##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063989_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2045186 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.309884284363378 32.0 32.0 32.0 32.0 32.0 2 31.409801846873584 32.0 32.0 32.0 32.0 32.0 3 31.482906200218466 32.0 32.0 32.0 32.0 32.0 4 31.565648796735356 32.0 32.0 32.0 32.0 32.0 5 31.51422706785593 32.0 32.0 32.0 32.0 32.0 6 35.10798675523889 36.0 36.0 36.0 36.0 36.0 7 35.125718638793735 36.0 36.0 36.0 36.0 36.0 8 35.0702972736954 36.0 36.0 36.0 36.0 36.0 9 35.18214773619612 36.0 36.0 36.0 36.0 36.0 10 35.03025250515112 36.0 36.0 36.0 36.0 36.0 11 35.17442227748479 36.0 36.0 36.0 36.0 36.0 12 35.07763010308109 36.0 36.0 36.0 36.0 36.0 13 35.1210124653699 36.0 36.0 36.0 36.0 36.0 14 35.06562483803429 36.0 36.0 36.0 36.0 36.0 15 35.03734281380764 36.0 36.0 36.0 36.0 36.0 16 35.05114253666903 36.0 36.0 36.0 36.0 36.0 17 35.009583969379804 36.0 36.0 36.0 36.0 36.0 18 35.01130117260728 36.0 36.0 36.0 36.0 36.0 19 35.00558482211398 36.0 36.0 36.0 36.0 36.0 20 35.00054420478138 36.0 36.0 36.0 36.0 36.0 21 34.993154167884974 36.0 36.0 36.0 36.0 36.0 22 34.97696688711931 36.0 36.0 36.0 36.0 36.0 23 34.92112697818194 36.0 36.0 36.0 32.0 36.0 24 34.891999554074786 36.0 36.0 36.0 32.0 36.0 25 34.86097645886487 36.0 36.0 36.0 32.0 36.0 26 34.80645476743925 36.0 36.0 36.0 32.0 36.0 27 34.78998829446319 36.0 36.0 36.0 32.0 36.0 28 34.76708133147792 36.0 36.0 36.0 32.0 36.0 29 34.7338755497055 36.0 36.0 36.0 32.0 36.0 30 34.72408719793701 36.0 36.0 36.0 32.0 36.0 31 34.71394288832409 36.0 36.0 36.0 32.0 36.0 32 34.67155750137152 36.0 36.0 36.0 32.0 36.0 33 34.65289171742815 36.0 36.0 36.0 32.0 36.0 34 34.646334367632086 36.0 36.0 36.0 32.0 36.0 35 34.60254079580048 36.0 36.0 36.0 32.0 36.0 36 34.57687026999011 36.0 36.0 36.0 32.0 36.0 37 34.55919119336823 36.0 36.0 36.0 32.0 36.0 38 34.517591065066945 36.0 36.0 36.0 32.0 36.0 39 34.50029141603746 36.0 36.0 36.0 32.0 36.0 40 34.48593379770838 36.0 36.0 36.0 32.0 36.0 41 34.47475681918417 36.0 36.0 36.0 32.0 36.0 42 34.401625084466644 36.0 36.0 36.0 32.0 36.0 43 34.397086132997195 36.0 36.0 36.0 32.0 36.0 44 34.316708602542754 36.0 36.0 36.0 32.0 36.0 45 34.29513648147406 36.0 36.0 36.0 32.0 36.0 46 34.26219131169488 36.0 36.0 36.0 32.0 36.0 47 34.24706652597857 36.0 36.0 36.0 32.0 36.0 48 34.19890073567881 36.0 36.0 36.0 32.0 36.0 49 34.177227401321936 36.0 36.0 36.0 32.0 36.0 50 33.587689334857565 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 11.0 20 21.0 21 78.0 22 244.0 23 704.0 24 1755.0 25 4183.0 26 8051.0 27 14619.0 28 23853.0 29 36213.0 30 51658.0 31 72763.0 32 105292.0 33 170084.0 34 355245.0 35 1200409.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.77908938430017 17.928547327859796 11.621572721627 26.670790566213036 2 15.928833578299786 20.246061711987906 37.20742155450528 26.61768315520703 3 18.0505784084636 24.13664120681739 28.975626118177317 28.837154266541692 4 12.08457323685963 15.832887571106003 36.13245934599591 35.95007984603845 5 14.195774858619217 36.92358543428324 33.48570741243095 15.394932294666596 6 34.43253622299075 35.8624844084552 16.542708486641022 13.162270881913027 7 30.367683298911004 30.487965874953062 20.71657122293153 18.427779603204407 8 28.14394387600932 33.25056987481823 19.175908694857092 19.42957755431535 9 27.574827666800637 13.660358132298308 18.31836633309961 40.44644786780144 10 15.83526063847993 26.52366306957368 31.617078286890575 26.023998005055816 11 37.653005643496485 20.630250744920023 22.66801161361363 19.048731997969867 12 24.990697663047598 23.352508452780555 28.913179003366444 22.743614880805403 13 29.74755680815266 19.26883447023797 25.289743214877173 25.693865506732195 14 23.502967953920926 19.771707135802227 24.974329887833836 31.750995022443014 15 25.071451168963126 27.841580595207184 21.923443464705688 25.163524771123996 16 25.748190002879955 25.496132593443377 24.029505630097074 24.72617177357959 17 23.968186756607956 26.07850826281815 25.20054410699076 24.752760873583135 18 24.901658878424705 24.582762274365493 26.517411451429385 23.998167395780413 19 25.85932323970692 24.575918559934674 25.09826739390324 24.466490806455162 20 26.023713350971576 24.146174145318476 24.87990037048138 24.95021213322857 21 26.99187262185444 23.92510998999602 24.213445623038687 24.86957176511085 22 26.171020476417254 24.342821323481235 24.747333000192647 24.73882519990886 23 24.34253470991338 24.10460769668951 25.56238738683676 25.99047020656035 24 25.24666520958292 24.677326847843787 25.222657554514733 24.853350388058562 25 24.98566116338939 24.367660972693866 25.3681279322493 25.27854993166744 26 24.69992425676029 25.277264754651068 25.664733722660433 24.35807726592821 27 25.27001652763244 24.77824611502841 24.82998053846831 25.12175681887084 28 24.43939062029362 24.731406251833654 25.49185955084749 25.337343577025234 29 24.641281095287574 24.649984719760408 25.344318806918892 25.36441537803313 30 24.353665256961854 24.910163712545394 25.84082315416929 24.895347876323463 31 25.47032386369471 24.514835256453825 24.56456565121145 25.450275228640013 32 24.90412500837363 24.802761317111884 24.46282866797939 25.830285006535096 33 24.356296889952038 24.53506731518214 25.479430888067515 25.629204906798314 34 25.3194322269723 24.607148847031922 25.49027853228648 24.583140393709296 35 25.755589511643546 24.388875985575453 25.463724711203472 24.391809791577533 36 24.500822244161775 25.08702878661407 25.145512522414283 25.266636446809876 37 25.689050446017962 24.76083041537883 24.63814674805156 24.911972390551647 38 24.725443722747915 24.81331542321935 25.228811159950453 25.23242969408228 39 25.617485579941597 24.349459284483448 24.650818456892388 25.382236678682567 40 25.83970294279869 24.58418250593606 25.223800172898713 24.35231437836654 41 24.752874170216593 24.9907095552713 25.723138879435453 24.53327739507665 42 26.006385870893922 25.321493883059347 24.904456418631487 23.767663827415237 43 24.954196356929565 24.38020226458492 25.312215331641845 25.353386046843667 44 24.58515409819393 25.10359840344775 24.834572602494575 25.476674895863738 45 24.727148086919488 25.2679867609186 24.84552530685908 25.15933984530283 46 24.66653041027517 24.71747986958503 25.032613521458423 25.58337619868138 47 25.144257827035343 24.531727431553016 25.43504718298117 24.888967558430473 48 25.610361339389314 25.227111480333143 24.341451274019736 24.821075906257807 49 24.97701909273334 25.30652618649935 24.595682718748897 25.12077200201841 50 24.742562929061783 25.801746562616128 24.520526511373195 24.935163996948894 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 43.0 2 39.0 3 114.0 4 189.0 5 245.0 6 301.0 7 283.0 8 265.0 9 362.0 10 459.0 11 723.5 12 988.0 13 1799.5 14 2611.0 15 3412.5 16 4214.0 17 4572.0 18 4930.0 19 5004.0 20 5078.0 21 5694.5 22 6311.0 23 7111.5 24 7912.0 25 9370.0 26 10828.0 27 14060.5 28 17293.0 29 21038.0 30 24783.0 31 28785.0 32 32787.0 33 39098.0 34 45409.0 35 53666.0 36 61923.0 37 71122.0 38 80321.0 39 85334.0 40 90347.0 41 97491.5 42 104636.0 43 106944.0 44 109252.0 45 120258.5 46 131265.0 47 139859.5 48 148454.0 49 153870.5 50 159287.0 51 153174.5 52 147062.0 53 146097.5 54 145133.0 55 145976.0 56 146819.0 57 142872.5 58 138926.0 59 126869.5 60 114813.0 61 100546.0 62 86279.0 63 75367.0 64 64455.0 65 55288.5 66 46122.0 67 39853.5 68 33585.0 69 30876.0 70 28167.0 71 21556.0 72 14945.0 73 12879.0 74 10813.0 75 8536.5 76 6260.0 77 5442.0 78 4624.0 79 3829.0 80 3034.0 81 2448.5 82 1863.0 83 1541.0 84 1219.0 85 884.5 86 550.0 87 392.5 88 235.0 89 181.0 90 127.0 91 100.0 92 73.0 93 68.5 94 64.0 95 51.0 96 38.0 97 32.5 98 27.0 99 25.5 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009583480426719134 2 3.9116246639669933E-4 3 2.4447654149793713E-4 4 0.0 5 0.0 6 3.4226715809711195E-4 7 9.779061659917483E-5 8 0.0 9 9.779061659917485E-4 10 7.823249327933987E-4 11 0.0 12 4.8895308299587416E-5 13 6.356390078946365E-4 14 2.9337184979752457E-4 15 0.0040583105888657555 16 8.312202410929862E-4 17 0.0 18 4.400577746962868E-4 19 4.8895308299587416E-5 20 4.400577746962868E-4 21 0.0 22 1.9558123319834967E-4 23 0.001026801474291336 24 2.4447654149793713E-4 25 0.002004707640283084 26 0.005818541687650903 27 0.006160808845748014 28 0.0044005777469628676 29 0.0029826138062748328 30 0.0037649387390682318 31 0.0077743540196344 32 0.0036671481224690564 33 0.005134007371456679 34 0.003569357505869882 35 0.0029826138062748328 36 0.008458888335828625 37 0.00435168243866328 38 0.0077743540196344 39 0.005769646379351316 40 0.0028359278813760705 41 0.003618252814169469 42 0.0022491841817810217 43 0.002102498256882259 44 0.0014179639406880352 45 0.0014179639406880352 46 0.0010756967825909234 47 0.003080404422874007 48 0.0022002888734814338 49 4.889530829958743E-4 50 0.001271278015789273 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2045186.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.57496183627202 #Duplication Level Percentage of deduplicated Percentage of total 1 77.63367397134047 40.81587446252809 2 13.177943761146228 13.856597806456033 3 4.0587359792025905 6.4016366763024095 4 1.7414070253645422 3.6621763159982703 5 0.8790489305952429 2.310798198913031 6 0.5149826168124108 1.6245114855153595 7 0.36704374668422685 1.3508117681915863 8 0.25742299670716173 1.0827203382126243 9 0.1878396097511121 0.8888094282604453 >10 1.0152052407183227 9.657363314697509 >50 0.08022767792254484 2.9497858707862923 >100 0.07155893552387228 8.046884401205041 >500 0.010127213138292079 3.640543760083296 >1k 0.004782295093082369 3.711486172850034 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2405 0.11759321646050776 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2397 0.11720205399411104 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2352 0.11500176512062961 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2241 0.1095743858993754 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2190 0.10708072517609646 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2178 0.10649398147650141 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2074 0.10140886941334432 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.889530829958742E-5 2 0.0 0.0 0.0 0.0 4.889530829958742E-5 3 0.0 0.0 0.0 0.0 4.889530829958742E-5 4 0.0 0.0 0.0 4.889530829958742E-5 4.889530829958742E-5 5 0.0 0.0 0.0 4.889530829958742E-5 4.889530829958742E-5 6 0.0 0.0 0.0 4.889530829958742E-5 9.779061659917485E-5 7 0.0 0.0 0.0 4.889530829958742E-5 9.779061659917485E-5 8 0.0 0.0 0.0 4.889530829958742E-5 9.779061659917485E-5 9 0.0 0.0 0.0 4.889530829958742E-5 9.779061659917485E-5 10 0.0 0.0 0.0 4.889530829958742E-5 9.779061659917485E-5 11 0.0 0.0 0.0 4.889530829958742E-5 9.779061659917485E-5 12 0.0 0.0 0.0 4.889530829958742E-5 1.955812331983497E-4 13 0.0 0.0 0.0 9.779061659917485E-5 2.4447654149793713E-4 14 0.0 0.0 0.0 9.779061659917485E-5 2.933718497975245E-4 15 0.0 0.0 0.0 1.4668592489876226E-4 3.911624663966994E-4 16 9.779061659917485E-5 0.0 0.0 1.955812331983497E-4 3.911624663966994E-4 17 9.779061659917485E-5 0.0 0.0 2.4447654149793713E-4 4.889530829958743E-4 18 9.779061659917485E-5 0.0 0.0 2.4447654149793713E-4 4.889530829958743E-4 19 9.779061659917485E-5 0.0 0.0 2.4447654149793713E-4 4.889530829958743E-4 20 9.779061659917485E-5 0.0 0.0 2.4447654149793713E-4 5.86743699595049E-4 21 9.779061659917485E-5 0.0 0.0 3.4226715809711195E-4 6.845343161942239E-4 22 9.779061659917485E-5 0.0 0.0 6.356390078946365E-4 7.334296244938113E-4 23 9.779061659917485E-5 0.0 0.0 0.0010756967825909232 7.334296244938113E-4 24 9.779061659917485E-5 0.0 0.0 0.00151575455728721 7.334296244938113E-4 25 9.779061659917485E-5 0.0 0.0 0.0022491841817810212 7.334296244938113E-4 26 9.779061659917485E-5 0.0 0.0 0.0025914513398781333 7.334296244938113E-4 27 9.779061659917485E-5 0.0 0.0 0.0029826138062748328 7.823249327933988E-4 28 9.779061659917485E-5 0.0 0.0 0.005720751071051728 8.312202410929862E-4 29 9.779061659917485E-5 0.0 0.0 0.010365805359512533 8.312202410929862E-4 30 9.779061659917485E-5 0.0 0.0 0.019362542086636618 8.312202410929862E-4 31 9.779061659917485E-5 0.0 0.0 0.04366351031153157 8.312202410929862E-4 32 9.779061659917485E-5 0.0 0.0 0.06830674569452362 9.29010857692161E-4 33 9.779061659917485E-5 0.0 0.0 0.09153201713682765 9.29010857692161E-4 34 9.779061659917485E-5 0.0 0.0 0.11832664608500156 9.29010857692161E-4 35 9.779061659917485E-5 0.0 0.0 0.15010859647973337 9.29010857692161E-4 36 9.779061659917485E-5 0.0 0.0 0.19269641000867402 9.29010857692161E-4 37 9.779061659917485E-5 0.0 0.0 0.2554290905570447 9.29010857692161E-4 38 9.779061659917485E-5 0.0 0.0 0.3436851220378 9.779061659917485E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3420 0.0 20.649685 1 TAGGACG 950 0.0 19.219227 4 TTAGGAC 765 0.0 18.40348 3 TGTAGGA 1125 0.0 18.184938 2 GTCCTAC 920 0.0 18.174408 1 GTCCTAA 715 0.0 18.15434 1 TGGCGAG 1200 0.0 17.415012 18 ACCGTCG 585 0.0 17.297503 8 CGTCGTA 610 0.0 16.950039 10 GTAGGAC 1085 0.0 16.827894 3 AGGACGT 1090 0.0 16.548887 5 TACCGTC 595 0.0 16.267363 7 TATGGCG 1275 0.0 16.218067 16 TTTAGGA 965 0.0 16.184992 2 CGGTCCA 820 0.0 16.096817 10 ATACCGT 615 0.0 16.096031 6 CTGTAGG 1235 0.0 16.032824 1 CTTTAGG 920 0.0 16.022175 1 CGCAATA 745 0.0 15.948302 36 TCCTACA 1145 0.0 15.946083 2 >>END_MODULE