##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063995_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 20305 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.338685052942626 32.0 32.0 32.0 32.0 32.0 2 31.436641221374046 32.0 32.0 32.0 32.0 32.0 3 31.48135927111549 32.0 32.0 32.0 32.0 32.0 4 31.58857424279734 32.0 32.0 32.0 32.0 32.0 5 31.537010588524993 32.0 32.0 32.0 32.0 32.0 6 35.10746121644915 36.0 36.0 36.0 36.0 36.0 7 35.10716572272839 36.0 36.0 36.0 36.0 36.0 8 35.084018714602315 36.0 36.0 36.0 36.0 36.0 9 35.119379463186405 36.0 36.0 36.0 36.0 36.0 10 35.03186407288845 36.0 36.0 36.0 36.0 36.0 11 35.19812853976853 36.0 36.0 36.0 36.0 36.0 12 35.09711893622261 36.0 36.0 36.0 36.0 36.0 13 35.1244028564393 36.0 36.0 36.0 36.0 36.0 14 35.05048017729623 36.0 36.0 36.0 36.0 36.0 15 35.035508495444475 36.0 36.0 36.0 36.0 36.0 16 35.010933267668065 36.0 36.0 36.0 36.0 36.0 17 35.04535828613642 36.0 36.0 36.0 36.0 36.0 18 35.009751292785026 36.0 36.0 36.0 36.0 36.0 19 34.98872198965772 36.0 36.0 36.0 36.0 36.0 20 34.99876877616351 36.0 36.0 36.0 36.0 36.0 21 34.962078305836 36.0 36.0 36.0 36.0 36.0 22 34.983452351637524 36.0 36.0 36.0 36.0 36.0 23 34.90199458261512 36.0 36.0 36.0 32.0 36.0 24 34.94449642945087 36.0 36.0 36.0 36.0 36.0 25 34.87146023147008 36.0 36.0 36.0 32.0 36.0 26 34.87909381925634 36.0 36.0 36.0 32.0 36.0 27 34.82999261265698 36.0 36.0 36.0 32.0 36.0 28 34.80344742674218 36.0 36.0 36.0 32.0 36.0 29 34.79295739965526 36.0 36.0 36.0 32.0 36.0 30 34.779906426988425 36.0 36.0 36.0 32.0 36.0 31 34.75065254863334 36.0 36.0 36.0 32.0 36.0 32 34.73341541492243 36.0 36.0 36.0 32.0 36.0 33 34.655257325781825 36.0 36.0 36.0 32.0 36.0 34 34.59960600837232 36.0 36.0 36.0 32.0 36.0 35 34.657178034966755 36.0 36.0 36.0 32.0 36.0 36 34.57197734548141 36.0 36.0 36.0 32.0 36.0 37 34.56503324304359 36.0 36.0 36.0 32.0 36.0 38 34.551440531888694 36.0 36.0 36.0 32.0 36.0 39 34.514257572026594 36.0 36.0 36.0 32.0 36.0 40 34.507165722728395 36.0 36.0 36.0 32.0 36.0 41 34.519724205860626 36.0 36.0 36.0 32.0 36.0 42 34.489682344250184 36.0 36.0 36.0 32.0 36.0 43 34.44841172125092 36.0 36.0 36.0 32.0 36.0 44 34.38749076582123 36.0 36.0 36.0 32.0 36.0 45 34.45407535089879 36.0 36.0 36.0 32.0 36.0 46 34.304457030288106 36.0 36.0 36.0 32.0 36.0 47 34.240827382418125 36.0 36.0 36.0 32.0 36.0 48 34.255454321595664 36.0 36.0 36.0 32.0 36.0 49 34.193154395469094 36.0 36.0 36.0 32.0 36.0 50 33.622408273824185 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 0.0 21 2.0 22 3.0 23 7.0 24 21.0 25 32.0 26 76.0 27 147.0 28 244.0 29 412.0 30 500.0 31 750.0 32 1025.0 33 1635.0 34 3080.0 35 12370.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.73561859732072 19.483845547675337 13.337273443656422 25.44326241134752 2 16.18320610687023 21.26569810391529 37.43905442009357 25.11204136912091 3 17.71484855946811 24.56045309037183 30.115735040630387 27.60896330952967 4 12.459985225313961 17.690224082738244 36.025609455799064 33.82418123614873 5 13.64688500369367 36.78896823442502 34.00147746860379 15.562669293277517 6 32.13986702782566 37.2075843388328 17.217434129524747 13.435114503816795 7 29.91873922679143 31.13026348190101 19.82270376754494 19.128293523762622 8 26.865304112287614 33.31691701551342 21.063777394730362 18.754001477468606 9 27.205121891159813 15.99606008372322 18.68505294262497 38.113765082491994 10 16.104407781334647 27.34794385619306 34.16892391036691 22.37872445210539 11 35.62669293277518 22.462447672986947 23.201181974883035 18.70967741935484 12 23.93006648608717 25.23516375277025 28.574242797340553 22.26052696380202 13 28.948534843634572 21.245998522531394 25.087416892391033 24.718049741442993 14 23.565624230485103 20.408766313715834 26.614134449642947 29.411475006156117 15 25.315208825847122 27.506895193065407 22.0596926713948 25.11820330969267 16 24.796848066978576 27.318394484117213 24.191085939423786 23.693671509480424 17 23.63949766067471 27.633587786259543 25.264713124846093 23.46220142821965 18 22.6791430682098 27.810884018714603 26.372814577690225 23.137158335385376 19 24.860871706476235 26.25461708938685 26.195518345235165 22.68899285890175 20 25.285657998423954 25.295508274231675 26.191883372734438 23.22695035460993 21 25.574981531642454 25.37306082245752 25.983747845358284 23.068209800541737 22 24.663875892637282 26.5845850775671 26.195518345235165 22.556020684560455 23 24.44718049741443 25.944348682590494 26.87022900763359 22.738241812361487 24 25.48140852006895 25.993597636050236 25.417384880571287 23.107608963309527 25 24.731553541523002 25.204413358289823 26.568810954585754 23.495222145601417 26 24.70570851598286 25.59227700339851 26.109441954390977 23.592572526227652 27 23.833916170024132 26.912278973550706 25.513470915628233 23.740333940796926 28 25.04063438900655 26.07988967147712 25.799142983795498 23.080332955720827 29 24.325256107171 26.457840819542948 25.59594168636722 23.620961386918836 30 24.38675992513053 26.657472170229536 26.5786622007684 22.37710570387154 31 24.49019801004827 25.44576888976455 26.307752930745735 23.756280169441435 32 23.636900950598434 27.16839875880412 24.95690292075063 24.23779736984682 33 23.47783251231527 25.615763546798032 26.290640394088673 24.615763546798032 34 23.443656422379828 26.221434200157606 26.083530338849485 24.25137903861308 35 22.991676106979263 26.78914446140964 26.956607397921488 23.2625720336896 36 25.58368633632154 25.524578859225695 25.88907496798345 23.002659836469313 37 25.09604965028076 25.672347551965323 25.958033691261946 23.27356910649197 38 24.625615763546797 24.822660098522167 26.88177339901478 23.669950738916256 39 23.34745345286179 25.652645059600037 25.80533937543099 25.19456211210718 40 23.385706545830665 26.109441954390977 27.188100280746685 23.31675121903167 41 24.695857755011573 26.375412500615674 25.46914249125745 23.459587253115302 42 24.605988967691093 25.75847123719464 25.87174940898345 23.76379038613081 43 24.67001576044129 25.438337273443658 26.5908195429472 23.30082742316785 44 23.2625720336896 25.656306949711865 26.670935329754226 24.410185686844308 45 23.12352245862884 25.162529550827422 27.433018124507484 24.28092986603625 46 24.21197793538219 25.216706067769895 26.54156816390859 24.02974783293932 47 23.659197242058603 25.579906426988426 27.495690716572273 23.265205614380694 48 23.18262411347518 25.04432624113475 27.654649330181247 24.118400315208827 49 23.64066193853428 25.201930654058312 27.132584712371948 24.02482269503546 50 23.256501182033094 25.940701339637513 26.787825059101657 24.01497241922774 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 1.5 2 1.0 3 3.0 4 5.0 5 6.5 6 8.0 7 8.0 8 8.0 9 11.5 10 15.0 11 12.0 12 9.0 13 27.5 14 46.0 15 50.5 16 55.0 17 49.5 18 44.0 19 42.0 20 40.0 21 54.5 22 69.0 23 82.0 24 95.0 25 132.0 26 169.0 27 167.5 28 166.0 29 237.5 30 309.0 31 346.5 32 384.0 33 425.0 34 466.0 35 528.0 36 590.0 37 678.0 38 766.0 39 922.5 40 1079.0 41 1187.5 42 1296.0 43 1385.5 44 1475.0 45 1640.5 46 1806.0 47 1757.5 48 1709.0 49 1678.0 50 1647.0 51 1660.0 52 1673.0 53 1614.5 54 1556.0 55 1444.0 56 1332.0 57 1201.0 58 1070.0 59 953.0 60 836.0 61 687.0 62 538.0 63 439.0 64 340.0 65 287.0 66 234.0 67 200.0 68 166.0 69 141.0 70 116.0 71 99.0 72 82.0 73 64.5 74 47.0 75 36.0 76 25.0 77 21.0 78 17.0 79 10.5 80 4.0 81 4.0 82 4.0 83 3.0 84 2.0 85 1.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.004924895345973897 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.004924895345973897 16 0.0 17 0.0 18 0.0 19 0.0 20 0.004924895345973897 21 0.0 22 0.0 23 0.0 24 0.0 25 0.014774686037921694 26 0.009849790691947795 27 0.009849790691947795 28 0.009849790691947795 29 0.004924895345973897 30 0.014774686037921694 31 0.014774686037921694 32 0.009849790691947795 33 0.02462447672986949 34 0.004924895345973897 35 0.009849790691947795 36 0.014774686037921694 37 0.014774686037921694 38 0.02462447672986949 39 0.014774686037921694 40 0.009849790691947795 41 0.009849790691947795 42 0.004924895345973897 43 0.004924895345973897 44 0.009849790691947795 45 0.004924895345973897 46 0.004924895345973897 47 0.0 48 0.004924895345973897 49 0.004924895345973897 50 0.004924895345973897 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 20305.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.144053188869734 #Duplication Level Percentage of deduplicated Percentage of total 1 67.64311869250692 37.30115735040631 2 15.682772171117263 17.296232455060327 3 6.778601411092257 11.213986702782567 4 3.3312494418147716 7.347943856193057 5 2.0898454943288383 5.76212755478946 6 1.500401893364294 4.964294508741689 7 0.8395105831919264 3.2405811376508247 8 0.6162364919174779 2.718542230977592 9 0.31258372778422794 1.5513420339817778 >10 1.205680092882022 8.6037921694164 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGT 35 0.17237133710908645 No Hit ACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTTCT 26 0.12804727899532134 RNA PCR Primer, Index 47 (95% over 24bp) GTACATGGGACATCTGGCCCCATGTACCAGCAAAGGGCCTGAGAAGTATA 26 0.12804727899532134 No Hit ATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTT 25 0.12312238364934745 RNA PCR Primer, Index 47 (95% over 22bp) CACTAGGACTGAGGGTTACAAGTTTGAGATCAGCCTGAGTAACTTAGTGA 24 0.11819748830337355 No Hit GATATAGACTGTGCTGACTGGAAGCCCAAGACCTGAGGCAAGATGTGTCC 23 0.11327259295739965 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.004924895345973898 0.0 28 0.0 0.0 0.0 0.004924895345973898 0.0 29 0.0 0.0 0.0 0.014774686037921694 0.0 30 0.0 0.0 0.0 0.02462447672986949 0.0 31 0.0 0.0 0.0 0.10834769761142576 0.0 32 0.0 0.0 0.0 0.17729623245506032 0.0 33 0.0 0.0 0.0 0.241319871952721 0.0 34 0.0 0.0 0.0 0.2954937207584339 0.0 35 0.0 0.0 0.0 0.34474267421817284 0.0 36 0.0 0.0 0.0 0.4432405811376508 0.0 37 0.0 0.0 0.0 0.6205368135927112 0.0 38 0.0 0.0 0.0 0.7978330460477715 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGTA 25 0.0022988922 35.2 31 GTATCAA 40 1.7339506E-5 33.0 1 CAGGGCT 30 0.0056146528 29.333332 4 TATCAAC 50 7.951923E-5 26.4 2 AACGCAG 65 4.7064223E-4 20.307692 6 CAACGCA 65 4.7064223E-4 20.307692 5 TCAACGC 70 7.754016E-4 18.857143 4 ATCAACG 70 7.754016E-4 18.857143 3 ACGCAGA 80 0.001899169 16.5 7 AGAGTAC 80 0.001899169 16.5 11 CGCAGAG 80 0.001899169 16.5 8 CAGAGTA 85 0.0028471889 15.529412 10 GCAGAGT 90 0.0041661398 14.666668 9 >>END_MODULE