##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064001_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 970863 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229702851998685 32.0 32.0 32.0 32.0 32.0 2 31.39314712786459 32.0 32.0 32.0 32.0 32.0 3 31.47077703033281 32.0 32.0 32.0 32.0 32.0 4 31.5631330064077 32.0 32.0 32.0 32.0 32.0 5 31.49911367515293 32.0 32.0 32.0 32.0 32.0 6 35.07137670299517 36.0 36.0 36.0 36.0 36.0 7 35.10091228113544 36.0 36.0 36.0 36.0 36.0 8 35.05269744546862 36.0 36.0 36.0 36.0 36.0 9 35.16802061670905 36.0 36.0 36.0 36.0 36.0 10 35.004828693646786 36.0 36.0 36.0 36.0 36.0 11 35.15934586033251 36.0 36.0 36.0 36.0 36.0 12 35.06614733489689 36.0 36.0 36.0 36.0 36.0 13 35.10498906642853 36.0 36.0 36.0 36.0 36.0 14 35.048277666364875 36.0 36.0 36.0 36.0 36.0 15 35.01724651160875 36.0 36.0 36.0 36.0 36.0 16 35.031455519470825 36.0 36.0 36.0 36.0 36.0 17 34.99467793087181 36.0 36.0 36.0 36.0 36.0 18 34.991959730672605 36.0 36.0 36.0 36.0 36.0 19 34.9799652474139 36.0 36.0 36.0 36.0 36.0 20 34.971206030099 36.0 36.0 36.0 36.0 36.0 21 34.96150332230191 36.0 36.0 36.0 36.0 36.0 22 34.94772073917741 36.0 36.0 36.0 36.0 36.0 23 34.89541263803441 36.0 36.0 36.0 32.0 36.0 24 34.873787547779656 36.0 36.0 36.0 32.0 36.0 25 34.83558030329717 36.0 36.0 36.0 32.0 36.0 26 34.7795610709235 36.0 36.0 36.0 32.0 36.0 27 34.77185246528089 36.0 36.0 36.0 32.0 36.0 28 34.748939860721855 36.0 36.0 36.0 32.0 36.0 29 34.71167713673299 36.0 36.0 36.0 32.0 36.0 30 34.68507194114927 36.0 36.0 36.0 32.0 36.0 31 34.67412085948275 36.0 36.0 36.0 32.0 36.0 32 34.62236175443909 36.0 36.0 36.0 32.0 36.0 33 34.591085456959426 36.0 36.0 36.0 32.0 36.0 34 34.56786178894448 36.0 36.0 36.0 32.0 36.0 35 34.50651842741973 36.0 36.0 36.0 32.0 36.0 36 34.4817631323884 36.0 36.0 36.0 32.0 36.0 37 34.457961627953686 36.0 36.0 36.0 32.0 36.0 38 34.400999935109276 36.0 36.0 36.0 32.0 36.0 39 34.3820827449393 36.0 36.0 36.0 32.0 36.0 40 34.34655044017539 36.0 36.0 36.0 32.0 36.0 41 34.32661456868786 36.0 36.0 36.0 32.0 36.0 42 34.23483230898695 36.0 36.0 36.0 32.0 36.0 43 34.22082415335635 36.0 36.0 36.0 32.0 36.0 44 34.12921390556649 36.0 36.0 36.0 32.0 36.0 45 34.07135713277775 36.0 36.0 36.0 32.0 36.0 46 34.02339258989167 36.0 36.0 36.0 32.0 36.0 47 33.9493522773038 36.0 36.0 36.0 32.0 36.0 48 33.88664312060507 36.0 36.0 36.0 32.0 36.0 49 33.835302200207444 36.0 36.0 36.0 32.0 36.0 50 33.25407807280739 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 4.0 19 2.0 20 6.0 21 24.0 22 124.0 23 390.0 24 952.0 25 2209.0 26 4370.0 27 7865.0 28 12972.0 29 19220.0 30 27050.0 31 37495.0 32 52549.0 33 83724.0 34 168516.0 35 553389.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.404613273668986 17.93855149140265 12.060603813079183 25.59623142184918 2 15.56547122430355 20.45044878014614 38.00798060264468 25.976099392905628 3 18.174261635536254 25.299476135640287 28.819955874264313 27.706306354559146 4 11.899310201336338 16.118855080479943 35.718427831733216 36.26340688645051 5 13.767853960857504 37.6969768134124 33.02577191632599 15.509397309404108 6 33.6484138338777 35.86953051048397 17.07130666221702 13.410748993421318 7 29.673805675981058 30.800535193946004 20.853714684770146 18.67194444530279 8 28.4942365709683 33.11085086155307 18.946236492687436 19.44867607479119 9 27.937053357147416 13.459490304412402 18.400501002210426 40.20295533622975 10 16.224495366445797 27.06640449172017 31.16784930365359 25.541250838180446 11 37.235776042321156 20.82005475546473 22.727431911023398 19.216737291190718 12 25.398949182325413 23.599828194091234 29.079489073123604 21.921733550459745 13 30.39768864717879 19.635065817934617 25.36132913087366 24.605916404012937 14 23.74523618235379 19.814803370207855 25.575160167274376 30.86480028016398 15 24.89400625455804 27.84009674375677 22.844072796792787 24.4218242048924 16 24.852861501317395 25.536177427295968 25.027347057333028 24.583614014053605 17 23.43451135742118 26.06031953014998 25.79200154913721 24.713167563291627 18 24.35230171981365 24.585290788279682 27.66358932947147 23.3988181624352 19 25.704683054852286 24.317462213991277 26.14614641421747 23.83170831693897 20 26.12589135533392 23.802985621922165 25.95130261738904 24.11982040535488 21 26.89009674897488 23.558524735209808 25.168638623575106 24.382739892240203 22 26.0103907661439 24.275643706314597 25.52391586033854 24.19004966720296 23 24.186029264835845 24.29273899993614 26.50325794297415 25.017973792253862 24 24.975640103908088 24.622138355969668 26.207540134602585 24.194681405519653 25 24.754055977693795 24.492429837328284 26.289101005200592 24.46441317977733 26 24.03629145648929 25.38187301904498 26.800692619645304 23.781142904820424 27 24.749639988380743 25.006953014105864 25.92938621881702 24.314020778696378 28 23.881387235366283 24.944711857877287 26.54613662840703 24.6277642783494 29 24.161344814799556 24.71179597049977 26.212764204194304 24.914095010506365 30 23.902841497858525 25.031571053927276 26.539565277402954 24.52602217081125 31 24.792308112267445 24.79024793235193 25.55189644711673 24.865547508263898 32 24.34576599404633 25.19370023588064 25.4239156185944 25.036618151478628 33 23.91123416808814 24.901732960866234 26.199393504898932 24.987639366146695 34 24.70460994916747 24.869828549650556 26.287474184593673 24.138087316588297 35 24.92393169612232 24.937013178305754 26.267822231927468 23.87123289364446 36 23.9799460641009 25.551256615800455 25.96999120296833 24.498806117130314 37 24.891020860543783 25.49679242873094 25.368139361452286 24.244047349272993 38 24.227634571645183 25.622486567557768 25.70746942677259 24.44240943402446 39 24.94550998125296 24.887826785603924 25.492058260027605 24.67460497311551 40 25.330490405117274 25.320292945211833 25.738285796689432 23.61093085298147 41 24.353182328523015 25.45574405405684 26.172862396094065 24.018211221326084 42 25.32881217663412 26.113800068600174 25.32901818316659 23.228369571599117 43 24.3721931523217 25.28130278933707 25.75820938568662 24.58829467265461 44 24.00911776460264 25.841013872351297 25.30385681854701 24.846011544499056 45 24.180460421280323 26.097543389813048 25.141473966112173 24.58052222279446 46 24.121212745466625 25.491860267496175 25.36454980403871 25.02237718299849 47 24.99878970663519 25.173792977002368 25.263097176771844 24.5643201395906 48 25.087475884260936 25.924998892710327 24.469453740527523 24.51807148250122 49 24.606662759473828 26.033852495573505 24.654455487357072 24.705029257595594 50 24.374313748514194 26.64314098721332 24.348872230016045 24.633673034256436 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 36.0 1 32.5 2 29.0 3 94.0 4 159.0 5 178.0 6 197.0 7 231.5 8 266.0 9 349.5 10 433.0 11 659.0 12 885.0 13 1699.0 14 2513.0 15 3566.0 16 4619.0 17 5252.5 18 5886.0 19 5938.5 20 5991.0 21 6144.0 22 6297.0 23 6679.5 24 7062.0 25 6787.0 26 6512.0 27 7744.0 28 8976.0 29 10618.5 30 12261.0 31 14619.0 32 16977.0 33 20925.5 34 24874.0 35 28885.0 36 32896.0 37 35967.5 38 39039.0 39 40238.0 40 41437.0 41 44277.5 42 47118.0 43 47739.0 44 48360.0 45 53587.0 46 58814.0 47 62861.0 48 66908.0 49 69351.5 50 71795.0 51 70003.0 52 68211.0 53 67547.0 54 66883.0 55 67277.5 56 67672.0 57 65948.0 58 64224.0 59 59125.0 60 54026.0 61 47930.5 62 41835.0 63 36170.5 64 30506.0 65 25789.5 66 21073.0 67 18171.5 68 15270.0 69 13511.5 70 11753.0 71 9155.0 72 6557.0 73 5579.5 74 4602.0 75 3671.5 76 2741.0 77 2367.5 78 1994.0 79 1666.0 80 1338.0 81 1081.0 82 824.0 83 678.0 84 532.0 85 374.0 86 216.0 87 162.5 88 109.0 89 81.5 90 54.0 91 42.5 92 31.0 93 26.5 94 22.0 95 23.5 96 25.0 97 22.0 98 19.0 99 12.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010197113289928651 2 9.270102990844228E-4 3 1.0300114434271364E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 9.270102990844228E-4 10 0.0010300114434271365 11 1.0300114434271364E-4 12 0.0 13 3.09003433028141E-4 14 3.09003433028141E-4 15 0.005253058361478396 16 9.270102990844228E-4 17 0.0 18 2.0600228868542729E-4 19 1.0300114434271364E-4 20 0.0010300114434271365 21 0.0 22 1.0300114434271364E-4 23 5.150057217135683E-4 24 5.150057217135683E-4 25 0.001236013732112564 26 0.005768064083191964 27 0.006283069804905532 28 0.004120045773708546 29 0.002369026319882414 30 0.003811042340680405 31 0.00762208468136081 32 0.0033990377633095503 33 0.004017044629365832 34 0.002884032041595982 35 0.002575028608567841 36 0.008343092691759806 37 0.0036050400519949777 38 0.008137090403074377 39 0.004429049206736687 40 0.0033990377633095503 41 0.0033990377633095503 42 0.002060022886854273 43 0.002369026319882414 44 0.0011330125877698502 45 0.0013390148764552774 46 8.240091547417091E-4 47 0.002472027464225128 48 0.002472027464225128 49 4.1200457737085457E-4 50 9.270102990844228E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 970863.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.34898997610995 #Duplication Level Percentage of deduplicated Percentage of total 1 72.69199428281938 38.053524800547535 2 15.101332421615016 15.81078999130057 3 5.453904208194042 8.565191301762413 4 2.5100128329808595 5.255865465344893 5 1.3229771193567048 3.4628257979913473 6 0.7646516515903042 2.401724498659005 7 0.47075730896359885 1.725056875368115 8 0.3141016035356616 1.3154321355974727 9 0.2205503702224931 1.0391030208004168 >10 0.988788514095062 8.920599380768394 >50 0.07858923444993245 2.8853726749987 >100 0.07481896875548462 7.725219337230607 >500 0.006927682098728084 2.4575721538645774 >1k 5.938013227481216E-4 0.3817225657659627 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1444 0.14873365243087852 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1238 0.12751541669627947 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1002 0.10320714663139907 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 989 0.10186813175494379 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0600228868542729E-4 2 0.0 0.0 0.0 0.0 2.0600228868542729E-4 3 0.0 0.0 0.0 0.0 2.0600228868542729E-4 4 0.0 0.0 0.0 0.0 2.0600228868542729E-4 5 0.0 0.0 0.0 0.0 2.0600228868542729E-4 6 0.0 0.0 0.0 1.0300114434271364E-4 2.0600228868542729E-4 7 0.0 0.0 0.0 1.0300114434271364E-4 2.0600228868542729E-4 8 0.0 0.0 0.0 1.0300114434271364E-4 2.0600228868542729E-4 9 0.0 0.0 0.0 1.0300114434271364E-4 2.0600228868542729E-4 10 0.0 0.0 0.0 2.0600228868542729E-4 3.0900343302814093E-4 11 0.0 0.0 0.0 2.0600228868542729E-4 3.0900343302814093E-4 12 0.0 0.0 0.0 2.0600228868542729E-4 0.001442016020797991 13 0.0 0.0 0.0 2.0600228868542729E-4 0.0018540205981688457 14 0.0 0.0 0.0 2.0600228868542729E-4 0.0018540205981688457 15 0.0 0.0 0.0 3.0900343302814093E-4 0.002060022886854273 16 0.0 0.0 0.0 4.1200457737085457E-4 0.0021630240311969868 17 0.0 0.0 0.0 4.1200457737085457E-4 0.0021630240311969868 18 0.0 0.0 0.0 4.1200457737085457E-4 0.002575028608567841 19 0.0 0.0 0.0 5.150057217135683E-4 0.002575028608567841 20 0.0 0.0 0.0 6.180068660562819E-4 0.0027810308972532685 21 0.0 0.0 0.0 9.270102990844228E-4 0.002987033185938696 22 0.0 0.0 0.0 0.0013390148764552774 0.002987033185938696 23 0.0 0.0 0.0 0.002987033185938696 0.002987033185938696 24 0.0 0.0 0.0 0.004944054928450255 0.002987033185938696 25 0.0 0.0 0.0 0.0062830698049055325 0.002987033185938696 26 0.0 0.0 0.0 0.00762208468136081 0.0030900343302814096 27 0.0 0.0 0.0 0.009167101846501515 0.003193035474624123 28 0.0 0.0 0.0 0.011948132743754784 0.003193035474624123 29 0.0 0.0 0.0 0.018025200259974887 0.003193035474624123 30 1.0300114434271364E-4 0.0 0.0 0.026986299817790976 0.003193035474624123 31 1.0300114434271364E-4 0.0 0.0 0.05242758247044125 0.0036050400519949777 32 1.0300114434271364E-4 0.0 0.0 0.07931088114388951 0.0036050400519949777 33 2.0600228868542729E-4 0.0 0.0 0.09888109856900511 0.0036050400519949777 34 2.0600228868542729E-4 0.0 0.0 0.12236535947914381 0.004017044629365832 35 2.0600228868542729E-4 0.0 0.0 0.15192668790550262 0.004017044629365832 36 2.0600228868542729E-4 0.0 0.0 0.19292114335390267 0.004017044629365832 37 2.0600228868542729E-4 0.0 0.0 0.2482327578659399 0.004017044629365832 38 2.0600228868542729E-4 0.0 0.0 0.323732596669149 0.004017044629365832 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATAC 50 0.002581023 21.99861 4 TGTAATA 115 8.772986E-9 21.042147 2 GATATAC 220 0.0 20.999754 1 CTTACGG 55 0.0044846274 19.998737 2 GTAATAC 100 1.1236516E-6 19.798748 3 TAGTACA 100 1.1236516E-6 19.798748 4 TAGGACG 585 0.0 19.554321 4 ACTGTTC 330 0.0 19.332111 8 ACGTATG 70 8.1167655E-4 18.858864 22 TAATACT 140 4.081812E-9 18.855951 4 GACGTGA 315 0.0 18.855951 7 CTTAGTA 70 8.1252033E-4 18.855951 2 TGTAGGA 825 0.0 18.665487 2 GTCCTAC 595 0.0 18.487179 1 CTAAACG 60 0.0074115773 18.333118 12 ACGGAAT 240 0.0 18.333118 18 GTAGGAC 780 0.0 17.768108 3 CGTATGT 75 0.0012898319 17.601608 23 CGCGGGA 225 0.0 17.599794 44 TAGGACC 665 0.0 17.532726 4 >>END_MODULE