##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064000_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 278585 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.286156828257084 32.0 32.0 32.0 32.0 32.0 2 30.91294218999587 32.0 32.0 32.0 32.0 32.0 3 30.90152018235009 32.0 32.0 32.0 32.0 32.0 4 30.93945833408116 32.0 32.0 32.0 32.0 32.0 5 30.870334009368776 32.0 32.0 32.0 32.0 32.0 6 34.52907730136224 36.0 36.0 36.0 32.0 36.0 7 34.466819821598435 36.0 36.0 36.0 32.0 36.0 8 34.45466195236642 36.0 36.0 36.0 32.0 36.0 9 34.56999838469408 36.0 36.0 36.0 32.0 36.0 10 34.30194016188955 36.0 36.0 36.0 32.0 36.0 11 34.542297682933395 36.0 36.0 36.0 32.0 36.0 12 34.401076870614 36.0 36.0 36.0 32.0 36.0 13 34.435314177001636 36.0 36.0 36.0 32.0 36.0 14 34.35212233250175 36.0 36.0 36.0 32.0 36.0 15 34.30818242188201 36.0 36.0 36.0 32.0 36.0 16 34.30174273561032 36.0 36.0 36.0 32.0 36.0 17 34.24691925265179 36.0 36.0 36.0 32.0 36.0 18 34.22989392824452 36.0 36.0 36.0 32.0 36.0 19 34.27324156002656 36.0 36.0 36.0 32.0 36.0 20 34.2360069637633 36.0 36.0 36.0 32.0 36.0 21 34.251729274727644 36.0 36.0 36.0 32.0 36.0 22 34.225331586409894 36.0 36.0 36.0 32.0 36.0 23 34.14981423981909 36.0 36.0 36.0 32.0 36.0 24 34.160015794102335 36.0 36.0 36.0 32.0 36.0 25 33.75105264102518 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 3.0 5 1.0 6 13.0 7 1.0 8 15.0 9 17.0 10 29.0 11 11.0 12 25.0 13 12.0 14 23.0 15 52.0 16 78.0 17 101.0 18 99.0 19 155.0 20 249.0 21 319.0 22 535.0 23 871.0 24 1319.0 25 1938.0 26 2854.0 27 3900.0 28 5305.0 29 7065.0 30 9531.0 31 12884.0 32 18174.0 33 25876.0 34 57508.0 35 129621.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.62088344183942 18.090412562527156 12.749255778712218 25.53944821692121 2 15.73169637248039 20.25523665930752 38.544325381867786 25.4687415863443 3 18.11916231719662 23.9936391244104 29.768323413909208 28.118875144483773 4 12.982905798818267 16.623949112264604 36.90473626397295 33.48840882494418 5 14.396025315637756 36.43843582959689 34.44570887016582 14.719829984599533 6 32.358864815379924 36.6824032023551 17.416934427112317 13.541797555152668 7 29.11040180382667 31.291940585741006 21.446651754458404 18.15100585597392 8 27.15853881868813 34.41489189800601 19.665909001138292 18.76066028216757 9 26.916750466886942 15.379974141646317 19.153498060623473 38.54977733084327 10 15.631801627721547 27.90831316040887 32.739040175845645 23.720845036023935 11 34.957314379505156 22.593030230110873 23.23196770474552 19.217687685638452 12 23.71576142004353 24.82130927324057 29.464035572923773 21.998893733792123 13 28.833326748249867 20.85938931133197 25.67464180139149 24.63264213902668 14 22.894829481367598 20.077159052538562 26.498818187696223 30.52919327839762 15 24.85892955277705 28.115313192556222 22.511646618080725 24.514110636586008 16 24.250446301890452 27.299667024666036 24.371495587268633 24.07839108617488 17 23.123228825826008 27.501194251787787 25.763872177345494 23.61170474504071 18 23.474512339691778 26.84987606423106 26.9245967597083 22.75101483636886 19 24.30453774750697 25.98068799034399 26.982211110153177 22.732563151995862 20 24.67479747813123 25.520809009753382 26.49327322041205 23.31112029170334 21 24.887380105614827 25.523942953622875 26.19930308582103 23.389373854941265 22 25.096631893554044 25.538839555134064 25.945843032445325 23.41868551886657 23 24.287146177695227 25.754347896376185 26.131566751570844 23.82693917435774 24 23.870114847558458 25.76615930653198 26.428948625744965 23.9347772201646 25 24.430777189415224 25.85841458245019 26.136829021202608 23.57397920693198 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 15.0 2 44.0 3 73.0 4 73.0 5 73.0 6 154.0 7 235.0 8 235.0 9 235.0 10 367.5 11 500.0 12 500.0 13 500.0 14 716.0 15 932.0 16 932.0 17 932.0 18 1687.0 19 2442.0 20 2442.0 21 2442.0 22 3511.5 23 4581.0 24 4581.0 25 4581.0 26 6726.5 27 8872.0 28 8872.0 29 8872.0 30 11684.0 31 14496.0 32 14496.0 33 14496.0 34 17792.5 35 21089.0 36 21089.0 37 21089.0 38 24764.5 39 28440.0 40 28440.0 41 28440.0 42 30991.0 43 33542.0 44 33542.0 45 33542.0 46 35651.5 47 37761.0 48 37761.0 49 37761.0 50 37426.5 51 37092.0 52 37092.0 53 37092.0 54 34326.0 55 31560.0 56 31560.0 57 31560.0 58 27329.0 59 23098.0 60 23098.0 61 23098.0 62 19693.0 63 16288.0 64 16288.0 65 16288.0 66 12675.0 67 9062.0 68 9062.0 69 9062.0 70 6761.5 71 4461.0 72 4461.0 73 4461.0 74 3233.5 75 2006.0 76 2006.0 77 2006.0 78 1524.0 79 1042.0 80 1042.0 81 1042.0 82 709.0 83 376.0 84 376.0 85 376.0 86 277.5 87 179.0 88 179.0 89 179.0 90 113.5 91 48.0 92 48.0 93 48.0 94 38.0 95 28.0 96 28.0 97 28.0 98 197.5 99 367.0 100 367.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0380494283611824 2 0.007179137426638189 3 0.002512698099323366 4 0.003948525584651004 5 0.007897051169302009 6 0.014358274853276377 7 0.023691153507906022 8 0.03517777339052713 9 0.052048746343126874 10 0.0570741425417736 11 0.055279358185114064 12 0.061381624997756526 13 0.06389432309707989 14 0.07143241739504999 15 0.06389432309707989 16 0.06676597806773515 17 0.06030475438376079 18 0.07717572733636054 19 0.07502198610836908 20 0.07897051169302008 21 0.07717572733636054 22 0.07502198610836908 23 0.083277994149003 24 0.07753468420769245 25 0.08004738230701582 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 278585.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.915157729891575 #Duplication Level Percentage of deduplicated Percentage of total 1 57.91677014340906 24.85507325910275 2 17.215595740511837 14.7762001323623 3 8.756763288104855 11.273936331370317 4 5.043632710652594 8.65793173237187 5 3.231247526365454 6.933474862914775 6 2.09369379664729 5.391071971272839 7 1.4354389770287184 4.312146307757516 8 0.9845578334971242 3.380196377498353 9 0.7557945039073465 2.9191536311912043 >10 2.5338271643540864 15.801040657732957 >50 0.02346135473348508 0.6681153924852818 >100 0.008379055261958958 0.7623275737722268 >500 8.379055261958957E-4 0.26933177016764054 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 749 0.2688586966276002 No Hit TATCAACGCAGAGTACTTTTTTTTT 452 0.16224850584202308 No Hit GGGGGGGGGGGGGGGGGGGGGGGGG 337 0.12096846563885348 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCTAAC 30 7.6956104E-4 19.001976 1 CCCTTAA 30 7.6956104E-4 19.001976 1 TTATATA 25 0.0060225567 18.998564 4 GGTATCA 60 7.6091965E-8 17.418478 1 TGTTACA 40 0.005267361 14.248922 2 GTATCAA 265 0.0 13.624058 1 GTACAAG 60 4.069742E-4 12.667983 1 TGCACTG 60 4.075915E-4 12.6657095 5 AAGGTTG 55 0.0030593178 12.089995 5 TGCTCAT 70 0.0014834664 10.858272 10 CTGTGTG 75 0.0026336457 10.134387 9 TTCAAGA 85 6.561378E-4 10.0580635 2 AGACAGT 90 0.0011064293 9.500987 6 CTGGAGG 80 0.0044986405 9.499282 4 CTGACCC 95 0.0018149456 8.99932 4 TATATCT 85 0.0074074767 8.9405 4 CTGTAGA 105 0.0044841114 8.143703 1 TATCAAC 440 0.0 7.988033 2 ATCAACG 470 0.0 7.882383 3 TCAACGC 485 0.0 7.638598 4 >>END_MODULE