##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063989_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2045186 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.272061807581316 32.0 32.0 32.0 32.0 32.0 2 30.90103345123622 32.0 32.0 32.0 32.0 32.0 3 30.916870641594457 32.0 32.0 32.0 32.0 32.0 4 30.943184629662046 32.0 32.0 32.0 32.0 32.0 5 30.868504869483754 32.0 32.0 32.0 32.0 32.0 6 34.52053358472041 36.0 36.0 36.0 32.0 36.0 7 34.4573535121011 36.0 36.0 36.0 32.0 36.0 8 34.42328815080878 36.0 36.0 36.0 32.0 36.0 9 34.543453749438925 36.0 36.0 36.0 32.0 36.0 10 34.2633379066745 36.0 36.0 36.0 32.0 36.0 11 34.5195361204311 36.0 36.0 36.0 32.0 36.0 12 34.33998325824644 36.0 36.0 36.0 32.0 36.0 13 34.42647759176916 36.0 36.0 36.0 32.0 36.0 14 34.327350177441076 36.0 36.0 36.0 32.0 36.0 15 34.27156894287366 36.0 36.0 36.0 32.0 36.0 16 34.26238835978732 36.0 36.0 36.0 32.0 36.0 17 34.183638065193094 36.0 36.0 36.0 32.0 36.0 18 34.189482032441056 36.0 36.0 36.0 32.0 36.0 19 34.19521843001077 36.0 36.0 36.0 32.0 36.0 20 34.179563130199405 36.0 36.0 36.0 32.0 36.0 21 34.157327010844 36.0 36.0 36.0 32.0 36.0 22 34.13678951449893 36.0 36.0 36.0 32.0 36.0 23 34.07975900480445 36.0 36.0 36.0 32.0 36.0 24 34.0567537622495 36.0 36.0 36.0 32.0 36.0 25 33.66890786461476 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 22.0 5 14.0 6 88.0 7 37.0 8 97.0 9 147.0 10 189.0 11 54.0 12 124.0 13 114.0 14 217.0 15 365.0 16 679.0 17 826.0 18 1076.0 19 1466.0 20 2087.0 21 3129.0 22 4763.0 23 7029.0 24 10617.0 25 15200.0 26 21877.0 27 28586.0 28 39101.0 29 52735.0 30 69565.0 31 94657.0 32 134516.0 33 191108.0 34 418837.0 35 945857.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.72114916631978 17.050982479190402 11.116828713407413 26.111039641082407 2 16.7647474454582 19.533143642580768 37.562680830069 26.13942808189203 3 18.773460958666664 23.65123782915019 28.59414430118431 28.981156910998834 4 12.44181247775183 15.262098114919867 35.96076889676458 36.335320510563726 5 14.536192927233705 36.57097142834789 33.69815828760797 15.194677356810443 6 34.38417974662127 35.5603120508694 16.78513078487552 13.270377417633819 7 30.508942090622053 30.335274601019606 20.708931135534 18.44685217282434 8 28.222562437024934 33.10419377243869 19.26616319223658 19.407080598299796 9 27.628935980361558 13.832959747651104 18.391862843993163 40.14624142799417 10 15.979048554671218 26.322136789101965 31.61102641729502 26.087788238931804 11 37.547222980529604 20.638974259622923 22.69628664214643 19.117516117701047 12 25.03034688656356 23.32984484802583 28.969937867777112 22.669870397633503 13 29.695609798103945 19.287668605515933 25.228786823131543 25.787934773248576 14 23.544084670437126 19.88381349683406 24.9566123213668 31.615489511362014 15 25.079418353822525 27.84013879192122 21.92925075944642 25.151192094809833 16 25.810133934054125 25.45353751185923 24.093695612073198 24.64263294201345 17 23.905034312627027 26.0125233994209 25.272450967632714 24.80999132031936 18 24.861125791260026 24.589640903983998 26.55203427716904 23.997199027586934 19 25.864548484345818 24.61158746725816 25.106831490297456 24.417032558098565 20 26.009601033505746 24.1768410544499 24.85752594774728 24.956031964297072 21 26.944435881288232 23.94341662103728 24.184212573747125 24.927934923927367 22 26.22067199166947 24.427679640550075 24.661192904367706 24.690455463412746 23 24.354268281642337 24.274061064167242 25.4794204135443 25.89225024064612 24 25.13995294449251 24.727385365815465 25.327274577890176 24.80538711180185 25 24.896294596259704 24.48866641970826 25.265166288317904 25.349872695714133 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 168.0 1 168.0 2 395.0 3 622.0 4 622.0 5 622.0 6 1765.5 7 2909.0 8 2909.0 9 2909.0 10 3115.5 11 3322.0 12 3322.0 13 3322.0 14 3939.5 15 4557.0 16 4557.0 17 4557.0 18 8019.0 19 11481.0 20 11481.0 21 11481.0 22 19426.5 23 27372.0 24 27372.0 25 27372.0 26 42605.0 27 57838.0 28 57838.0 29 57838.0 30 73820.5 31 89803.0 32 89803.0 33 89803.0 34 110135.5 35 130468.0 36 130468.0 37 130468.0 38 148809.5 39 167151.0 40 167151.0 41 167151.0 42 191629.0 43 216107.0 44 216107.0 45 216107.0 46 240551.0 47 264995.0 48 264995.0 49 264995.0 50 271097.0 51 277199.0 52 277199.0 53 277199.0 54 256169.0 55 235139.0 56 235139.0 57 235139.0 58 215917.5 59 196696.0 60 196696.0 61 196696.0 62 173756.0 63 150816.0 64 150816.0 65 150816.0 66 124954.5 67 99093.0 68 99093.0 69 99093.0 70 74808.5 71 50524.0 72 50524.0 73 50524.0 74 39154.5 75 27785.0 76 27785.0 77 27785.0 78 22625.0 79 17465.0 80 17465.0 81 17465.0 82 12124.5 83 6784.0 84 6784.0 85 6784.0 86 5214.5 87 3645.0 88 3645.0 89 3645.0 90 2584.0 91 1523.0 92 1523.0 93 1523.0 94 1042.0 95 561.0 96 561.0 97 561.0 98 862.0 99 1163.0 100 1163.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03994746688076292 2 0.005036216754857505 3 0.001613545173886385 4 0.003618252814169469 5 0.009143422652022849 6 0.012859466082791492 7 0.023176376134004438 8 0.035497993825500465 9 0.05045995816517422 10 0.05975006674209583 11 0.056718557627521406 12 0.06449291164715582 13 0.06659540990403806 14 0.06860011754432115 15 0.06175477438237891 16 0.06938244247711456 17 0.06512855065505045 18 0.07872144636233576 19 0.07564104193946175 20 0.08097063054411677 21 0.07564104193946175 22 0.07916150413703203 23 0.08453998804998665 24 0.08028609622792254 25 0.08101952585241635 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2045186.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.809832951023054 #Duplication Level Percentage of deduplicated Percentage of total 1 76.57122944958518 37.3742891828871 2 13.585450261786027 13.262071156844165 3 4.279149808257863 6.265937619404058 4 1.7636088919619184 3.443258216304004 5 0.9584457157831403 2.33907876399994 6 0.5846953181272403 1.712332848302153 7 0.39351405259561384 1.3445148619750407 8 0.27894329177376925 1.0892140379428927 9 0.20649389778455413 0.9071039390642743 >10 1.176586546016148 10.462600036325362 >50 0.09683347533062091 3.3147103767863033 >100 0.0853290202106399 9.037429990461836 >500 0.013079771440526513 4.396366604387982 >1k 0.006640499346728844 5.051092365314911 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4238 0.20721831657365147 No Hit TATCAACGCAGAGTACTTTTTTTTT 3128 0.15294452436110945 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2547 0.12453635023904916 No Hit GAATAGGACCGCGGTTCTATTTTGT 2340 0.11441502142103457 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2317 0.11329042933014405 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2268 0.11089455922346426 No Hit GTATCTGATCGTCTTCGAACCTCCG 2215 0.10830310788358613 No Hit CTATTGGAGCTGGAATTACCGCGGC 2203 0.1077163641839911 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2173 0.10624950493500346 No Hit GTCCTATTCCATTATTCCTAGCTGC 2053 0.10038206793905298 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 9.779061659917485E-5 0.0 0.0 0.0 4.889530829958742E-5 7 9.779061659917485E-5 0.0 0.0 0.0 4.889530829958742E-5 8 9.779061659917485E-5 0.0 0.0 0.0 4.889530829958742E-5 9 9.779061659917485E-5 0.0 0.0 0.0 4.889530829958742E-5 10 9.779061659917485E-5 0.0 0.0 0.0 4.889530829958742E-5 11 9.779061659917485E-5 0.0 0.0 0.0 4.889530829958742E-5 12 9.779061659917485E-5 0.0 0.0 0.0 1.955812331983497E-4 13 9.779061659917485E-5 0.0 0.0 4.889530829958742E-5 2.4447654149793713E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAA 75 1.4763642E-5 12.668966 19 CGTTATT 165 0.0 12.66091 2 CGTCTTA 160 0.0 12.471319 15 CCGAGTA 55 0.003066529 12.092217 14 AAGACGG 475 0.0 11.999244 5 CGCATCG 330 0.0 11.80344 13 GTCCTAC 820 0.0 11.69905 1 CCGATAA 195 0.0 11.692429 9 GTCCTAA 490 0.0 11.630496 1 CCGTCGT 450 0.0 11.61123 9 ACCGTCG 455 0.0 11.483354 8 CGTCGTA 465 0.0 11.440977 10 CGAACGA 200 0.0 11.402349 16 CGCAAGA 470 0.0 11.314006 2 CTAGGAC 210 0.0 11.306321 3 TACCGTC 475 0.0 11.1998415 7 CAAGACG 510 0.0 11.175493 4 TAATATA 375 0.0 11.14569 4 GTTATTC 205 0.0 11.118801 3 ACGAACA 60 0.0058773495 11.083177 11 >>END_MODULE