##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063992_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1416412 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30865595603539 32.0 32.0 32.0 32.0 32.0 2 31.390130131628368 32.0 32.0 32.0 32.0 32.0 3 31.47345758155113 32.0 32.0 32.0 32.0 32.0 4 31.552732538272764 32.0 32.0 32.0 32.0 32.0 5 31.499325761148594 32.0 32.0 32.0 32.0 32.0 6 35.09666043495819 36.0 36.0 36.0 36.0 36.0 7 35.104725884841415 36.0 36.0 36.0 36.0 36.0 8 35.053483026125164 36.0 36.0 36.0 36.0 36.0 9 35.168570302990936 36.0 36.0 36.0 36.0 36.0 10 35.011956266961874 36.0 36.0 36.0 36.0 36.0 11 35.15846801636812 36.0 36.0 36.0 36.0 36.0 12 35.06341375249574 36.0 36.0 36.0 36.0 36.0 13 35.10942720056029 36.0 36.0 36.0 36.0 36.0 14 35.05011606792374 36.0 36.0 36.0 36.0 36.0 15 35.02456700451564 36.0 36.0 36.0 36.0 36.0 16 35.037897871523256 36.0 36.0 36.0 36.0 36.0 17 34.998029528131646 36.0 36.0 36.0 36.0 36.0 18 34.997025582951856 36.0 36.0 36.0 36.0 36.0 19 34.991752399725506 36.0 36.0 36.0 36.0 36.0 20 34.98650675086063 36.0 36.0 36.0 36.0 36.0 21 34.98030657746475 36.0 36.0 36.0 36.0 36.0 22 34.96878309418446 36.0 36.0 36.0 36.0 36.0 23 34.91670573251286 36.0 36.0 36.0 32.0 36.0 24 34.87743608498092 36.0 36.0 36.0 32.0 36.0 25 34.85528716220986 36.0 36.0 36.0 32.0 36.0 26 34.796585315572024 36.0 36.0 36.0 32.0 36.0 27 34.7933616772521 36.0 36.0 36.0 32.0 36.0 28 34.771495158188436 36.0 36.0 36.0 32.0 36.0 29 34.73157245208315 36.0 36.0 36.0 32.0 36.0 30 34.71377113438745 36.0 36.0 36.0 32.0 36.0 31 34.7163445381711 36.0 36.0 36.0 32.0 36.0 32 34.66777604256389 36.0 36.0 36.0 32.0 36.0 33 34.65295337797195 36.0 36.0 36.0 32.0 36.0 34 34.63840182093911 36.0 36.0 36.0 32.0 36.0 35 34.60532175666402 36.0 36.0 36.0 32.0 36.0 36 34.57707926789663 36.0 36.0 36.0 32.0 36.0 37 34.5735711078415 36.0 36.0 36.0 32.0 36.0 38 34.52613505110095 36.0 36.0 36.0 32.0 36.0 39 34.52083574553167 36.0 36.0 36.0 32.0 36.0 40 34.50552099247959 36.0 36.0 36.0 32.0 36.0 41 34.48914157745063 36.0 36.0 36.0 32.0 36.0 42 34.42439276142817 36.0 36.0 36.0 32.0 36.0 43 34.41259817058879 36.0 36.0 36.0 32.0 36.0 44 34.34354411004708 36.0 36.0 36.0 32.0 36.0 45 34.32440490478759 36.0 36.0 36.0 32.0 36.0 46 34.28942355755246 36.0 36.0 36.0 32.0 36.0 47 34.27556883166762 36.0 36.0 36.0 32.0 36.0 48 34.23338830792171 36.0 36.0 36.0 32.0 36.0 49 34.212983934053085 36.0 36.0 36.0 32.0 36.0 50 33.612929006532 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 0.0 19 4.0 20 10.0 21 39.0 22 154.0 23 451.0 24 1157.0 25 2582.0 26 5399.0 27 9820.0 28 16160.0 29 24595.0 30 36026.0 31 51092.0 32 74116.0 33 119385.0 34 249426.0 35 825993.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.71296636258367 17.803259242522664 11.713785409664755 26.76998898522891 2 16.201109430013915 20.196935476696957 36.68948738459323 26.912467708695903 3 18.31264243817442 24.031702819252136 28.651429959248915 29.004224783324535 4 12.459863373086362 15.83508188295496 35.59232765607747 36.11272708788121 5 14.528470529761114 36.66412032657165 33.224019564928845 15.583389578738391 6 34.59410382170687 35.32418955259392 16.541126186009834 13.540580439689384 7 30.467286684443994 30.17062138037618 20.73402423449126 18.62806770068857 8 28.304405780239083 32.960254502221105 19.08484254581294 19.650497171726872 9 27.77021946561517 13.732186289841463 18.154328418273153 40.34326582627021 10 16.079426715617057 26.57427280429257 31.360067777463996 25.986232702626378 11 37.789428499617344 20.620624507558535 22.320341821447432 19.26960517137669 12 25.006742398034465 23.242069739694017 28.61819670858014 23.132991153691375 13 29.980401044336286 19.118795370240935 25.019803699797095 25.880999885625688 14 23.867504184884712 19.253999733127554 24.799016102010228 32.079479979977506 15 25.396956519590297 27.139971433392713 21.843922959122075 25.619149087894915 16 26.01699659912694 25.273916073202436 23.57573879148631 25.133348536184315 17 24.46463317170428 25.592059372555443 24.81064831419107 25.13265914154921 18 25.201460029228823 24.563932759582325 25.866592300252044 24.368014910936804 19 26.16258546242195 24.31135855951517 24.92339799436887 24.60265798369401 20 26.34620367422122 23.862528408108112 24.602498289688924 25.18876962798175 21 27.17126090431315 23.763001160679238 24.051052942223023 25.014684992784588 22 26.42610543557303 23.957540542639492 24.493331733043398 25.123022288744078 23 24.852019621520412 23.773584372820185 25.111903101092626 26.262492904566777 24 25.31659332381159 24.366301493850283 24.976860464541616 25.340244717796512 25 25.300253815170308 24.030330736346404 25.02702301987101 25.642392428612276 26 25.009160929465434 24.743617532783418 25.298356822262434 24.948864715488714 27 25.581727025162692 24.442525574666586 24.582816450534935 25.39293094963579 28 25.052952639159535 24.3158519020588 25.203408737891497 25.42778672089017 29 24.994281179573786 24.42917699819822 25.05471710901625 25.521824713211743 30 24.840947361360676 24.579431004232696 25.32288868256899 25.25673295183764 31 25.612839498502098 24.30112750182339 24.417273816525537 25.66875918314897 32 25.352838594435067 24.527206873910064 24.31793952145273 25.802015010202133 33 24.889257598757368 24.20305715395206 24.961414904508068 25.94627034278251 34 25.654259153485697 24.27171373642395 25.081175650764308 24.99285145932604 35 26.113374330153842 24.16642543968031 24.944400121437198 24.775800108728653 36 25.027589863875882 24.677165054110027 24.690509863508726 25.604735218505365 37 25.764355854036697 24.438982854593057 24.501043522956092 25.295617768414157 38 25.0951593190469 24.471072343676415 24.922880529601944 25.510887807674738 39 25.83289852995272 24.15675797419986 24.419405104250437 25.590938391596985 40 26.05106568048507 24.380600576684657 24.84262608975608 24.725707653074192 41 25.14203692995481 24.64166873182397 25.137659502512435 25.078634835708797 42 26.108754175236005 24.836291211370902 24.62709697279063 24.42785764060246 43 25.25326692982376 24.063200062694552 25.072596479361987 25.610936528119705 44 25.03041175718886 24.64923223992211 24.51035835393143 25.8099976489576 45 25.18012328516631 24.854365778940984 24.648631627848523 25.316879308044175 46 25.091128854046275 24.301945564850634 24.736427042906634 25.870498538196458 47 25.4245150139687 24.3092077626006 25.016573930319595 25.249703293111104 48 25.9217133206814 24.798147959875287 24.179177398219693 25.100961321223625 49 25.202184403472174 24.848613214440785 24.397894669956685 25.551307712130356 50 25.216642308968574 25.268322990136898 24.30262851333319 25.21240618756134 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13.0 1 17.0 2 21.0 3 75.5 4 130.0 5 174.0 6 218.0 7 190.5 8 163.0 9 241.5 10 320.0 11 435.0 12 550.0 13 1123.0 14 1696.0 15 2185.5 16 2675.0 17 2867.5 18 3060.0 19 2994.5 20 2929.0 21 3298.5 22 3668.0 23 4257.5 24 4847.0 25 5796.0 26 6745.0 27 8511.0 28 10277.0 29 12469.5 30 14662.0 31 17050.5 32 19439.0 33 23499.5 34 27560.0 35 32574.0 36 37588.0 37 43730.0 38 49872.0 39 54150.0 40 58428.0 41 63745.5 42 69063.0 43 71892.0 44 74721.0 45 82407.5 46 90094.0 47 96759.0 48 103424.0 49 107440.5 50 111457.0 51 109088.0 52 106719.0 53 106224.5 54 105730.0 55 105731.5 56 105733.0 57 103527.0 58 101321.0 59 92588.0 60 83855.0 61 73422.0 62 62989.0 63 55239.0 64 47489.0 65 40465.5 66 33442.0 67 28739.5 68 24037.0 69 21668.0 70 19299.0 71 15182.0 72 11065.0 73 9561.0 74 8057.0 75 6317.0 76 4577.0 77 3965.0 78 3353.0 79 2791.5 80 2230.0 81 1766.0 82 1302.0 83 1070.0 84 838.0 85 605.5 86 373.0 87 261.0 88 149.0 89 118.5 90 88.0 91 68.5 92 49.0 93 42.5 94 36.0 95 33.0 96 30.0 97 23.0 98 16.0 99 15.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009319322344063734 2 6.354083416407091E-4 3 5.648074147917414E-4 4 0.0 5 0.0 6 2.1180278054690305E-4 7 7.060092684896767E-5 8 0.0 9 0.0012002157564324505 10 8.472111221876122E-4 11 0.0 12 1.4120185369793535E-4 13 7.060092684896767E-4 14 3.5300463424483837E-4 15 0.00515386765997464 16 7.766101953386444E-4 17 0.0 18 1.4120185369793535E-4 19 0.0 20 2.1180278054690305E-4 21 0.0 22 1.4120185369793535E-4 23 5.648074147917414E-4 24 3.5300463424483837E-4 25 0.0019062250249221272 26 0.005012665806276705 27 0.00487146395257877 28 0.0036712481961463186 29 0.0025416333665628362 30 0.004024252830391158 31 0.00670708805065193 32 0.0029652389276566423 33 0.004377257464635995 34 0.002753436147109739 35 0.0029652389276566423 36 0.009248721417214766 37 0.00395365190354219 38 0.007271895465443669 39 0.004447858391484963 40 0.002824037073958707 41 0.003883050976693222 42 0.0017650231712241918 43 0.0014826194638283211 44 0.0013414176101303858 45 0.0014826194638283211 46 7.766101953386444E-4 47 0.0021886287323179977 48 0.001976825951771095 49 4.942064879427737E-4 50 0.0015532203906772888 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1416412.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.95028062457499 #Duplication Level Percentage of deduplicated Percentage of total 1 80.03313720452128 46.379427602671214 2 12.035298931176417 13.948979009246418 3 3.3892332694890834 5.8922105720711455 4 1.4396650696553928 3.337159791677133 5 0.7711528608597609 2.2344262345633488 6 0.4768109228148348 1.6578796069189345 7 0.3257043765461468 1.3212262015051017 8 0.24641890419440773 1.1424035719412953 9 0.18062314203015895 0.9420445591146159 >10 0.9706256056383311 9.943126842460645 >50 0.06440255460718541 2.6028365043991997 >100 0.058959690461881056 7.074597374616013 >500 0.006619127265722836 2.5817084016404923 >1k 0.0013483407393139108 0.9419737271744275 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1429 0.10088872446717481 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.060092684896767E-5 2 0.0 0.0 0.0 0.0 7.060092684896767E-5 3 0.0 0.0 0.0 7.060092684896767E-5 7.060092684896767E-5 4 0.0 0.0 0.0 7.060092684896767E-5 7.060092684896767E-5 5 0.0 0.0 0.0 7.060092684896767E-5 7.060092684896767E-5 6 0.0 0.0 0.0 7.060092684896767E-5 7.060092684896767E-5 7 0.0 0.0 0.0 7.060092684896767E-5 7.060092684896767E-5 8 0.0 0.0 0.0 7.060092684896767E-5 7.060092684896767E-5 9 0.0 0.0 0.0 1.4120185369793535E-4 7.060092684896767E-5 10 0.0 0.0 0.0 1.4120185369793535E-4 7.060092684896767E-5 11 0.0 0.0 0.0 1.4120185369793535E-4 7.060092684896767E-5 12 0.0 0.0 0.0 1.4120185369793535E-4 4.2360556109380604E-4 13 0.0 0.0 0.0 1.4120185369793535E-4 4.2360556109380604E-4 14 0.0 0.0 0.0 1.4120185369793535E-4 4.942064879427737E-4 15 0.0 0.0 0.0 1.4120185369793535E-4 5.648074147917414E-4 16 0.0 0.0 0.0 2.1180278054690302E-4 5.648074147917414E-4 17 0.0 0.0 0.0 2.824037073958707E-4 5.648074147917414E-4 18 0.0 0.0 0.0 3.5300463424483837E-4 7.060092684896767E-4 19 0.0 0.0 0.0 4.2360556109380604E-4 7.060092684896767E-4 20 0.0 0.0 0.0 4.942064879427737E-4 8.472111221876121E-4 21 0.0 0.0 0.0 6.354083416407091E-4 8.472111221876121E-4 22 0.0 0.0 0.0 7.766101953386444E-4 9.178120490365798E-4 23 0.0 0.0 0.0 9.884129758855474E-4 9.884129758855474E-4 24 0.0 0.0 0.0 0.0014826194638283211 9.884129758855474E-4 25 0.0 0.0 0.0 0.0018356240980731595 9.884129758855474E-4 26 0.0 0.0 0.0 0.0021886287323179977 9.884129758855474E-4 27 0.0 0.0 0.0 0.0026122342934118037 0.0011296148295834828 28 0.0 0.0 0.0 0.004024252830391158 0.0011296148295834828 29 0.0 0.0 0.0 0.008048505660782315 0.0011296148295834828 30 0.0 0.0 0.0 0.01426138722349147 0.0011296148295834828 31 0.0 0.0 0.0 0.029934792983962292 0.0011296148295834828 32 0.0 0.0 0.0 0.05069146547755879 0.0011296148295834828 33 0.0 0.0 0.0 0.07102453241006149 0.0011296148295834828 34 0.0 0.0 0.0 0.09185180583050695 0.0011296148295834828 35 0.0 0.0 0.0 0.11571491910545802 0.0011296148295834828 36 0.0 0.0 0.0 0.15214499735952533 0.0012002157564324505 37 0.0 0.0 0.0 0.2081315323507567 0.0012002157564324505 38 0.0 0.0 0.0 0.2737903943202966 0.0012002157564324505 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGCT 65 1.8143863E-5 23.691109 3 GTATCAA 2225 0.0 23.432524 1 TGTAGGA 570 0.0 22.769976 2 GTAGGAC 515 0.0 21.785309 3 TAGGACG 435 0.0 21.746027 4 TCGATCG 65 4.933246E-4 20.307383 41 ATACCGT 340 0.0 20.05781 6 AGGACGT 500 0.0 19.799 5 CTGTAGG 695 0.0 19.624907 1 ATCGTTT 345 0.0 19.130144 29 GGTATCA 1130 0.0 18.884 1 ACCGTAC 70 8.1270264E-4 18.85619 8 CAACGTA 60 0.0074133673 18.333054 20 ACGATTA 60 0.007414877 18.332405 40 GGTATAT 120 3.164605E-7 18.332405 1 CGTCGTA 370 0.0 17.837566 10 ACCGTCG 360 0.0 17.721327 8 GTCCTAC 435 0.0 17.700254 1 TACCGTC 375 0.0 17.59911 7 CCTTATA 125 4.8583024E-7 17.59849 2 >>END_MODULE