##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063996_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1067938 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.330765456421627 32.0 32.0 32.0 32.0 32.0 2 31.416130898984772 32.0 32.0 32.0 32.0 32.0 3 31.47664564796833 32.0 32.0 32.0 32.0 32.0 4 31.55472415065294 32.0 32.0 32.0 32.0 32.0 5 31.50859038633329 32.0 32.0 32.0 32.0 32.0 6 35.095543936071195 36.0 36.0 36.0 36.0 36.0 7 35.121611928782386 36.0 36.0 36.0 36.0 36.0 8 35.067517028142085 36.0 36.0 36.0 36.0 36.0 9 35.166088293515166 36.0 36.0 36.0 36.0 36.0 10 35.028551282939645 36.0 36.0 36.0 36.0 36.0 11 35.16464907138804 36.0 36.0 36.0 36.0 36.0 12 35.07190024139978 36.0 36.0 36.0 36.0 36.0 13 35.111288295762485 36.0 36.0 36.0 36.0 36.0 14 35.0592824677088 36.0 36.0 36.0 36.0 36.0 15 35.03086040575389 36.0 36.0 36.0 36.0 36.0 16 35.05161910148342 36.0 36.0 36.0 36.0 36.0 17 35.01267957503151 36.0 36.0 36.0 36.0 36.0 18 35.00598255703983 36.0 36.0 36.0 36.0 36.0 19 35.00943500465383 36.0 36.0 36.0 36.0 36.0 20 34.99183192282698 36.0 36.0 36.0 36.0 36.0 21 34.98831954664035 36.0 36.0 36.0 36.0 36.0 22 34.97194219140062 36.0 36.0 36.0 36.0 36.0 23 34.936519723055085 36.0 36.0 36.0 36.0 36.0 24 34.89902690980188 36.0 36.0 36.0 32.0 36.0 25 34.8665877607127 36.0 36.0 36.0 32.0 36.0 26 34.82252715045255 36.0 36.0 36.0 32.0 36.0 27 34.805565491629665 36.0 36.0 36.0 32.0 36.0 28 34.78227387732247 36.0 36.0 36.0 32.0 36.0 29 34.76032691036371 36.0 36.0 36.0 32.0 36.0 30 34.74052238987657 36.0 36.0 36.0 32.0 36.0 31 34.74124059636421 36.0 36.0 36.0 32.0 36.0 32 34.688967898885515 36.0 36.0 36.0 32.0 36.0 33 34.67435188185082 36.0 36.0 36.0 32.0 36.0 34 34.66539911492989 36.0 36.0 36.0 32.0 36.0 35 34.6113735067017 36.0 36.0 36.0 32.0 36.0 36 34.59747382338675 36.0 36.0 36.0 32.0 36.0 37 34.58022282192412 36.0 36.0 36.0 32.0 36.0 38 34.54443703660699 36.0 36.0 36.0 32.0 36.0 39 34.53764825298847 36.0 36.0 36.0 32.0 36.0 40 34.51592601817708 36.0 36.0 36.0 32.0 36.0 41 34.5103947981999 36.0 36.0 36.0 32.0 36.0 42 34.43457953551611 36.0 36.0 36.0 32.0 36.0 43 34.440526509965935 36.0 36.0 36.0 32.0 36.0 44 34.36292743586238 36.0 36.0 36.0 32.0 36.0 45 34.33666092975435 36.0 36.0 36.0 32.0 36.0 46 34.295398234728985 36.0 36.0 36.0 32.0 36.0 47 34.270545668381494 36.0 36.0 36.0 32.0 36.0 48 34.21908387940124 36.0 36.0 36.0 32.0 36.0 49 34.2052179059084 36.0 36.0 36.0 32.0 36.0 50 33.61350565294989 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 0.0 18 0.0 19 1.0 20 4.0 21 26.0 22 95.0 23 339.0 24 762.0 25 1842.0 26 3891.0 27 7137.0 28 11972.0 29 18594.0 30 26694.0 31 38559.0 32 55681.0 33 89774.0 34 185640.0 35 626926.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.581649279868145 17.936620905362126 11.512745116401026 26.968984698368697 2 16.233025636415736 19.796541733852465 37.50681221873261 26.463620410999184 3 18.586694333742845 23.713593323944508 29.1449113055464 28.554801036766246 4 12.174489530291083 16.057673760087194 36.918622616668756 34.84921409295296 5 14.16814459266362 36.73181401916591 33.50147667748502 15.598564710685453 6 33.35496382277231 36.97474663767619 16.49245227012455 13.177837269426943 7 29.68880215892683 30.85019916886561 20.1948053164135 19.266193355794062 8 28.223454919667624 33.365232813140835 18.84659970897187 19.56471255821967 9 28.449496406111297 13.418183316415774 17.9699117165641 40.16240856090883 10 16.691559083047654 26.22927179615873 31.020788835212826 26.058380285580785 11 37.9940595802378 20.602319610314456 22.66629710713543 18.737323702312306 12 24.479438316823245 23.751115472599874 29.366261741139194 22.40318446943769 13 29.930435710854518 19.43586348581793 25.08715434395229 25.546546459375257 14 23.607803845739674 20.46182586018812 24.24810498766311 31.682265306409096 15 25.885843085512338 27.20846236612506 22.103492804909912 24.802201743452688 16 25.994050166256372 25.83514447121485 23.671611127706054 24.499194234822728 17 24.019840103077144 25.89654081042158 24.87859782122183 25.20502126527944 18 24.474406706019835 24.96629011476343 26.684183321847005 23.875119857369732 19 26.94894272888501 24.05420539394609 24.451887656399528 24.54496422076937 20 25.493500984614176 24.30859297089419 25.06613254976211 25.131773494729526 21 27.887573997741445 22.533986055370256 24.069093898709475 25.509346048178827 22 25.588213536940852 24.52110939128432 24.79912204558883 25.091555026186 23 24.748110359499893 24.545006779483263 25.757354428388428 24.94952843262842 24 25.401312629163066 25.30617557468493 24.280268518717936 25.01224327743407 25 24.826719554424386 24.669030135159684 25.07617597539895 25.428074335016976 26 24.943018262248966 25.08142254884885 25.390163369498243 24.585395819403942 27 26.43615731172515 24.101128698611344 24.54313130755047 24.919582682113035 28 24.211789008823917 25.08107085634984 25.40703984387949 25.30010029094675 29 25.517366664544138 24.078478670447268 24.57365241200553 25.83050225300307 30 23.797189798622522 25.627706843837643 26.37843608219909 24.19666727534074 31 25.870258202508982 23.857698315484285 25.216604672592624 25.05543880941411 32 25.22937498010117 24.934216810156737 24.152403497699225 25.684004712042864 33 24.476653428686742 24.138883608471684 25.005922911319267 26.378540051522304 34 25.160875883974587 24.45650545367374 25.09588876902793 25.286729893323745 35 25.930066944031644 24.125977262064954 25.62301773469038 24.32093805921302 36 24.430403928597517 25.23181834356874 24.773706714912603 25.564071012921147 37 25.673680100158908 24.40446370129122 24.428342274532426 25.493513924017442 38 25.022381546368194 24.910473814527215 25.266892916942922 24.800251722161665 39 26.463295183622403 24.203435159537708 23.911085141090254 25.42218451574963 40 25.822705867260225 24.999133821327472 24.937143520655784 24.241016790756515 41 25.258613828009047 24.703320988290155 25.387089675579755 24.65097550812104 42 26.38383622727941 25.655222914846536 24.00903064745547 23.951910210418582 43 25.382263569666126 24.208387371654112 25.03064382464897 25.378705234030797 44 24.34746862586828 25.140038841933553 24.643558775111945 25.86893375708622 45 25.222769495842385 24.846055884335904 24.865626638699528 25.065547981122183 46 25.447948123697827 24.609312451717116 24.810543811597256 25.1321956129878 47 25.44680731522319 24.7728741186055 24.493543463400474 25.286775102770832 48 25.59796313758466 25.7213809687457 23.91758910102564 24.763066792643997 49 25.131234701769962 25.23582918045497 24.432970576833398 25.199965540941673 50 24.816279749196575 25.666805252788578 24.1889902690069 25.32792472900795 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 21.0 1 20.5 2 20.0 3 47.5 4 75.0 5 97.0 6 119.0 7 119.5 8 120.0 9 165.5 10 211.0 11 323.5 12 436.0 13 788.0 14 1140.0 15 1646.5 16 2153.0 17 2346.5 18 2540.0 19 2517.5 20 2495.0 21 2697.5 22 2900.0 23 3144.0 24 3388.0 25 3729.5 26 4071.0 27 5269.5 28 6468.0 29 8041.5 30 9615.0 31 11754.5 32 13894.0 33 17565.5 34 21237.0 35 25061.5 36 28886.0 37 33189.5 38 37493.0 39 39693.5 40 41894.0 41 46821.0 42 51748.0 43 55015.5 44 58283.0 45 63890.5 46 69498.0 47 74824.0 48 80150.0 49 84059.5 50 87969.0 51 90884.5 52 93800.0 53 91415.0 54 89030.0 55 87301.5 56 85573.0 57 80661.0 58 75749.0 59 68513.5 60 61278.0 61 52990.5 62 44703.0 63 37169.0 64 29635.0 65 25639.0 66 21643.0 67 17338.0 68 13033.0 69 11709.0 70 10385.0 71 8001.5 72 5618.0 73 4772.0 74 3926.0 75 3106.0 76 2286.0 77 1977.0 78 1668.0 79 1425.0 80 1182.0 81 942.0 82 702.0 83 586.0 84 470.0 85 344.0 86 218.0 87 157.5 88 97.0 89 72.0 90 47.0 91 36.5 92 26.0 93 21.0 94 16.0 95 17.0 96 18.0 97 11.5 98 5.0 99 5.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007303794789585163 2 3.745535789530853E-4 3 1.8727678947654265E-4 4 0.0 5 0.0 6 9.363839473827133E-5 7 0.0 8 0.0 9 0.0013109375263357986 10 8.427455526444419E-4 11 0.0 12 4.681919736913566E-4 13 4.681919736913566E-4 14 2.80915184214814E-4 15 0.005337388500081465 16 8.427455526444419E-4 17 0.0 18 1.8727678947654265E-4 19 0.0 20 6.554687631678993E-4 21 0.0 22 9.363839473827133E-5 23 9.363839473827132E-4 24 4.681919736913566E-4 25 0.0014982143158123412 26 0.004869196526390109 27 0.006648326026417264 28 0.00421372776322221 29 0.0028091518421481396 30 0.004026450973745667 31 0.008802009105397504 32 0.0033709822105777677 33 0.004775558131651837 34 0.0031837054211012253 35 0.0029027902368864112 36 0.007116518000108621 37 0.003277343815839496 38 0.008802009105397504 39 0.003745535789530853 40 0.0027155134474098684 41 0.0030900670263629536 42 0.0017791295000271553 43 0.0021536830789802403 44 0.0018727678947654265 45 0.0016854911052888838 46 0.0012172991315975272 47 0.002621875052671597 48 0.001966406289503698 49 3.745535789530853E-4 50 9.363839473827132E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1067938.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.37737027145189 #Duplication Level Percentage of deduplicated Percentage of total 1 78.78411575783628 36.538001080101004 2 12.363114067310683 11.467374376157261 3 3.6944953804406446 5.140229406745928 4 1.501147413468773 2.784770777058943 5 0.823186005661704 1.9088601093425166 6 0.5061747242793329 1.408503156597161 7 0.3529376065926406 1.145782264456684 8 0.23743918144347886 0.8809443867803736 9 0.191186948184209 0.7980073098307153 >10 1.18612114067473 11.029234779274013 >50 0.17730312946610335 5.822348081461452 >100 0.16632856669535045 15.279042392968101 >500 0.014622291507681857 4.488555997146718 >1k 0.0018277864384602322 1.308345882079173 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTAAAGGTATAAGGGAGCTTGACTGCGAGAGCTACAACTCGAGCAGGG 2382 0.22304665626656228 No Hit CCCTTATACCTTTACACTCTGCGAATGATTTCCAACCATTCTGAGGGAAC 2128 0.19926250400304138 No Hit CCTTTACACTCTGCGAATGATTTCCAACCATTCTGAGGGAACCTTTGGGC 2012 0.1884004502134019 No Hit GTATAAGGGAGCTTGACTGCGAGAGCTACAACTCGAGCAGGGACGAAAGT 1679 0.15721886476555755 No Hit GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAA 1331 0.12463270339663914 No Hit GTCTCAACGAGAGACTCGGTGAAATTTTAGTACCTGTGAAGATGCAGGTT 1276 0.1194825916860342 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.8727678947654265E-4 13 0.0 0.0 0.0 0.0 3.745535789530853E-4 14 0.0 0.0 0.0 0.0 3.745535789530853E-4 15 0.0 0.0 0.0 9.363839473827133E-5 4.681919736913566E-4 16 0.0 0.0 0.0 9.363839473827133E-5 4.681919736913566E-4 17 0.0 0.0 0.0 9.363839473827133E-5 4.681919736913566E-4 18 0.0 0.0 0.0 9.363839473827133E-5 4.681919736913566E-4 19 0.0 0.0 0.0 9.363839473827133E-5 4.681919736913566E-4 20 0.0 0.0 0.0 9.363839473827133E-5 4.681919736913566E-4 21 0.0 0.0 0.0 9.363839473827133E-5 4.681919736913566E-4 22 0.0 0.0 0.0 2.80915184214814E-4 4.681919736913566E-4 23 0.0 0.0 0.0 4.681919736913566E-4 4.681919736913566E-4 24 0.0 0.0 0.0 0.0015918527105506124 4.681919736913566E-4 25 0.0 0.0 0.0 0.001779129500027155 4.681919736913566E-4 26 0.0 0.0 0.0 0.002060044684241969 4.681919736913566E-4 27 0.0 0.0 0.0 0.002340959868456783 4.681919736913566E-4 28 0.0 0.0 0.0 0.003839174184269124 4.681919736913566E-4 29 0.0 0.0 0.0 0.008614732315920961 4.681919736913566E-4 30 0.0 0.0 0.0 0.01685491105288884 4.681919736913566E-4 31 0.0 0.0 0.0 0.03239888457944188 4.681919736913566E-4 32 0.0 0.0 0.0 0.05075200994814306 4.681919736913566E-4 33 0.0 0.0 0.0 0.06938605050105905 4.681919736913566E-4 34 0.0 0.0 0.0 0.09139107326455281 6.554687631678993E-4 35 0.0 0.0 0.0 0.12041897563341693 6.554687631678993E-4 36 0.0 0.0 0.0 0.15796797192346373 6.554687631678993E-4 37 0.0 0.0 0.0 0.21630469184540677 6.554687631678993E-4 38 0.0 0.0 0.0 0.28737623345175467 6.554687631678993E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATAGG 60 8.018105E-9 32.995785 1 CCTTATA 520 0.0 25.381376 2 CCCTTAT 530 0.0 24.487438 1 CGTATAA 45 0.0013983845 24.443611 44 GTAGGAC 600 0.0 23.09705 3 TATACCT 565 0.0 22.191856 5 GCATACG 50 0.002577246 22.004402 37 TCCGCTA 60 2.8731357E-4 21.999252 44 TCGATTA 50 0.0025814543 21.99822 20 CGCGTAT 50 0.0025814543 21.99822 42 TATATTG 50 0.0025821563 21.99719 5 TAGGACG 600 0.0 21.99719 4 GTATCAA 1845 0.0 21.93758 1 TTATACC 575 0.0 21.80591 4 TGTAGGA 650 0.0 21.320354 2 CCGCACG 375 0.0 21.121258 41 CGCACGA 365 0.0 21.094185 42 ACCTTTA 610 0.0 20.55475 8 GATATAC 225 0.0 20.53071 1 ATACGCG 55 0.0044817296 20.00119 39 >>END_MODULE