Basic Statistics
Measure | Value |
---|---|
Filename | SRR4063990_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1206467 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 40 | 7.0356095E-4 | 27.49767 | 5 |
TAACGGC | 45 | 0.0013975523 | 24.446424 | 36 |
TAGCGAG | 45 | 0.0013989029 | 24.442371 | 5 |
ACGTACT | 55 | 0.004485807 | 19.998304 | 19 |
GTATCAA | 2120 | 0.0 | 19.92449 | 1 |
CGAACGT | 160 | 5.2750693E-11 | 19.24837 | 4 |
GTATAAA | 125 | 4.8525544E-7 | 17.599966 | 1 |
TATAATA | 175 | 1.9099389E-10 | 17.599236 | 2 |
GTATAGA | 115 | 4.272948E-6 | 17.21736 | 1 |
AACCGTG | 130 | 7.3200863E-7 | 16.922344 | 7 |
CTACACC | 210 | 9.094947E-12 | 16.760485 | 4 |
GATTAAT | 335 | 0.0 | 16.41788 | 38 |
GATATAT | 215 | 1.2732926E-11 | 16.372063 | 1 |
TAGTACT | 125 | 9.447751E-6 | 15.838657 | 4 |
TAGCACT | 210 | 1.5097612E-10 | 15.712954 | 4 |
CGCGCAA | 170 | 4.4896296E-8 | 15.529384 | 21 |
GTACATG | 4165 | 0.0 | 15.476562 | 1 |
AACGCAG | 2760 | 0.0 | 15.462457 | 6 |
ATAATAC | 185 | 7.574272E-9 | 15.45815 | 3 |
TACATGG | 4220 | 0.0 | 15.430611 | 2 |