##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063998_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 814956 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.322046834430324 32.0 32.0 32.0 32.0 32.0 2 31.416442114666314 32.0 32.0 32.0 32.0 32.0 3 31.490116030804117 32.0 32.0 32.0 32.0 32.0 4 31.5773587776518 32.0 32.0 32.0 32.0 32.0 5 31.52527989241137 32.0 32.0 32.0 32.0 32.0 6 35.10794815916442 36.0 36.0 36.0 36.0 36.0 7 35.132327389454154 36.0 36.0 36.0 36.0 36.0 8 35.07936133975331 36.0 36.0 36.0 36.0 36.0 9 35.194339326294916 36.0 36.0 36.0 36.0 36.0 10 35.04403427915127 36.0 36.0 36.0 36.0 36.0 11 35.18785185948689 36.0 36.0 36.0 36.0 36.0 12 35.10479093349825 36.0 36.0 36.0 36.0 36.0 13 35.133753233303395 36.0 36.0 36.0 36.0 36.0 14 35.08731882457458 36.0 36.0 36.0 36.0 36.0 15 35.064424337019425 36.0 36.0 36.0 36.0 36.0 16 35.07364692081536 36.0 36.0 36.0 36.0 36.0 17 35.03494912608779 36.0 36.0 36.0 36.0 36.0 18 35.031939147634965 36.0 36.0 36.0 36.0 36.0 19 35.035527071400175 36.0 36.0 36.0 36.0 36.0 20 35.01977039251199 36.0 36.0 36.0 36.0 36.0 21 35.017413210038335 36.0 36.0 36.0 36.0 36.0 22 35.001474926253685 36.0 36.0 36.0 36.0 36.0 23 34.945887876155275 36.0 36.0 36.0 36.0 36.0 24 34.927337181393845 36.0 36.0 36.0 36.0 36.0 25 34.89034009198043 36.0 36.0 36.0 32.0 36.0 26 34.84421858357997 36.0 36.0 36.0 32.0 36.0 27 34.841397572384274 36.0 36.0 36.0 32.0 36.0 28 34.810518604685406 36.0 36.0 36.0 32.0 36.0 29 34.783517146937996 36.0 36.0 36.0 32.0 36.0 30 34.77402338285748 36.0 36.0 36.0 32.0 36.0 31 34.76275406279603 36.0 36.0 36.0 32.0 36.0 32 34.714940438502204 36.0 36.0 36.0 32.0 36.0 33 34.69107411933896 36.0 36.0 36.0 32.0 36.0 34 34.67421799459112 36.0 36.0 36.0 32.0 36.0 35 34.64198189840924 36.0 36.0 36.0 32.0 36.0 36 34.60848438443303 36.0 36.0 36.0 32.0 36.0 37 34.595179371647056 36.0 36.0 36.0 32.0 36.0 38 34.55967193320866 36.0 36.0 36.0 32.0 36.0 39 34.55124571142491 36.0 36.0 36.0 32.0 36.0 40 34.53930150830229 36.0 36.0 36.0 32.0 36.0 41 34.51511615351013 36.0 36.0 36.0 32.0 36.0 42 34.459494745728605 36.0 36.0 36.0 32.0 36.0 43 34.444006793004775 36.0 36.0 36.0 32.0 36.0 44 34.375965082777476 36.0 36.0 36.0 32.0 36.0 45 34.34177059865809 36.0 36.0 36.0 32.0 36.0 46 34.310367676291726 36.0 36.0 36.0 32.0 36.0 47 34.27728000039266 36.0 36.0 36.0 32.0 36.0 48 34.22794850274125 36.0 36.0 36.0 32.0 36.0 49 34.20345024762073 36.0 36.0 36.0 32.0 36.0 50 33.61922484158654 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 3.0 20 5.0 21 26.0 22 74.0 23 274.0 24 672.0 25 1460.0 26 2951.0 27 5321.0 28 9227.0 29 13918.0 30 20151.0 31 28509.0 32 41168.0 33 66959.0 34 140225.0 35 484011.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.988518470340196 17.836377157695544 11.86207929078606 26.313025081178193 2 15.910159015695422 20.541480408024533 37.16751068469147 26.380849891588575 3 17.98700541747704 24.634243608542803 28.985526808228673 28.393224165751484 4 12.123967428916407 16.197561586146982 36.170296310475656 35.50817467446095 5 14.129351768684446 37.18593396453305 33.52180976641684 15.162904500365665 6 34.012022779227756 36.013242481468254 16.75679456361287 13.217940175691115 7 29.91714869796332 30.705291341597196 20.978239262584143 18.39932069785534 8 28.116241858456164 33.18633153200909 19.345338889461516 19.35208772007323 9 27.665670689433032 13.665584794065857 18.14539631508875 40.52334820141236 10 15.50696361739984 27.178231793361558 32.05362292165164 25.261181667586968 11 37.173540657409724 20.8028408895695 22.758529294833096 19.26508915818768 12 24.672865774348555 23.55489130701535 29.23041243944458 22.541830479191518 13 30.033756547923623 19.439035134541502 25.07015742012116 25.457050897413712 14 23.679712376757 19.369413035075556 25.533925186053217 31.416949402114223 15 25.239993766236317 27.161293726845802 22.435045532244388 25.163666974673493 16 25.637646481379228 25.558991349162525 23.926253144364683 24.877109025093564 17 24.001050363455203 25.69868802732908 25.379406986389448 24.920854622826262 18 24.66605477118954 24.95441460499611 26.332283785342486 24.047246838471864 19 25.715684566245457 24.60678762236887 25.54598173639248 24.13154607499319 20 25.919167947932937 24.174641603339595 25.104147621507604 24.802042827219864 21 26.809545546017212 24.10682294504243 24.671270596203968 24.412360912736393 22 25.8950176451244 24.225970481841966 25.018528607679436 24.8604832653542 23 24.795324364253915 24.00742133240403 25.500277318307425 25.696976985034624 24 24.945517996240252 24.73041224716178 25.32480599989202 24.99926375670595 25 25.173631562414105 24.33639612046963 25.429231947225823 25.060740369890443 26 24.9660705389201 25.020185881908297 25.542441890429313 24.47130168874229 27 25.224473467524515 24.537278486992996 25.021628234878335 25.216619810604158 28 24.672792376240295 24.70788758733922 25.642941813121684 24.976378223298802 29 24.72764531922987 24.580025278244758 25.451756592590772 25.240572809934598 30 24.666902270881035 24.927416722499956 25.670428971464894 24.73525203515411 31 25.331021398892133 24.545528173939935 24.871702364210666 25.25174806295726 32 24.92895147594412 24.923920406019615 24.73715727370002 25.409970844336243 33 24.607323418249642 24.51173121287979 25.336842880282727 25.54410248858784 34 25.276280042310173 24.45645905067159 25.385123212431925 24.88213769458631 35 25.72355552719607 24.450814421781395 25.41948182306788 24.406148227954656 36 24.94287572555805 25.018346034434096 24.976868043539618 25.061910196468233 37 25.57063673500441 24.883577957672074 24.842224357393274 24.70356094993024 38 24.885199792856493 24.93048175590936 25.18990199952387 24.994416451710283 39 25.453753412890755 24.54520354633862 24.868546185231768 25.132496855538854 40 25.61517176216508 24.82823783491935 25.157343837238557 24.399246565677018 41 24.83888305339315 25.05632344135 25.49672612327839 24.60806738197846 42 25.762906117360355 25.15059335438184 25.013896677436335 24.07260385082147 43 24.95481290148415 24.542392431391075 25.304775168876425 25.198019498248346 44 24.97993741947359 24.947297380207374 24.736486901036873 25.336278299282167 45 24.90999403641468 25.2394637190685 24.823239822025016 25.027302422491797 46 24.84680041720351 24.971347935456162 24.763114301490887 25.41873734584944 47 25.10049868946764 24.88600331805197 25.137188687209793 24.876309305270595 48 25.51657113827872 25.16047173967195 24.49023917068843 24.832717951360898 49 25.007638458565197 25.32385223724009 24.59571387377217 25.07279543042254 50 25.01690298118278 25.502702636374234 24.544846584738846 24.93554779770414 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 79.0 1 56.0 2 33.0 3 89.5 4 146.0 5 158.0 6 170.0 7 164.5 8 159.0 9 211.0 10 263.0 11 403.0 12 543.0 13 998.0 14 1453.0 15 1907.5 16 2362.0 17 2488.0 18 2614.0 19 2609.5 20 2605.0 21 2797.5 22 2990.0 23 3504.5 24 4019.0 25 4356.0 26 4693.0 27 5982.5 28 7272.0 29 8497.5 30 9723.0 31 11085.0 32 12447.0 33 14636.0 34 16825.0 35 19534.0 36 22243.0 37 25782.5 38 29322.0 39 31751.5 40 34181.0 41 37445.0 42 40709.0 43 42116.5 44 43524.0 45 47852.0 46 52180.0 47 55843.0 48 59506.0 49 61326.5 50 63147.0 51 62328.0 52 61509.0 53 61035.5 54 60562.0 55 60443.0 56 60324.0 57 58610.5 58 56897.0 59 51833.0 60 46769.0 61 41059.5 62 35350.0 63 30673.0 64 25996.0 65 21905.5 66 17815.0 67 15128.0 68 12441.0 69 10982.0 70 9523.0 71 7456.5 72 5390.0 73 4510.0 74 3630.0 75 2783.0 76 1936.0 77 1696.5 78 1457.0 79 1197.0 80 937.0 81 748.0 82 559.0 83 455.5 84 352.0 85 243.5 86 135.0 87 95.0 88 55.0 89 42.5 90 30.0 91 30.5 92 31.0 93 24.5 94 18.0 95 17.0 96 16.0 97 12.5 98 9.0 99 8.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010061892912009974 2 6.135300556103642E-4 3 1.2270601112207284E-4 4 0.0 5 0.0 6 3.6811803336621855E-4 7 2.454120222441457E-4 8 0.0 9 0.0013497661223428013 10 7.362360667324371E-4 11 0.0 12 0.0 13 3.6811803336621855E-4 14 1.2270601112207284E-4 15 0.004785534433760841 16 7.362360667324371E-4 17 0.0 18 2.454120222441457E-4 19 2.454120222441457E-4 20 8.5894207785451E-4 21 0.0 22 0.0 23 9.816480889765827E-4 24 9.816480889765827E-4 25 0.0014724721334648742 26 0.0036811803336621856 27 0.00601259454498157 28 0.0036811803336621856 29 0.003190356289173894 30 0.0036811803336621856 31 0.0066261246005919336 32 0.002454120222441457 33 0.004417416400394622 34 0.0026995322446856027 35 0.0026995322446856027 36 0.008098596734056808 37 0.004049298367028404 38 0.007607772689568516 39 0.003803886344784258 40 0.00257682623356353 41 0.002454120222441457 42 0.001595178144586947 43 0.0013497661223428013 44 7.362360667324371E-4 45 0.0012270601112207285 46 7.362360667324371E-4 47 0.002454120222441457 48 0.0018405901668310928 49 1.2270601112207284E-4 50 0.0013497661223428013 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 814956.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.91654065296126 #Duplication Level Percentage of deduplicated Percentage of total 1 78.34875521881607 48.51083887614735 2 13.541896579399342 16.769347801531527 3 3.909412637827809 7.261719195577982 4 1.6419404770177823 4.066530971800565 5 0.7690100511628303 2.38072210476796 6 0.45085322302712943 1.674916314724672 7 0.28505740001869084 1.2354837667679297 8 0.1950507702993168 0.9661495158903246 9 0.13439349475142046 0.7489062253142874 >10 0.6132166270355573 6.833547350165686 >50 0.05710463599129843 2.535806970014946 >100 0.050912979734998205 6.101600549816602 >500 0.0023959049178135373 0.9144303574800509 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.454120222441457E-4 2 0.0 0.0 0.0 0.0 2.454120222441457E-4 3 0.0 0.0 0.0 0.0 2.454120222441457E-4 4 0.0 0.0 0.0 0.0 2.454120222441457E-4 5 0.0 0.0 0.0 0.0 2.454120222441457E-4 6 0.0 0.0 0.0 0.0 2.454120222441457E-4 7 0.0 0.0 0.0 0.0 2.454120222441457E-4 8 0.0 0.0 0.0 0.0 2.454120222441457E-4 9 0.0 0.0 0.0 0.0 2.454120222441457E-4 10 0.0 0.0 0.0 0.0 2.454120222441457E-4 11 0.0 0.0 0.0 0.0 2.454120222441457E-4 12 0.0 0.0 0.0 1.2270601112207284E-4 3.6811803336621855E-4 13 0.0 0.0 0.0 1.2270601112207284E-4 4.908240444882914E-4 14 0.0 0.0 0.0 1.2270601112207284E-4 4.908240444882914E-4 15 0.0 0.0 0.0 1.2270601112207284E-4 6.135300556103642E-4 16 0.0 0.0 0.0 1.2270601112207284E-4 6.135300556103642E-4 17 0.0 0.0 0.0 1.2270601112207284E-4 6.135300556103642E-4 18 0.0 0.0 0.0 1.2270601112207284E-4 7.362360667324371E-4 19 0.0 1.2270601112207284E-4 0.0 1.2270601112207284E-4 7.362360667324371E-4 20 0.0 1.2270601112207284E-4 0.0 1.2270601112207284E-4 7.362360667324371E-4 21 0.0 1.2270601112207284E-4 0.0 2.454120222441457E-4 7.362360667324371E-4 22 0.0 1.2270601112207284E-4 0.0 2.454120222441457E-4 7.362360667324371E-4 23 0.0 1.2270601112207284E-4 0.0 0.0014724721334648742 8.5894207785451E-4 24 0.0 1.2270601112207284E-4 0.0 0.00257682623356353 9.816480889765827E-4 25 0.0 1.2270601112207284E-4 0.0 0.003067650278051821 9.816480889765827E-4 26 0.0 1.2270601112207284E-4 0.0 0.0038038863447842582 0.0011043541000986556 27 0.0 2.454120222441457E-4 0.0 0.0045401224115166955 0.0011043541000986556 28 0.0 2.454120222441457E-4 0.0 0.006258006567225715 0.0011043541000986556 29 0.0 2.454120222441457E-4 0.0 0.009816480889765828 0.0011043541000986556 30 0.0 2.454120222441457E-4 0.0 0.017178841557090197 0.0011043541000986556 31 0.0 2.454120222441457E-4 0.0 0.03153544485837272 0.0011043541000986556 32 0.0 2.454120222441457E-4 0.0 0.0496959345044395 0.0011043541000986556 33 0.0 2.454120222441457E-4 0.0 0.06270277168337922 0.0011043541000986556 34 0.0 2.454120222441457E-4 0.0 0.08135408537393429 0.0011043541000986556 35 0.0 2.454120222441457E-4 0.0 0.10196869524244254 0.0011043541000986556 36 0.0 2.454120222441457E-4 0.0 0.13031378381164135 0.0011043541000986556 37 0.0 3.6811803336621855E-4 0.0 0.17326088770436687 0.0011043541000986556 38 0.0 3.6811803336621855E-4 0.0 0.2336322451764267 0.0011043541000986556 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAATAC 110 7.2759576E-12 25.996048 3 TGAACGG 65 4.9332797E-4 20.305851 10 CGCCCCT 120 1.4322723E-8 20.1636 5 TAATACT 145 2.9649527E-10 19.72114 4 CTATACT 125 2.2891982E-8 19.357058 4 TAATACC 70 8.1285264E-4 18.854275 4 GTGTAGA 200 0.0 18.697157 1 GTATCAA 1725 0.0 18.61746 1 CTAGCGG 180 1.4551915E-11 18.335047 29 TACGAAT 180 1.4551915E-11 18.333921 41 GTGCTAT 120 3.1638774E-7 18.330547 1 CGCCGGT 180 1.4551915E-11 18.330547 7 TAAGACC 120 3.1638774E-7 18.330547 4 CGTCGTA 195 1.8189894E-12 18.049646 10 AGACCGT 75 0.0012916966 17.597324 6 TAGGACG 150 9.600626E-9 17.597324 4 TCTATAC 100 2.4846473E-5 17.597324 3 CGCAATA 190 3.274181E-11 17.371109 36 TCTAGCG 190 3.274181E-11 17.370045 28 GACGTGA 115 4.2756237E-6 17.214773 7 >>END_MODULE