 No Hit TATCAACGCAGAGTACTTTTTTTTT 1432 0.12979385255708392 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 9.063816519349435E-5 0.0 6 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349435E-5 7 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349435E-5 8 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349435E-5 9 0.0 0.0 0.0 9.063816519349435E-5 1.812763303869887E-4 10 0.0 0.0 0.0 9.063816519349435E-5 1.812763303869887E-4 11 0.0 0.0 0.0 9.063816519349435E-5 2.7191449558048306E-4 12 0.0 0.0 0.0 9.063816519349435E-5 5.438289911609661E-4 13 0.0 0.0 0.0 9.063816519349435E-5 5.438289911609661E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAT 60 2.5739258E-5 14.245885 1 ATAGGAG 85 2.7061105E-7 13.407891 3 GTATAGG 85 2.7061105E-7 13.407891 1 ATAGGGG 50 0.0015023315 13.29616 3 TAAATGT 65 5.4505414E-5 13.1536255 4 GACGTGA 95 7.3805495E-8 12.9997835 7 GGGTAGG 275 0.0 12.432773 1 GTATCAA 1645 0.0 12.4128275 1 TTAGACA 85 3.941115E-6 12.293912 4 AACCGTG 55 0.003067858 12.090706 7 TTATACA 55 0.003067858 12.090706 4 AACAGTC 110 3.8098733E-8 12.090706 7 AGATCGT 55 0.0030689004 12.090158 6 TAAGGTT 55 0.0030689004 12.090158 5 CGGACAT 120 1.000808E-8 11.874263 5 CTCGTAG 105 2.7158967E-7 11.762241 10 AAGATCG 90 7.460103E-6 11.610391 5 GTCCTAA 205 0.0 11.58202 1 CTTACAC 140 6.82121E-10 11.532383 3 GGTATCA 630 0.0 11.457008 1 >>END_MODULE