##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064003_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1103288 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.328989348202825 32.0 32.0 32.0 32.0 32.0 2 31.390670432380304 32.0 32.0 32.0 32.0 32.0 3 31.473789255389345 32.0 32.0 32.0 32.0 32.0 4 31.55263811443612 32.0 32.0 32.0 32.0 32.0 5 31.504509248718378 32.0 32.0 32.0 32.0 32.0 6 35.08035979726055 36.0 36.0 36.0 36.0 36.0 7 35.099771773100045 36.0 36.0 36.0 36.0 36.0 8 35.04192468331025 36.0 36.0 36.0 36.0 36.0 9 35.166891147189126 36.0 36.0 36.0 36.0 36.0 10 35.00635826728833 36.0 36.0 36.0 36.0 36.0 11 35.15576168688502 36.0 36.0 36.0 36.0 36.0 12 35.05903082422722 36.0 36.0 36.0 36.0 36.0 13 35.10723220047712 36.0 36.0 36.0 36.0 36.0 14 35.04904159204124 36.0 36.0 36.0 36.0 36.0 15 35.01861435998579 36.0 36.0 36.0 36.0 36.0 16 35.02198338058603 36.0 36.0 36.0 36.0 36.0 17 34.99118181290832 36.0 36.0 36.0 36.0 36.0 18 34.99192413948126 36.0 36.0 36.0 36.0 36.0 19 34.99394537056507 36.0 36.0 36.0 36.0 36.0 20 34.982067239016466 36.0 36.0 36.0 36.0 36.0 21 34.96771377917643 36.0 36.0 36.0 36.0 36.0 22 34.96143164794687 36.0 36.0 36.0 36.0 36.0 23 34.90573177629051 36.0 36.0 36.0 32.0 36.0 24 34.87266153533801 36.0 36.0 36.0 32.0 36.0 25 34.85176490635265 36.0 36.0 36.0 32.0 36.0 26 34.78425125624497 36.0 36.0 36.0 32.0 36.0 27 34.77978551384589 36.0 36.0 36.0 32.0 36.0 28 34.75277443423657 36.0 36.0 36.0 32.0 36.0 29 34.72542527427109 36.0 36.0 36.0 32.0 36.0 30 34.71082437224007 36.0 36.0 36.0 32.0 36.0 31 34.70712452233687 36.0 36.0 36.0 32.0 36.0 32 34.658439138284834 36.0 36.0 36.0 32.0 36.0 33 34.647951396190294 36.0 36.0 36.0 32.0 36.0 34 34.63978580388802 36.0 36.0 36.0 32.0 36.0 35 34.59828530719087 36.0 36.0 36.0 32.0 36.0 36 34.572820514679755 36.0 36.0 36.0 32.0 36.0 37 34.55521767661753 36.0 36.0 36.0 32.0 36.0 38 34.520609306001695 36.0 36.0 36.0 32.0 36.0 39 34.520919288526656 36.0 36.0 36.0 32.0 36.0 40 34.50338442908833 36.0 36.0 36.0 32.0 36.0 41 34.48655110904859 36.0 36.0 36.0 32.0 36.0 42 34.41469045253823 36.0 36.0 36.0 32.0 36.0 43 34.4240216516449 36.0 36.0 36.0 32.0 36.0 44 34.3438966072322 36.0 36.0 36.0 32.0 36.0 45 34.32443478040185 36.0 36.0 36.0 32.0 36.0 46 34.29850863962991 36.0 36.0 36.0 32.0 36.0 47 34.267116111115136 36.0 36.0 36.0 32.0 36.0 48 34.22583133325116 36.0 36.0 36.0 32.0 36.0 49 34.20813604426043 36.0 36.0 36.0 32.0 36.0 50 33.595963157398614 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 17.0 21 36.0 22 118.0 23 325.0 24 869.0 25 2041.0 26 4138.0 27 7490.0 28 12775.0 29 19588.0 30 28409.0 31 40007.0 32 58264.0 33 93755.0 34 192513.0 35 642942.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38007077695108 18.137409534583533 11.956663620937215 26.525856067528174 2 15.938779135743832 20.318068602463192 37.25495883199611 26.488193429796862 3 18.11392171009459 24.144010064498353 28.832558072082982 28.909510153324074 4 12.38226102341365 16.129242772512708 35.921083162329325 35.56741304174431 5 14.413371667234664 36.79746358158523 33.20175693019411 15.587407820985998 6 34.322710228616856 35.686181383447824 16.62622690197564 13.364881485959682 7 30.319372638875798 30.421249936553284 20.574500946262443 18.684876478308475 8 28.040120113805383 33.10634494922899 19.123945084098697 19.729589852866933 9 27.642422330748285 13.90015843838487 18.33335146129499 40.12406776957185 10 16.113073948723713 26.564474230429685 31.22105217361354 26.101399647233066 11 37.3216240908992 20.854391600379955 22.58431162126299 19.239672687457855 12 25.0504175250864 23.423914176456353 28.600627035395142 22.925041263062106 13 29.775125081574938 19.362174606627512 25.076589804945254 25.786110506852296 14 23.767864782359638 19.60793555263902 24.869390403956174 31.754809261045168 15 25.341767929559822 27.234022881818365 21.921822568920103 25.50238661970171 16 25.918288731277332 25.490380911377493 23.656749223901567 24.93458113344361 17 24.23292920796746 25.798069044528717 24.943532423084452 25.02546932441937 18 24.924090123830535 24.651539678885364 26.069944039692484 24.35442615759162 19 25.8596123586951 24.544180667241918 25.198769496269335 24.39743747779365 20 26.226610736673422 24.122981933935414 24.705334256637457 24.945073072753708 21 27.168971293080318 23.86910761288077 24.12398213340488 24.83793896063403 22 26.24165222498568 24.20963519951273 24.685213652282993 24.863498923218597 23 24.709501520924952 23.928101399831046 25.227594908255053 26.134802170988948 24 25.114045988200672 24.54229785105 25.081597378007274 25.262058782742052 25 25.1771323636713 24.20357283024751 25.251275525233602 25.368019280847587 26 24.84688018085225 25.096966065729347 25.475947249009945 24.580206504408455 27 25.403997737540156 24.60687947325294 24.73423348295541 25.254889306251492 28 24.76942809102322 24.551795401704986 25.412174196793973 25.266602310477822 29 24.91862774333953 24.509568434724994 25.19208928424138 25.379714537694092 30 24.841943252755737 24.637908420900924 25.499278037567425 25.02087028877591 31 25.485603440852415 24.456520261236477 24.538553228518467 25.51932306939264 32 25.109313194084397 24.616134844985552 24.45080543701711 25.823746523912945 33 24.823406031523596 24.286168792380966 25.054272110163094 25.836153065932344 34 25.50466482424313 24.406915161199976 25.166031124207688 24.92238889034921 35 25.844342423102546 24.324566849912305 25.108882352674584 24.722208374310565 36 24.733662374626654 24.876972094941557 24.893106902162337 25.49625862826945 37 25.817296492788067 24.488665667791533 24.61456744265306 25.079470396767345 38 25.022751911704454 24.637601023926674 25.022751911704454 25.316895152664422 39 25.72543474418415 24.30008112505495 24.49623153725181 25.478252593509087 40 25.963689429508914 24.498667585156717 24.995921179051177 24.5417218062832 41 24.933311217039698 24.78538584321542 25.372555311128213 24.90874762861667 42 26.033147368468757 25.02939030414546 24.7258340093632 24.21162831802258 43 25.17604405066733 24.323582062495753 25.015431329450955 25.484942557385963 44 24.965285205152654 24.788901417233767 24.668532624656024 25.577280752957556 45 25.076408804324572 24.961659639111154 24.732795782741583 25.229135773822687 46 24.995875926103846 24.625343748357167 24.793388429752067 25.58539189578692 47 25.382298476969638 24.475985283627356 25.036414774019928 25.10530146538308 48 25.843658028335998 25.03723053747028 24.208868073828405 24.910243360365317 49 25.19931404787888 24.987673164842416 24.418735339223627 25.39427744805508 50 25.1162896091654 25.41005003262998 24.27316728301066 25.200493075193968 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 16.5 2 22.0 3 50.0 4 78.0 5 92.5 6 107.0 7 107.0 8 107.0 9 161.0 10 215.0 11 308.0 12 401.0 13 833.5 14 1266.0 15 1712.5 16 2159.0 17 2306.0 18 2453.0 19 2494.5 20 2536.0 21 2779.5 22 3023.0 23 3543.5 24 4064.0 25 5050.0 26 6036.0 27 7619.0 28 9202.0 29 10916.0 30 12630.0 31 14514.5 32 16399.0 33 19403.0 34 22407.0 35 26423.5 36 30440.0 37 35064.0 38 39688.0 39 43152.0 40 46616.0 41 50954.5 42 55293.0 43 56514.5 44 57736.0 45 63792.5 46 69849.0 47 75169.0 48 80489.0 49 83631.0 50 86773.0 51 84949.0 52 83125.0 53 82514.0 54 81903.0 55 82111.0 56 82319.0 57 80280.5 58 78242.0 59 71355.5 60 64469.0 61 56521.0 62 48573.0 63 42195.0 64 35817.0 65 30217.0 66 24617.0 67 21027.0 68 17437.0 69 15786.0 70 14135.0 71 10900.0 72 7665.0 73 6646.5 74 5628.0 75 4374.0 76 3120.0 77 2743.0 78 2366.0 79 1995.0 80 1624.0 81 1313.0 82 1002.0 83 817.0 84 632.0 85 463.5 86 295.0 87 213.0 88 131.0 89 101.0 90 71.0 91 54.0 92 37.0 93 34.5 94 32.0 95 29.0 96 26.0 97 19.5 98 13.0 99 11.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009426369180123413 2 3.6255266077397745E-4 3 3.6255266077397745E-4 4 0.0 5 0.0 6 9.063816519349436E-5 7 0.0 8 9.063816519349436E-5 9 0.0018127633038698872 10 9.063816519349436E-4 11 0.0 12 9.063816519349436E-5 13 7.251053215479549E-4 14 0.0 15 0.004894460920448695 16 0.0011782961475154266 17 0.0 18 5.438289911609661E-4 19 0.0 20 3.6255266077397745E-4 21 0.0 22 0.0 23 0.0010876579823219323 24 4.531908259674718E-4 25 0.001540848808289404 26 0.006072757067964122 27 0.005800842572383639 28 0.0048038227552552005 29 0.002265954129837359 30 0.004078717433707246 31 0.0066165860591250875 32 0.0032629739469657968 33 0.004622546424868212 34 0.0028097831209983252 35 0.002991059451385314 36 0.007522967711060031 37 0.004259993764094235 38 0.007613605876253526 39 0.0048038227552552005 40 0.002537868625417842 41 0.0026285067906113365 42 0.002991059451385314 43 0.0011782961475154266 44 0.0010876579823219323 45 0.0010876579823219323 46 9.063816519349436E-4 47 0.0024472304602243477 48 0.0024472304602243477 49 3.6255266077397745E-4 50 7.251053215479549E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1103288.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.03764349856597 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68357547873326 47.63368165303093 2 11.677714026851548 13.7884943519093 3 3.280020163991102 5.809339833294437 4 1.3725006197135827 3.241168091528454 5 0.7915911907689206 2.336683925861043 6 0.47020464488194985 1.665586451754622 7 0.3139566452398878 1.297468234697477 8 0.22787565763766623 1.0762593470091049 9 0.17001471454451592 0.903354129611063 >10 0.8754309208471756 9.173265894270566 >50 0.06517873181226876 2.654960136539702 >100 0.06529922429332247 7.641597173083313 >500 0.006174865753405047 2.4779342452187594 >1k 4.6311493150537857E-4 0.3002065321913492 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1144 0.10369006098135754 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1109 0.10051772519958524 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 9.063816519349435E-5 0.0 6 0.0 0.0 0.0 9.063816519349435E-5 0.0 7 0.0 0.0 0.0 9.063816519349435E-5 0.0 8 0.0 0.0 0.0 9.063816519349435E-5 0.0 9 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349435E-5 10 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349435E-5 11 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349435E-5 12 0.0 0.0 0.0 9.063816519349435E-5 2.7191449558048306E-4 13 0.0 0.0 0.0 9.063816519349435E-5 2.7191449558048306E-4 14 0.0 0.0 0.0 9.063816519349435E-5 2.7191449558048306E-4 15 0.0 0.0 0.0 9.063816519349435E-5 3.625526607739774E-4 16 0.0 0.0 0.0 9.063816519349435E-5 5.438289911609661E-4 17 0.0 0.0 0.0 9.063816519349435E-5 6.344671563544605E-4 18 0.0 0.0 0.0 9.063816519349435E-5 7.251053215479548E-4 19 0.0 0.0 0.0 9.063816519349435E-5 7.251053215479548E-4 20 0.0 0.0 0.0 9.063816519349435E-5 7.251053215479548E-4 21 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349436E-4 22 0.0 0.0 0.0 9.063816519349435E-5 9.063816519349436E-4 23 0.0 0.0 0.0 6.344671563544605E-4 9.063816519349436E-4 24 0.0 0.0 0.0 8.157434867414492E-4 9.063816519349436E-4 25 0.0 0.0 0.0 8.157434867414492E-4 9.063816519349436E-4 26 0.0 0.0 0.0 8.157434867414492E-4 9.970198171284379E-4 27 0.0 0.0 0.0 0.0010876579823219323 9.970198171284379E-4 28 0.0 0.0 0.0 0.0021753159646438645 9.970198171284379E-4 29 0.0 0.0 0.0 0.004894460920448695 9.970198171284379E-4 30 0.0 0.0 0.0 0.007885520371834008 9.970198171284379E-4 31 9.063816519349435E-5 0.0 0.0 0.019305929186214297 9.970198171284379E-4 32 9.063816519349435E-5 0.0 0.0 0.032720377634851465 9.970198171284379E-4 33 9.063816519349435E-5 0.0 0.0 0.045681635257521155 9.970198171284379E-4 34 9.063816519349435E-5 0.0 0.0 0.06254033398351111 9.970198171284379E-4 35 9.063816519349435E-5 0.0 0.0 0.07958030903988804 9.970198171284379E-4 36 9.063816519349435E-5 0.0 0.0 0.10622792960677538 9.970198171284379E-4 37 9.063816519349435E-5 0.0 0.0 0.14547425513555845 9.970198171284379E-4 38 9.063816519349435E-5 0.0 0.0 0.1944188643400454 9.970198171284379E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTATG 45 0.0013972635 24.447065 32 AGTCCGT 55 1.5933173E-4 24.000395 6 GGTATCA 870 0.0 23.011873 1 TAGGACG 335 0.0 22.985455 4 GTATCAA 1785 0.0 22.924747 1 TTAGGAC 270 0.0 22.814156 3 ACCGTCG 310 0.0 21.29164 8 CGTCGTA 310 0.0 21.290674 10 ATACCGT 325 0.0 20.98496 6 GTCCTAA 200 0.0 20.900343 1 AGGACGT 380 0.0 20.84245 5 TGTAGGA 520 0.0 20.73017 2 CGGTCCA 380 0.0 20.263493 10 TAGCGGC 370 0.0 20.216549 30 CTAGCGG 370 0.0 20.216549 29 GGACGTG 415 0.0 20.14491 6 TACCGTC 340 0.0 20.060064 7 AATCACG 190 0.0 19.68632 34 CGAATGC 380 0.0 19.68275 43 GTCGTAG 360 0.0 19.554993 11 >>END_MODULE