##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063997_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1018119 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.239861941482282 32.0 32.0 32.0 32.0 32.0 2 31.396408474844296 32.0 32.0 32.0 32.0 32.0 3 31.485421645210433 32.0 32.0 32.0 32.0 32.0 4 31.56816737532646 32.0 32.0 32.0 32.0 32.0 5 31.51884995761792 32.0 32.0 32.0 32.0 32.0 6 35.095762872512935 36.0 36.0 36.0 36.0 36.0 7 35.11889278168859 36.0 36.0 36.0 36.0 36.0 8 35.074094482079204 36.0 36.0 36.0 36.0 36.0 9 35.179221682337726 36.0 36.0 36.0 36.0 36.0 10 35.0364446592196 36.0 36.0 36.0 36.0 36.0 11 35.18426529708217 36.0 36.0 36.0 36.0 36.0 12 35.103047875543034 36.0 36.0 36.0 36.0 36.0 13 35.12752045684247 36.0 36.0 36.0 36.0 36.0 14 35.08063595709343 36.0 36.0 36.0 36.0 36.0 15 35.054174413796424 36.0 36.0 36.0 36.0 36.0 16 35.06778873589433 36.0 36.0 36.0 36.0 36.0 17 35.034341761621185 36.0 36.0 36.0 36.0 36.0 18 35.03321517425763 36.0 36.0 36.0 36.0 36.0 19 35.026955591635165 36.0 36.0 36.0 36.0 36.0 20 35.01412703230172 36.0 36.0 36.0 36.0 36.0 21 35.006036622438046 36.0 36.0 36.0 36.0 36.0 22 34.99332396311237 36.0 36.0 36.0 36.0 36.0 23 34.942643247007474 36.0 36.0 36.0 36.0 36.0 24 34.922828274494435 36.0 36.0 36.0 36.0 36.0 25 34.898252561832166 36.0 36.0 36.0 32.0 36.0 26 34.8408545562945 36.0 36.0 36.0 32.0 36.0 27 34.83115726157748 36.0 36.0 36.0 32.0 36.0 28 34.7996992493019 36.0 36.0 36.0 32.0 36.0 29 34.778875553839974 36.0 36.0 36.0 32.0 36.0 30 34.762606335801614 36.0 36.0 36.0 32.0 36.0 31 34.74086526231216 36.0 36.0 36.0 32.0 36.0 32 34.7057888125062 36.0 36.0 36.0 32.0 36.0 33 34.66684640989904 36.0 36.0 36.0 32.0 36.0 34 34.653354863233076 36.0 36.0 36.0 32.0 36.0 35 34.599230541812894 36.0 36.0 36.0 32.0 36.0 36 34.569310660148766 36.0 36.0 36.0 32.0 36.0 37 34.54900458590794 36.0 36.0 36.0 32.0 36.0 38 34.510620074863546 36.0 36.0 36.0 32.0 36.0 39 34.490800191333236 36.0 36.0 36.0 32.0 36.0 40 34.459946234182844 36.0 36.0 36.0 32.0 36.0 41 34.43542552491408 36.0 36.0 36.0 32.0 36.0 42 34.36149114199814 36.0 36.0 36.0 32.0 36.0 43 34.32808640247358 36.0 36.0 36.0 32.0 36.0 44 34.26320204219743 36.0 36.0 36.0 32.0 36.0 45 34.21217657267962 36.0 36.0 36.0 32.0 36.0 46 34.17687912709614 36.0 36.0 36.0 32.0 36.0 47 34.12847614080476 36.0 36.0 36.0 32.0 36.0 48 34.06324408050532 36.0 36.0 36.0 32.0 36.0 49 34.02757045099836 36.0 36.0 36.0 32.0 36.0 50 33.47088798067809 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 2.0 20 15.0 21 35.0 22 123.0 23 306.0 24 873.0 25 1955.0 26 4098.0 27 7476.0 28 12694.0 29 18723.0 30 26673.0 31 37070.0 32 53045.0 33 83252.0 34 170769.0 35 601008.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.80079723541234 18.48356315900112 12.310882518776681 25.40475708680986 2 15.200821910273485 21.008313394544434 38.26636650440618 25.5244981907759 3 17.77255025218173 25.7434572715263 29.27390324275745 27.210089233534525 4 11.582830690714935 16.666715776839446 36.9790761197856 34.771377412660016 5 13.321330807106047 38.231581966351676 33.77355692212796 14.673530304414317 6 32.542590964674915 37.140598066033796 17.386149894658264 12.930661074633024 7 29.122627119226728 31.35645243827097 21.29181362885871 18.229106813643593 8 27.798223979711604 33.53429216034668 19.677071147871715 18.990412712070004 9 27.63919242121392 13.991484178940286 18.679703959807682 39.68961944003811 10 15.213701574105542 27.731798974955357 32.551453587165135 24.503045863773963 11 36.40923743613216 21.592880196598035 22.95500128668779 19.042881080582013 12 24.153487120353436 24.367411243097557 30.040722195266166 21.438379441282837 13 29.5225579086015 20.28841592239761 25.87551676483848 24.313509404162406 14 23.255035040245943 20.01355446094007 26.615166263143163 30.116244235670823 15 24.766472641692907 27.867205195652218 23.473354798532927 23.892967364121947 16 24.663937437261445 26.468254046207008 24.92441907291325 23.943389443618297 17 23.155446465491757 26.35654574759925 26.17041819276529 24.31758959414371 18 23.625153961147767 25.75693881038862 27.53119984598974 23.086707382473868 19 24.845818612559043 25.53954891324099 26.611918646052178 23.00271382814779 20 25.135176281657767 24.753588739975346 26.515766882915976 23.595468095450904 21 26.278657013571106 24.582686306806963 25.707702144837686 23.43095453478424 22 24.99658684299183 24.913099549266835 26.24978023197681 23.840533375764522 23 24.004427821017025 24.78420756933449 26.51457409233598 24.696790517312508 24 23.925634973720992 25.62377653561049 26.42977744120741 24.02081104946111 25 24.297042209389925 25.1064001155103 26.46551241490201 24.131045260197762 26 23.740620650432536 25.746296145319388 26.933847775329767 23.579235428918306 27 24.415035366528066 25.598274353103424 26.078897660534373 23.907792619834133 28 23.714114803162445 25.368514831451183 26.759770664775512 24.15759970061086 29 23.87676924436936 25.45295602549873 26.539402213949653 24.130872516182265 30 23.79761059330483 25.693243241915887 26.82989597054054 23.679250194238747 31 24.136992787113265 25.570336696334817 26.124539433165133 24.168131083386786 32 23.771263105577372 25.689780154369313 26.17952651957905 24.359430220474266 33 23.703136909766695 25.18731484610126 26.47956136697601 24.629986877156036 34 24.121222955511833 25.555082993563445 26.54291217582711 23.78078187509761 35 24.814824637138795 25.237086345103428 26.377949275554496 23.570139742203285 36 23.81960379078393 26.158982680580877 26.008596844156664 24.01281668447853 37 24.48348954209975 26.0725560416548 25.801850931457388 23.642103484788063 38 23.89676955462151 25.91035850507793 26.200034772939578 23.99283716736098 39 24.29012321425765 25.659290575052257 26.04286174543054 24.007724465259553 40 24.614499096839086 25.966244667716342 26.032741670440068 23.386514565004504 41 23.782764913769565 26.1320752863707 26.426058309415907 23.65910149044383 42 24.631370715531737 26.426879194103503 25.832730901604563 23.109019188760197 43 23.975546702497976 25.643942072715557 26.091342338307282 24.28916888647918 44 23.716708983847443 26.054188909788284 25.790856542301626 24.438245564062647 45 23.99725371867707 26.29642944139302 25.68215035006247 24.02416648986744 46 23.80488868546104 26.120757563554285 25.53083863566269 24.54351511532198 47 24.121222955511833 26.03951906067336 25.84896634976638 23.99029163404843 48 24.473575131569383 26.4005091867745 25.112710614147616 24.0132050675085 49 23.878049139831944 26.475692824484465 25.588072074372736 24.058185961310855 50 23.941318487465942 26.701934769071194 25.221047710159844 24.135699033303016 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 26.0 1 26.5 2 27.0 3 79.0 4 131.0 5 164.0 6 197.0 7 218.0 8 239.0 9 355.5 10 472.0 11 695.0 12 918.0 13 1703.5 14 2489.0 15 3441.0 16 4393.0 17 4890.5 18 5388.0 19 5401.0 20 5414.0 21 5748.5 22 6083.0 23 6829.5 24 7576.0 25 7700.0 26 7824.0 27 9471.5 28 11119.0 29 13337.0 30 15555.0 31 17740.5 32 19926.0 33 23420.5 34 26915.0 35 30652.5 36 34390.0 37 39186.5 38 43983.0 39 46939.0 40 49895.0 41 53521.0 42 57147.0 43 58640.5 44 60134.0 45 65415.5 46 70697.0 47 73752.0 48 76807.0 49 78229.0 50 79651.0 51 77105.0 52 74559.0 53 71946.0 54 69333.0 55 67236.0 56 65139.0 57 62531.5 58 59924.0 59 53545.0 60 47166.0 61 41223.5 62 35281.0 63 30095.5 64 24910.0 65 21084.5 66 17259.0 67 14796.0 68 12333.0 69 10877.5 70 9422.0 71 7410.5 72 5399.0 73 4565.0 74 3731.0 75 2924.5 76 2118.0 77 1867.0 78 1616.0 79 1328.0 80 1040.0 81 837.0 82 634.0 83 528.5 84 423.0 85 306.5 86 190.0 87 150.5 88 111.0 89 76.0 90 41.0 91 37.5 92 34.0 93 29.5 94 25.0 95 22.5 96 20.0 97 15.5 98 11.0 99 7.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009920254901440793 2 2.946610366764593E-4 3 3.92881382235279E-4 4 0.0 5 0.0 6 3.92881382235279E-4 7 0.0 8 0.0 9 0.0013750848378234766 10 0.0016697458744999358 11 9.822034555881975E-5 12 9.822034555881975E-5 13 5.893220733529186E-4 14 3.92881382235279E-4 15 0.0036341527856763307 16 4.911017277940987E-4 17 0.0 18 4.911017277940987E-4 19 0.0 20 3.92881382235279E-4 21 0.0 22 0.0 23 0.0010804238011470173 24 5.893220733529186E-4 25 0.002750169675646953 26 0.005696780042411546 27 0.006482542806882104 28 0.004518135895705709 29 0.002848390021205773 30 0.0041252545134704294 31 0.00785762764470558 32 0.00402703416791161 33 0.004616356241264529 34 0.002750169675646953 35 0.0029466103667645923 36 0.006973644534676202 37 0.0036341527856763307 38 0.008446949718058499 39 0.005402119005735086 40 0.002750169675646953 41 0.003241271403441052 42 0.0022590679478528544 43 0.0014733051833822962 44 0.0013750848378234766 45 0.0014733051833822962 46 0.0012768644922646567 47 0.002750169675646953 48 0.0024555086389704936 49 3.92881382235279E-4 50 0.0012768644922646567 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1018119.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.97176595108393 #Duplication Level Percentage of deduplicated Percentage of total 1 74.78583574917346 43.35466966507289 2 14.96324119578141 17.348910329429142 3 5.0189415580559364 8.72870715977362 4 2.09603786003509 4.860440649862603 5 1.0005744843642181 2.900253491209447 6 0.5745234806562081 1.9983684452402277 7 0.34183327661775464 1.3871675094463625 8 0.22491401734392968 1.043093021806426 9 0.158350998585531 0.8261898325308744 >10 0.7134039380389496 7.5168215191983165 >50 0.06441841694775768 2.672435150059591 >100 0.05400656748156879 5.838107925488023 >500 0.00357772153400176 1.2926384103860866 >1k 3.4073538419064376E-4 0.2321968904964616 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1185 0.1163911094872014 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1166 0.11452492292158382 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 9.822034555881975E-5 8 0.0 0.0 0.0 0.0 9.822034555881975E-5 9 0.0 0.0 0.0 9.822034555881975E-5 9.822034555881975E-5 10 0.0 0.0 0.0 9.822034555881975E-5 9.822034555881975E-5 11 0.0 0.0 0.0 9.822034555881975E-5 9.822034555881975E-5 12 0.0 0.0 0.0 9.822034555881975E-5 2.946610366764592E-4 13 0.0 0.0 0.0 9.822034555881975E-5 4.911017277940987E-4 14 0.0 0.0 0.0 2.946610366764592E-4 4.911017277940987E-4 15 0.0 0.0 0.0 2.946610366764592E-4 6.875424189117382E-4 16 0.0 0.0 0.0 3.92881382235279E-4 9.822034555881974E-4 17 0.0 0.0 0.0 5.893220733529184E-4 0.0011786441467058369 18 0.0 0.0 0.0 7.85762764470558E-4 0.0011786441467058369 19 0.0 0.0 0.0 8.839831100293777E-4 0.0011786441467058369 20 0.0 0.0 0.0 9.822034555881974E-4 0.0012768644922646567 21 0.0 0.0 0.0 0.0010804238011470173 0.0012768644922646567 22 0.0 0.0 0.0 0.001964406911176395 0.0012768644922646567 23 0.0 0.0 0.0 0.0032412714034410514 0.0012768644922646567 24 0.0 0.0 0.0 0.004419915550146889 0.0012768644922646567 25 0.0 0.0 0.0 0.005107457969058627 0.0012768644922646567 26 0.0 0.0 0.0 0.005893220733529185 0.0012768644922646567 27 0.0 0.0 0.0 0.0074647462624703 0.0014733051833822962 28 0.0 0.0 0.0 0.008839831100293778 0.0014733051833822962 29 0.0 0.0 0.0 0.014143729760470044 0.0014733051833822962 30 0.0 0.0 0.0 0.02298356086076382 0.0014733051833822962 31 0.0 0.0 0.0 0.04056500271579255 0.0014733051833822962 32 0.0 0.0 0.0 0.0611912752831447 0.0016697458744999356 33 0.0 0.0 0.0 0.07847805610149698 0.0016697458744999356 34 0.0 0.0 0.0 0.097532803139908 0.0017679662200587554 35 0.0 0.0 0.0 0.12346297436743642 0.0017679662200587554 36 0.0 0.0 0.0 0.15705433254855278 0.0017679662200587554 37 0.0 0.0 0.0 0.2053787425634921 0.0017679662200587554 38 0.0 0.0 0.0 0.2730525606535189 0.0017679662200587554 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGAAT 130 1.8189894E-12 23.695454 31 CGTAAAC 90 4.0829946E-7 21.9986 40 CCGATTG 80 8.987799E-5 19.24972 9 CTCGCGG 80 8.987799E-5 19.24972 14 ATCCCGT 155 7.203198E-10 18.451345 20 CCAACGA 145 6.3009793E-9 18.207527 29 CGATTGC 85 1.430711E-4 18.117384 10 CAACGAA 195 1.8189894E-12 18.05368 30 GTCGTAA 110 2.7946207E-6 18.000624 38 CCCGTTT 160 1.1004886E-9 17.87474 22 CGTGATT 100 2.481651E-5 17.600609 28 TCGCGGC 75 0.0012908066 17.599745 15 ACGAACG 100 2.4826988E-5 17.599745 15 GTATAGA 125 4.851354E-7 17.599743 1 AATCCCG 150 9.598807E-9 17.59888 19 GTACCGA 90 2.216016E-4 17.110022 6 GTGTATA 365 0.0 16.876467 1 TTAAGGG 105 3.7754584E-5 16.76084 3 GTATCAA 3275 0.0 16.592125 1 GTATTAG 240 0.0 16.49976 1 >>END_MODULE