##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064002_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1006915 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.337731586082242 32.0 32.0 32.0 32.0 32.0 2 31.44276925063188 32.0 32.0 32.0 32.0 32.0 3 31.513177378428168 32.0 32.0 32.0 32.0 32.0 4 31.590863181102677 32.0 32.0 32.0 32.0 32.0 5 31.53964237299077 32.0 32.0 32.0 32.0 32.0 6 35.136727529136024 36.0 36.0 36.0 36.0 36.0 7 35.16307533406494 36.0 36.0 36.0 36.0 36.0 8 35.11415462079719 36.0 36.0 36.0 36.0 36.0 9 35.22059558155356 36.0 36.0 36.0 36.0 36.0 10 35.076711539702956 36.0 36.0 36.0 36.0 36.0 11 35.212391314063254 36.0 36.0 36.0 36.0 36.0 12 35.127334482056575 36.0 36.0 36.0 36.0 36.0 13 35.16926552886788 36.0 36.0 36.0 36.0 36.0 14 35.11039164179697 36.0 36.0 36.0 36.0 36.0 15 35.08460297045927 36.0 36.0 36.0 36.0 36.0 16 35.099403623940454 36.0 36.0 36.0 36.0 36.0 17 35.06491511200051 36.0 36.0 36.0 36.0 36.0 18 35.05651321114493 36.0 36.0 36.0 36.0 36.0 19 35.0559024346643 36.0 36.0 36.0 36.0 36.0 20 35.04987511358953 36.0 36.0 36.0 36.0 36.0 21 35.049210707954494 36.0 36.0 36.0 36.0 36.0 22 35.02792489932119 36.0 36.0 36.0 36.0 36.0 23 34.975582844629386 36.0 36.0 36.0 36.0 36.0 24 34.94716237219626 36.0 36.0 36.0 36.0 36.0 25 34.927116986041526 36.0 36.0 36.0 36.0 36.0 26 34.864762169597235 36.0 36.0 36.0 32.0 36.0 27 34.86354756856338 36.0 36.0 36.0 32.0 36.0 28 34.84254182329194 36.0 36.0 36.0 32.0 36.0 29 34.81531112358044 36.0 36.0 36.0 32.0 36.0 30 34.796220137747476 36.0 36.0 36.0 32.0 36.0 31 34.78271651529672 36.0 36.0 36.0 32.0 36.0 32 34.760052238768914 36.0 36.0 36.0 32.0 36.0 33 34.71514676015354 36.0 36.0 36.0 32.0 36.0 34 34.71832875664778 36.0 36.0 36.0 32.0 36.0 35 34.67268637372569 36.0 36.0 36.0 32.0 36.0 36 34.6486764026755 36.0 36.0 36.0 32.0 36.0 37 34.63015150236117 36.0 36.0 36.0 32.0 36.0 38 34.59432424782628 36.0 36.0 36.0 32.0 36.0 39 34.589544301157495 36.0 36.0 36.0 32.0 36.0 40 34.569228782965794 36.0 36.0 36.0 32.0 36.0 41 34.54347884379516 36.0 36.0 36.0 32.0 36.0 42 34.488709573300625 36.0 36.0 36.0 32.0 36.0 43 34.47663010283887 36.0 36.0 36.0 32.0 36.0 44 34.414499734337056 36.0 36.0 36.0 32.0 36.0 45 34.38039258527284 36.0 36.0 36.0 32.0 36.0 46 34.34583753345615 36.0 36.0 36.0 32.0 36.0 47 34.307054716634475 36.0 36.0 36.0 32.0 36.0 48 34.26122065914203 36.0 36.0 36.0 32.0 36.0 49 34.24880153736909 36.0 36.0 36.0 32.0 36.0 50 33.653437479827 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 1.0 20 6.0 21 33.0 22 98.0 23 266.0 24 768.0 25 1604.0 26 3431.0 27 6429.0 28 10850.0 29 16950.0 30 24084.0 31 34393.0 32 49523.0 33 80951.0 34 170885.0 35 606640.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.40311712871366 18.339153615726282 12.121582322233081 26.136146933326977 2 15.693709387007615 20.756907498463125 37.46172708069118 26.087656033838076 3 17.668808533036717 24.81115491950621 29.316820768489738 28.203215778967333 4 12.011242259773665 16.45441770159348 36.58829196108907 34.946048077543786 5 13.936330276140488 37.480422875813744 33.61872650620956 14.964520341836202 6 33.53027170145613 36.42009148745573 17.0055238083888 13.044113002699337 7 29.763088244787294 30.993976651455185 21.10019217113659 18.142742932620926 8 27.99305601074173 33.36978133187144 19.46491954625718 19.17224311112965 9 27.539142222950524 13.908660697881132 18.496183850512214 40.05601322865613 10 15.642671709176428 27.16102595475645 31.960778861184657 25.23552347488246 11 36.8664056711894 21.09892205292607 22.999779524368517 19.03489275151602 12 24.731208424949898 23.914952021721817 29.19395300889649 22.1598865444318 13 29.629103635670244 19.702416894425728 25.402915051166335 25.265564418737686 14 23.534628646793365 20.03740148096358 25.548806648445943 30.879163223797114 15 25.00009931749021 27.64740701896567 22.554207486155143 24.798286177388984 16 25.36381214948352 25.835057259508577 24.22855338179196 24.572577209215947 17 23.800122155296126 26.00805430448449 25.57177120213722 24.620052338082164 18 24.450151651481654 25.147529977733946 26.69989691274528 23.702421458039115 19 25.509899048082506 24.917793458236297 25.665324282585917 23.906983211095277 20 25.84252813061743 24.42770456148017 25.226087733759723 24.503679574142677 21 26.7593590322917 24.279507207659037 24.648654553760743 24.312479206288515 22 25.79713858383139 24.5999161795347 25.16769058727955 24.435254649354363 23 24.463576856115942 24.41828938495443 25.667667427085682 25.450466331843945 24 24.87476512253354 24.944483507927238 25.60939033158938 24.571361037949842 25 24.951459685468695 24.533243287532464 25.683909444380994 24.83138758261785 26 24.41771655302899 25.48738398279792 26.109916522240045 23.98498294193305 27 25.02279386204499 25.019317673933557 25.299697075036004 24.65819138898545 28 24.335990068280573 25.03260086902545 25.92774674115456 24.703662321539415 29 24.539076683497335 24.893335134254716 25.630355589278693 24.937232592969256 30 24.396428177709183 25.20456737191386 25.883892932729886 24.51511151764707 31 25.086954362616083 24.76396682723345 25.115955703431492 25.033123106718975 32 24.66503192513162 25.12397121027484 24.956425100334002 25.25457176425954 33 24.37643885356518 24.79992610822761 25.65464733562557 25.168987702581642 34 25.180010448054695 24.86736333606784 25.643915994462134 24.308710221415332 35 25.522177717702743 24.705603100242428 25.565082149075025 24.2071370329798 36 24.422360297798296 25.352483373987937 25.311166641505835 24.91398968670793 37 25.43538088564939 25.1406080385191 24.96114222491923 24.462868850912276 38 24.66680637673847 25.145826525778 25.44835511254441 24.739011984939122 39 25.203130105565087 24.891569591614385 24.949372657957806 24.955927644862726 40 25.572556232669374 24.981328608544345 25.323571241289994 24.122543917496287 41 24.574971644912868 25.424432451329558 25.715730071488586 24.284865832268984 42 25.628644269626545 25.625962742665777 25.11855825220059 23.626834735507092 43 24.820191041432036 24.944532834377128 25.417170687912034 24.818105436278803 44 24.520782082846278 25.422558920886964 24.987064269476345 25.069594726790417 45 24.658905597940624 25.44795641301174 25.087843353798668 24.80529463524897 46 24.60187485040823 25.248905807586997 24.98790851588081 25.161310826123962 47 24.966530670618102 25.029596024201204 25.446125304402063 24.557748000778634 48 25.37551495504944 25.561931662435793 24.53827849086886 24.52427489164591 49 24.754720129187188 25.678237699260407 24.797424995853657 24.769617175698748 50 24.888866377461028 25.80882236099855 24.63809569210723 24.66421556943319 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 77.0 1 50.0 2 23.0 3 77.0 4 131.0 5 144.0 6 157.0 7 143.5 8 130.0 9 213.0 10 296.0 11 421.5 12 547.0 13 1015.5 14 1484.0 15 2053.0 16 2622.0 17 2916.5 18 3211.0 19 3169.0 20 3127.0 21 3491.5 22 3856.0 23 4484.0 24 5112.0 25 6012.5 26 6913.0 27 8583.5 28 10254.0 29 11996.5 30 13739.0 31 15616.0 32 17493.0 33 20405.0 34 23317.0 35 27125.5 36 30934.0 37 35605.5 38 40277.0 39 42775.0 40 45273.0 41 49178.0 42 53083.0 43 54515.0 44 55947.0 45 60686.5 46 65426.0 47 69306.0 48 73186.0 49 75576.5 50 77967.0 51 75744.0 52 73521.0 53 72506.5 54 71492.0 55 71670.0 56 71848.0 57 68961.5 58 66075.0 59 59981.0 60 53887.0 61 47496.0 62 41105.0 63 35370.0 64 29635.0 65 25240.5 66 20846.0 67 17830.0 68 14814.0 69 13118.5 70 11423.0 71 8830.5 72 6238.0 73 5341.0 74 4444.0 75 3385.0 76 2326.0 77 2040.0 78 1754.0 79 1466.0 80 1178.0 81 980.5 82 783.0 83 653.0 84 523.0 85 359.0 86 195.0 87 144.0 88 93.0 89 71.0 90 49.0 91 36.0 92 23.0 93 23.0 94 23.0 95 26.5 96 30.0 97 22.0 98 14.0 99 14.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00903750564844103 2 1.9862649776793473E-4 3 4.965662444198368E-4 4 0.0 5 0.0 6 9.931324888396737E-5 7 0.0 8 9.931324888396737E-5 9 9.931324888396737E-4 10 8.938192399557063E-4 11 9.931324888396737E-5 12 9.931324888396737E-5 13 2.979397466519021E-4 14 2.979397466519021E-4 15 0.004270469702010597 16 7.945059910717389E-4 17 0.0 18 9.931324888396737E-5 19 0.0 20 4.965662444198368E-4 21 0.0 22 9.931324888396737E-5 23 0.0013903854843755432 24 6.951927421877716E-4 25 0.0019862649776793474 26 0.005958794933038042 27 0.00645536117745788 28 0.003972529955358695 29 0.0022842047243312497 30 0.0033766504620548906 31 0.00645536117745788 32 0.0027807709687510864 33 0.003674590208706793 34 0.002880084217635054 35 0.0025821444709831515 36 0.005859481684154074 37 0.00377390345759076 38 0.006753300924109781 39 0.004767035946430433 40 0.002681457719867119 41 0.004071843204242662 42 0.0025821444709831515 43 0.0012910722354915758 44 0.0013903854843755432 45 8.938192399557063E-4 46 7.945059910717389E-4 47 0.0022842047243312497 48 0.0030787107154029887 49 3.9725299553586946E-4 50 0.00188695172879538 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1006915.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.294323808010006 #Duplication Level Percentage of deduplicated Percentage of total 1 76.58096063733294 43.87654356283821 2 14.165460243606473 16.232009321733628 3 4.371881127660215 7.514519189348768 4 1.8587067764163374 4.259733916485603 5 0.8864709648608703 2.539487725356888 6 0.5277586572065959 1.8142545239085155 7 0.33611755284692696 1.3480339537257424 8 0.19575475865342848 0.8972509223398704 9 0.1644698764796748 0.8480871323720905 >10 0.7685949214671018 7.9517981246506375 >50 0.0706128054844909 2.8347736004026056 >100 0.06728501866925007 7.5997408007134855 >500 0.0059266593157740605 2.2837672261240582 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.9862649776793473E-4 2 0.0 0.0 0.0 0.0 1.9862649776793473E-4 3 0.0 0.0 0.0 0.0 1.9862649776793473E-4 4 0.0 0.0 0.0 0.0 1.9862649776793473E-4 5 0.0 0.0 0.0 0.0 1.9862649776793473E-4 6 0.0 0.0 0.0 0.0 1.9862649776793473E-4 7 0.0 0.0 0.0 0.0 1.9862649776793473E-4 8 0.0 0.0 0.0 0.0 1.9862649776793473E-4 9 0.0 0.0 0.0 0.0 1.9862649776793473E-4 10 0.0 0.0 0.0 0.0 1.9862649776793473E-4 11 0.0 0.0 0.0 0.0 1.9862649776793473E-4 12 0.0 0.0 0.0 0.0 2.979397466519021E-4 13 0.0 0.0 0.0 0.0 4.965662444198368E-4 14 0.0 0.0 0.0 0.0 5.958794933038042E-4 15 0.0 0.0 0.0 0.0 8.938192399557063E-4 16 0.0 0.0 0.0 9.931324888396737E-5 8.938192399557063E-4 17 0.0 0.0 0.0 9.931324888396737E-5 8.938192399557063E-4 18 0.0 0.0 0.0 9.931324888396737E-5 8.938192399557063E-4 19 0.0 0.0 0.0 1.9862649776793473E-4 8.938192399557063E-4 20 0.0 0.0 0.0 1.9862649776793473E-4 0.0010924457377236411 21 0.0 0.0 0.0 5.958794933038042E-4 0.0010924457377236411 22 0.0 0.0 0.0 9.931324888396737E-4 0.0010924457377236411 23 0.0 0.0 0.0 0.0016883252310274453 0.0010924457377236411 24 0.0 0.0 0.0 0.002482831222099184 0.0010924457377236411 25 0.0 0.0 0.0 0.003277337213170923 0.0010924457377236411 26 0.0 0.0 0.0 0.003475963710938858 0.0010924457377236411 27 0.0 0.0 0.0 0.004071843204242662 0.0010924457377236411 28 0.0 0.0 0.0 0.005064975693082336 0.0010924457377236411 29 0.0 0.0 0.0 0.00715055391964565 0.0011917589866076083 30 0.0 0.0 0.0 0.013010035603799725 0.0011917589866076083 31 0.0 0.0 0.0 0.02562281821206358 0.0011917589866076083 32 0.0 0.0 0.0 0.039923926051354884 0.0011917589866076083 33 0.0 0.0 0.0 0.052536708659618736 0.0011917589866076083 34 0.0 0.0 0.0 0.06614262375672227 0.0011917589866076083 35 0.0 0.0 0.0 0.08540939404021193 0.0011917589866076083 36 0.0 0.0 0.0 0.11152877849669535 0.0011917589866076083 37 0.0 0.0 0.0 0.15194927079247006 0.0011917589866076083 38 0.0 0.0 0.0 0.20369147346101707 0.0013903854843755432 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACCG 40 1.8197014E-5 33.000187 28 AACCGTA 30 0.0057457997 29.33204 7 GTATAAT 230 0.0 22.003403 1 TATGACG 50 0.0025808013 21.999031 4 CCGTCGT 290 0.0 21.241499 9 ATACCGT 305 0.0 20.917112 6 CGTCTTA 100 1.122995E-6 19.800112 15 CGTCGTA 325 0.0 19.63088 10 ACCGTCG 315 0.0 19.554695 8 TACCGTC 315 0.0 19.554695 7 CGCAATA 275 0.0 19.201061 36 GTATCAA 1865 0.0 18.640953 1 TAGGACG 320 0.0 18.561684 4 TTAACGG 60 0.0074089007 18.334347 35 GTTCGAC 60 0.007411023 18.333437 11 GGACGTG 360 0.0 18.332527 6 TACGAAT 295 0.0 17.897518 41 CGAATGC 295 0.0 17.897518 43 GTCCTAA 225 0.0 17.60272 1 CGTGCAA 100 2.4822259E-5 17.6001 11 >>END_MODULE