##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063987_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2102747 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.330872901019475 32.0 32.0 32.0 32.0 32.0 2 31.398648054188165 32.0 32.0 32.0 32.0 32.0 3 31.474797015523027 32.0 32.0 32.0 32.0 32.0 4 31.55547148563284 32.0 32.0 32.0 32.0 32.0 5 31.504075858864617 32.0 32.0 32.0 32.0 32.0 6 35.08926846643938 36.0 36.0 36.0 36.0 36.0 7 35.10458604863067 36.0 36.0 36.0 36.0 36.0 8 35.0496688379534 36.0 36.0 36.0 36.0 36.0 9 35.16152918063847 36.0 36.0 36.0 36.0 36.0 10 35.012564041227975 36.0 36.0 36.0 36.0 36.0 11 35.158560207195634 36.0 36.0 36.0 36.0 36.0 12 35.06250775770932 36.0 36.0 36.0 36.0 36.0 13 35.10748986920443 36.0 36.0 36.0 36.0 36.0 14 35.05066990940898 36.0 36.0 36.0 36.0 36.0 15 35.017396291612826 36.0 36.0 36.0 36.0 36.0 16 35.02986902371041 36.0 36.0 36.0 36.0 36.0 17 34.99164473900093 36.0 36.0 36.0 36.0 36.0 18 34.99245796094347 36.0 36.0 36.0 36.0 36.0 19 34.986971328457486 36.0 36.0 36.0 36.0 36.0 20 34.984581597310566 36.0 36.0 36.0 36.0 36.0 21 34.97975220033604 36.0 36.0 36.0 36.0 36.0 22 34.966691665711565 36.0 36.0 36.0 36.0 36.0 23 34.910872777371694 36.0 36.0 36.0 32.0 36.0 24 34.87862686286082 36.0 36.0 36.0 32.0 36.0 25 34.859616967709385 36.0 36.0 36.0 32.0 36.0 26 34.79392718191965 36.0 36.0 36.0 32.0 36.0 27 34.794354717899964 36.0 36.0 36.0 32.0 36.0 28 34.77099432314016 36.0 36.0 36.0 32.0 36.0 29 34.73750717513805 36.0 36.0 36.0 32.0 36.0 30 34.72032108475247 36.0 36.0 36.0 32.0 36.0 31 34.72274695909684 36.0 36.0 36.0 32.0 36.0 32 34.679680437066374 36.0 36.0 36.0 32.0 36.0 33 34.66107049492878 36.0 36.0 36.0 32.0 36.0 34 34.64636306697857 36.0 36.0 36.0 32.0 36.0 35 34.60530296797475 36.0 36.0 36.0 32.0 36.0 36 34.58543942756784 36.0 36.0 36.0 32.0 36.0 37 34.58117928595309 36.0 36.0 36.0 32.0 36.0 38 34.543812926614564 36.0 36.0 36.0 32.0 36.0 39 34.54598104289294 36.0 36.0 36.0 32.0 36.0 40 34.5178597330064 36.0 36.0 36.0 32.0 36.0 41 34.50576317550328 36.0 36.0 36.0 32.0 36.0 42 34.43883833861135 36.0 36.0 36.0 32.0 36.0 43 34.42523755829874 36.0 36.0 36.0 32.0 36.0 44 34.36451651102106 36.0 36.0 36.0 32.0 36.0 45 34.34150756129958 36.0 36.0 36.0 32.0 36.0 46 34.32764712064742 36.0 36.0 36.0 32.0 36.0 47 34.299255687916805 36.0 36.0 36.0 32.0 36.0 48 34.248805015534444 36.0 36.0 36.0 32.0 36.0 49 34.22676146963948 36.0 36.0 36.0 32.0 36.0 50 33.63082767446583 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 2.0 18 3.0 19 13.0 20 22.0 21 73.0 22 233.0 23 604.0 24 1759.0 25 3871.0 26 8018.0 27 14733.0 28 23957.0 29 36866.0 30 53017.0 31 75667.0 32 108776.0 33 176018.0 34 364575.0 35 1234539.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.69014462314655 17.802801146027143 11.878759688152773 26.62829454267353 2 16.29910673734901 20.152220363801344 36.299667909647454 27.24900498920219 3 17.940882037527135 23.794754000128403 28.8613217484764 29.403042213868062 4 12.419753779223083 15.780310232281867 35.383286719705225 36.416649268789826 5 14.603754041736833 36.51913425628476 33.081963736008184 15.79514796597023 6 34.92260815763805 35.22440471746164 16.352893675445525 13.500093449454784 7 30.79444688041256 30.29923728305749 20.354098878323867 18.55221695820608 8 28.71011110704236 32.47085835813819 18.89047992934956 19.92855060546989 9 27.640514094805553 13.830006301347062 18.10888252148997 40.42059708235742 10 15.991281797399282 26.46444355353786 31.243047718510297 26.301226930552563 11 37.72132358291321 20.79051830771843 22.068513235306007 19.419644874062357 12 24.83257606957759 23.443059694323516 28.27379055768029 23.4505736784186 13 29.667613687703724 19.109787543265103 25.07911129034866 26.143487478682516 14 23.939743554380797 19.093842052249773 24.8357623792888 32.13065201408064 15 25.469622561287064 26.803703524035903 21.877291755245533 25.8493821594315 16 26.195206997372942 25.52845536188159 23.09490700669415 25.18143063405132 17 24.543573023085052 25.676900586185873 24.627891338278612 25.15163505245046 18 25.360434480725146 24.66852773048499 25.579624680179197 24.39141310861067 19 25.88966998391627 24.584804821885285 25.060468549220875 24.46505664497757 20 26.18438661285736 23.97778320985916 24.512658282027115 25.325171895256364 21 27.169174418035073 23.87262946992672 24.180560000798952 24.77763611123925 22 26.255742507395112 23.834140217050134 24.655354442299096 25.254762833255658 23 24.964213053366066 23.685061553548213 25.14345690966281 26.20726848342291 24 25.218287446997522 24.474112725730144 24.806775185805893 25.500824641466437 25 25.28060204184027 24.026411618144387 25.005338346544058 25.687647993471284 26 25.222769263548784 24.804577518377037 25.137827780906143 24.834825437168035 27 25.75736029551997 24.36674801043851 24.441988225049094 25.433903468992426 28 25.06243291226291 24.213649682282938 25.355966284562818 25.36795112089133 29 25.055381756027312 24.437788382243976 25.11896733594017 25.38786252578854 30 25.001605112008285 24.588603847417815 25.265889776601703 25.1439012639722 31 25.55947983856009 24.350059783751185 24.410556944855315 25.679903432833406 32 25.337476006673427 24.39372264190067 24.325713807410395 25.94308754401551 33 24.937970866163077 24.011184029988954 24.95276178862678 26.098083315221192 34 25.692488927168277 24.11882231582812 25.007312135195793 25.181376621807804 35 26.132116345021135 23.99997717195746 24.95927810120147 24.908628381819938 36 25.02005883290172 24.65398215988566 24.68503946370267 25.64091954350995 37 25.93504135949637 24.36369914123104 24.61718745912917 25.08407204014342 38 25.170135970851092 24.187249682890045 25.07477707182071 25.567837274438155 39 25.692784822106717 24.20993257514255 24.47350636367571 25.62377623907503 40 25.799759736794798 24.359226782403905 24.93049392826536 24.910519552535938 41 24.995077677576944 24.754002775524025 25.094332623440906 25.156586923458125 42 26.077498675508657 24.695699897369757 24.664501824801896 24.56229960231969 43 25.44617443497888 23.886329492098053 24.914574484629114 25.752921588293958 44 25.123602281244413 24.421080965914495 24.612357755127665 25.842958997713428 45 25.1917639813289 24.679141015306403 24.649274866066015 25.47982013729868 46 25.08397468608472 24.394723588576113 24.866399044664593 25.654902680674574 47 25.32189657648712 24.246656907757384 25.091097420737395 25.340349095018105 48 25.95916010803258 24.77311303234557 24.281078746886738 24.986648112735107 49 25.18005113338051 24.904315139893928 24.359786487699836 25.555847239025724 50 25.156880360029426 24.997705349792675 24.448748928172456 25.396665362005443 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 19.5 2 28.0 3 106.5 4 185.0 5 233.5 6 282.0 7 285.0 8 288.0 9 362.0 10 436.0 11 684.5 12 933.0 13 1806.5 14 2680.0 15 3558.5 16 4437.0 17 4645.5 18 4854.0 19 4929.5 20 5005.0 21 5483.0 22 5961.0 23 6843.0 24 7725.0 25 9139.5 26 10554.0 27 12985.5 28 15417.0 29 18255.5 30 21094.0 31 24253.0 32 27412.0 33 31802.0 34 36192.0 35 42565.5 36 48939.0 37 59458.5 38 69978.0 39 78016.0 40 86054.0 41 95615.5 42 105177.0 43 109514.5 44 113852.0 45 125730.0 46 137608.0 47 146186.0 48 154764.0 49 160950.0 50 167136.0 51 163559.5 52 159983.0 53 158062.5 54 156142.0 55 156837.5 56 157533.0 57 153478.0 58 149423.0 59 136501.0 60 123579.0 61 109103.5 62 94628.0 63 82340.5 64 70053.0 65 59509.5 66 48966.0 67 42989.5 68 37013.0 69 33121.0 70 29229.0 71 22927.5 72 16626.0 73 14248.5 74 11871.0 75 9470.0 76 7069.0 77 6169.0 78 5269.0 79 4449.0 80 3629.0 81 2854.5 82 2080.0 83 1711.5 84 1343.0 85 985.5 86 628.0 87 467.0 88 306.0 89 219.0 90 132.0 91 114.0 92 96.0 93 72.0 94 48.0 95 50.0 96 52.0 97 38.0 98 24.0 99 23.5 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00851267413530967 2 2.8534103246848053E-4 3 9.511367748949351E-5 4 0.0 5 0.0 6 2.8534103246848053E-4 7 4.7556838744746755E-5 8 0.0 9 0.0010462504523844284 10 9.511367748949351E-4 11 0.0 12 4.7556838744746755E-5 13 6.182389036817077E-4 14 4.7556838744746755E-5 15 0.004803240713219422 16 7.133525811712012E-4 17 4.7556838744746755E-5 18 3.328978712132273E-4 19 4.7556838744746755E-5 20 6.182389036817077E-4 21 0.0 22 3.328978712132273E-4 23 0.0011889209686186688 24 7.133525811712012E-4 25 0.001712046194810883 26 0.005849491165603851 27 0.007038412134222519 28 0.004280115487027208 29 0.003281421873387526 30 0.004280115487027208 31 0.0080371057478622 32 0.0037569902608349933 33 0.005041024906943156 34 0.0037094334220902467 35 0.003328978712132273 36 0.00865534465154391 37 0.004089888132048221 38 0.0077993215541384674 39 0.005231252261922142 40 0.002520512453471578 41 0.0038521039383244866 42 0.002520512453471578 43 0.0018071598723003765 44 0.0016644893560661365 45 0.0015218188398318962 46 0.0014267051623424024 47 0.002520512453471578 48 0.0022827282597478443 49 5.231252261922142E-4 50 0.0014267051623424024 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2102747.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.36504382141493 #Duplication Level Percentage of deduplicated Percentage of total 1 79.34183649256865 44.72106090775169 2 12.335422744265289 13.905732870723828 3 3.5760886379156664 6.046991783561417 4 1.5193582569099326 3.4255477892462785 5 0.8062364459433865 2.27217763030104 6 0.5145177844658978 1.740049048099059 7 0.34385542264245783 1.3566998175831302 8 0.25126309841124816 1.1329964442123597 9 0.18183902635789212 0.9224428220195412 >10 0.9990994647967112 9.953299660928185 >50 0.06461319592223799 2.522659168673642 >100 0.0555747114520403 6.741151930816472 >500 0.00706166630519525 2.738310312848667 >1k 0.0032330520433423975 2.520879813234719 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2167 0.10305566955986623 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.511367748949351E-5 2 0.0 0.0 0.0 0.0 9.511367748949351E-5 3 0.0 0.0 0.0 0.0 9.511367748949351E-5 4 0.0 0.0 0.0 0.0 9.511367748949351E-5 5 0.0 0.0 0.0 0.0 9.511367748949351E-5 6 0.0 0.0 0.0 0.0 9.511367748949351E-5 7 0.0 0.0 0.0 0.0 9.511367748949351E-5 8 0.0 0.0 0.0 0.0 9.511367748949351E-5 9 0.0 0.0 0.0 0.0 9.511367748949351E-5 10 0.0 0.0 0.0 0.0 9.511367748949351E-5 11 0.0 0.0 0.0 0.0 9.511367748949351E-5 12 0.0 0.0 0.0 0.0 1.9022735497898702E-4 13 0.0 0.0 0.0 4.7556838744746755E-5 1.9022735497898702E-4 14 0.0 0.0 0.0 4.7556838744746755E-5 2.3778419372373378E-4 15 0.0 0.0 0.0 9.511367748949351E-5 2.3778419372373378E-4 16 0.0 0.0 0.0 9.511367748949351E-5 2.8534103246848053E-4 17 0.0 0.0 0.0 1.4267051623424027E-4 2.8534103246848053E-4 18 0.0 0.0 0.0 1.4267051623424027E-4 2.8534103246848053E-4 19 0.0 0.0 0.0 1.9022735497898702E-4 2.8534103246848053E-4 20 0.0 0.0 0.0 1.9022735497898702E-4 3.328978712132273E-4 21 0.0 0.0 0.0 1.9022735497898702E-4 3.8045470995797404E-4 22 0.0 0.0 0.0 2.3778419372373378E-4 3.8045470995797404E-4 23 0.0 0.0 0.0 5.706820649369611E-4 5.231252261922143E-4 24 0.0 0.0 0.0 8.560230974054416E-4 5.231252261922143E-4 25 0.0 0.0 0.0 0.0012840346461081623 5.231252261922143E-4 26 0.0 0.0 0.0 0.0016644893560661363 5.231252261922143E-4 27 0.0 0.0 0.0 0.002235171421003097 5.231252261922143E-4 28 0.0 0.0 0.0 0.003852103938324487 5.231252261922143E-4 29 0.0 0.0 0.0 0.007704207876648974 5.231252261922143E-4 30 0.0 0.0 0.0 0.01726313246434307 5.231252261922143E-4 31 0.0 0.0 0.0 0.04023308557805575 5.231252261922143E-4 32 0.0 0.0 0.0 0.0652004259190478 5.706820649369611E-4 33 0.0 0.0 0.0 0.08912151580765541 6.182389036817078E-4 34 0.0 0.0 0.0 0.11508754976228715 7.609094199159481E-4 35 0.0 0.0 0.0 0.14714085907624647 7.609094199159481E-4 36 0.0 0.0 0.0 0.18813485407421815 7.609094199159481E-4 37 0.0 0.0 0.0 0.2507196538623049 7.609094199159481E-4 38 0.0 0.0 0.0 0.33632196360284905 8.560230974054416E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3435 0.0 22.801025 1 GGTATCA 1680 0.0 18.726555 1 ATACCGT 600 0.0 17.965734 6 ACCGTCG 590 0.0 17.524515 8 CGTCGTA 605 0.0 16.727997 10 GTATTAC 160 2.131128E-8 16.50032 1 TACCGTC 640 0.0 16.499144 7 CGTTTAT 695 0.0 16.462318 31 CGCAATA 700 0.0 16.343952 36 CCGTCGT 635 0.0 16.283781 9 AACGCAG 4695 0.0 16.21215 6 TCGTTTA 720 0.0 15.89071 30 TATACCG 125 9.45148E-6 15.839178 5 ATCGTTT 735 0.0 15.565298 29 CATCGTT 760 0.0 15.342769 28 GACGGTA 675 0.0 15.317723 8 TCAACGC 4985 0.0 15.269017 4 CGCATCG 770 0.0 15.143152 13 AATAACG 785 0.0 15.132613 2 TATCAAC 5150 0.0 15.121186 2 >>END_MODULE