##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063986_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 980123 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.345047509343214 32.0 32.0 32.0 32.0 32.0 2 31.432772213283435 32.0 32.0 32.0 32.0 32.0 3 31.4981252353021 32.0 32.0 32.0 32.0 32.0 4 31.575644077324988 32.0 32.0 32.0 32.0 32.0 5 31.527902110245346 32.0 32.0 32.0 32.0 32.0 6 35.12827369626057 36.0 36.0 36.0 36.0 36.0 7 35.140039566462576 36.0 36.0 36.0 36.0 36.0 8 35.08665545038735 36.0 36.0 36.0 36.0 36.0 9 35.20061461673688 36.0 36.0 36.0 36.0 36.0 10 35.049324421526684 36.0 36.0 36.0 36.0 36.0 11 35.19824450604669 36.0 36.0 36.0 36.0 36.0 12 35.099894605064875 36.0 36.0 36.0 36.0 36.0 13 35.14139755928593 36.0 36.0 36.0 36.0 36.0 14 35.089582634016345 36.0 36.0 36.0 36.0 36.0 15 35.05564199595357 36.0 36.0 36.0 36.0 36.0 16 35.06808431186698 36.0 36.0 36.0 36.0 36.0 17 35.03064003191436 36.0 36.0 36.0 36.0 36.0 18 35.030514537461116 36.0 36.0 36.0 36.0 36.0 19 35.02799444559509 36.0 36.0 36.0 36.0 36.0 20 35.026205894566296 36.0 36.0 36.0 36.0 36.0 21 35.01599799208875 36.0 36.0 36.0 36.0 36.0 22 34.99780639776844 36.0 36.0 36.0 36.0 36.0 23 34.95677175211683 36.0 36.0 36.0 36.0 36.0 24 34.92631435034174 36.0 36.0 36.0 36.0 36.0 25 34.89651809007645 36.0 36.0 36.0 32.0 36.0 26 34.84002824135338 36.0 36.0 36.0 32.0 36.0 27 34.83306584989843 36.0 36.0 36.0 32.0 36.0 28 34.81398865244464 36.0 36.0 36.0 32.0 36.0 29 34.78234262434409 36.0 36.0 36.0 32.0 36.0 30 34.765957946094524 36.0 36.0 36.0 32.0 36.0 31 34.76109223026089 36.0 36.0 36.0 32.0 36.0 32 34.72045141273085 36.0 36.0 36.0 32.0 36.0 33 34.69077860635859 36.0 36.0 36.0 32.0 36.0 34 34.679827939962635 36.0 36.0 36.0 32.0 36.0 35 34.63632829757081 36.0 36.0 36.0 32.0 36.0 36 34.61779694997465 36.0 36.0 36.0 32.0 36.0 37 34.609361274044176 36.0 36.0 36.0 32.0 36.0 38 34.5608459346429 36.0 36.0 36.0 32.0 36.0 39 34.56750530290586 36.0 36.0 36.0 32.0 36.0 40 34.547042565065816 36.0 36.0 36.0 32.0 36.0 41 34.52997429914409 36.0 36.0 36.0 32.0 36.0 42 34.464940624799134 36.0 36.0 36.0 32.0 36.0 43 34.44957010497662 36.0 36.0 36.0 32.0 36.0 44 34.39775619998714 36.0 36.0 36.0 32.0 36.0 45 34.37378675941693 36.0 36.0 36.0 32.0 36.0 46 34.34180812000127 36.0 36.0 36.0 32.0 36.0 47 34.31281584046084 36.0 36.0 36.0 32.0 36.0 48 34.272054629878085 36.0 36.0 36.0 32.0 36.0 49 34.25745748237721 36.0 36.0 36.0 32.0 36.0 50 33.6567298186044 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 10.0 21 29.0 22 94.0 23 285.0 24 751.0 25 1757.0 26 3555.0 27 6549.0 28 11138.0 29 16719.0 30 24014.0 31 33887.0 32 49031.0 33 79103.0 34 166864.0 35 586336.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.847280979406584 17.81817142880466 11.565148537481813 26.76939905430694 2 16.11807569912572 20.544077900903666 36.56124727966151 26.776599120309108 3 17.926460100334552 24.3067947732984 29.014478824553297 28.752266301813755 4 12.224282054395214 15.945855775244535 36.02425409872026 35.80560807163999 5 14.241273799308862 37.029332032816285 33.462024664251324 15.267369503623524 6 34.28467942700893 35.885299759213154 16.601844672080972 13.228176141696935 7 30.233552319453782 30.60830120301227 20.98471314314632 18.173433334387624 8 28.19503266426765 32.826594213175284 19.382873374056114 19.595499748500952 9 27.726462518888244 13.613921745278832 18.204338914016528 40.45527682181639 10 15.520047178233531 26.689473560701675 32.08395358494378 25.706525676121018 11 37.56099999693916 20.765659004022964 22.64593321450471 19.027407784533164 12 24.682870788402656 23.609431896673982 28.82827732494253 22.87941998998083 13 29.554124660627252 19.31830587572708 25.354524000706036 25.77304546293963 14 23.685340891583795 19.296801109250797 25.304834811212086 31.713023187953326 15 25.3236264941611 27.062694821261857 22.123124486641192 25.49055419793585 16 25.99161731876635 25.342510478351542 23.64138530541283 25.024486897469277 17 24.13380769556474 25.657596036415836 25.11950030761445 25.08909596040497 18 25.03287866065243 24.561201241890014 26.069793565883327 24.336126531574227 19 25.562762148755102 24.702154121787004 25.408699538118253 24.32638419133964 20 25.96536550079021 23.945716906381968 24.947429960178386 25.14148763264944 21 26.981715560189894 23.966787841934124 24.378368837380616 24.673127760495365 22 25.909911307050237 24.149111897180255 24.881162874455555 25.059813921313957 23 24.61749425578197 23.806671863330465 25.39740194017851 26.178431940709057 24 24.91360742930195 24.73383334064537 25.159087825049813 25.19347140500286 25 25.000586669441866 24.173637830078082 25.4204379308832 25.405337569596853 26 25.01928437618614 24.824501973332463 25.510474783382374 24.645738867099016 27 25.470199364734714 24.568726704303703 24.72381877491549 25.23725515604609 28 24.772519962533902 24.351536497817538 25.64703505610732 25.22890848354124 29 24.866952351800837 24.643505764717887 25.274461789613305 25.215080093867975 30 24.776243668910013 24.765020141130762 25.647699584933537 24.81103660502569 31 25.297102491814183 24.511019346991834 24.695397883167068 25.49648027802692 32 25.086369266621368 24.69334574030654 24.58876393488788 25.631521058184216 33 24.794047844976237 24.307864035866388 24.997602241445104 25.90048587771227 34 25.272191335382782 24.421666746590404 25.347081576286524 24.95906034174029 35 26.031962077300353 24.15929411212541 25.201739824242246 24.607003986331993 36 25.089358141717984 24.81579927452311 24.80508548076874 25.28975710299017 37 25.90193707688619 24.558176076564788 24.686736354499864 24.85315049204916 38 24.957526940419353 24.43795259955532 25.201090167371916 25.40343029265341 39 25.460932701274796 24.526313211805594 24.546515685486256 25.466238401433355 40 25.712606583620634 24.581598389550443 25.078588999682683 24.627206027146237 41 24.808359240844453 24.876312253274957 25.31708855012147 24.998239955759118 42 25.94130220741655 25.036603221083453 24.759592084521557 24.262502486978434 43 25.147916617777742 24.211698038899595 25.154956622348646 25.485428720974014 44 24.951918613133845 24.82693251464888 24.641851059422983 25.579297812794294 45 25.13319933476855 24.915162583791613 24.82782544816398 25.123812633275854 46 24.91335182779945 24.731127941370026 24.83111641208718 25.524403818743345 47 25.18357689517573 24.692099944189767 25.087668999405167 25.036654161229333 48 25.792387973966107 25.023696392332674 24.30520341146426 24.87871222223696 49 25.00617272614114 25.158501323310052 24.504090323818154 25.33123562673066 50 25.10304986797373 25.18395931876895 24.60575773282128 25.107233080436032 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 72.0 1 51.5 2 31.0 3 111.0 4 191.0 5 216.5 6 242.0 7 204.5 8 167.0 9 253.0 10 339.0 11 501.5 12 664.0 13 1115.5 14 1567.0 15 1975.5 16 2384.0 17 2540.5 18 2697.0 19 2724.0 20 2751.0 21 3024.0 22 3297.0 23 3664.5 24 4032.0 25 4706.0 26 5380.0 27 6513.0 28 7646.0 29 9166.0 30 10686.0 31 12216.0 32 13746.0 33 15973.0 34 18200.0 35 21040.0 36 23880.0 37 29026.0 38 34172.0 39 37839.0 40 41506.0 41 45694.0 42 49882.0 43 51427.0 44 52972.0 45 58583.0 46 64194.0 47 68631.0 48 73068.0 49 75476.0 50 77884.0 51 75846.5 52 73809.0 53 73674.0 54 73539.0 55 73313.0 56 73087.0 57 70833.0 58 68579.0 59 62599.0 60 56619.0 61 49781.0 62 42943.0 63 37410.5 64 31878.0 65 26805.0 66 21732.0 67 18612.0 68 15492.0 69 13754.0 70 12016.0 71 9337.0 72 6658.0 73 5663.0 74 4668.0 75 3638.5 76 2609.0 77 2274.5 78 1940.0 79 1583.0 80 1226.0 81 969.0 82 712.0 83 605.0 84 498.0 85 365.0 86 232.0 87 160.5 88 89.0 89 68.5 90 48.0 91 45.5 92 43.0 93 29.5 94 16.0 95 19.0 96 22.0 97 16.0 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010304829087777759 2 6.121680646204608E-4 3 2.0405602154015363E-4 4 0.0 5 0.0 6 3.060840323102304E-4 7 0.0 8 0.0 9 0.001632448172321229 10 0.0010202801077007682 11 0.0 12 2.0405602154015363E-4 13 6.121680646204608E-4 14 2.0405602154015363E-4 15 0.005917624624664455 16 7.141960753905377E-4 17 0.0 18 4.0811204308030725E-4 19 2.0405602154015363E-4 20 2.0405602154015363E-4 21 0.0 22 0.0 23 7.141960753905377E-4 24 4.0811204308030725E-4 25 0.0014283921507810755 26 0.005611540592354225 27 0.006121680646204609 28 0.0037750363984928423 29 0.0023466442477117666 30 0.003979092420032995 31 0.007550072796985685 32 0.0029588123123322277 33 0.004183148441573149 34 0.0022446162369416903 35 0.0024486722584818434 36 0.00795818484006599 37 0.003877064409262919 38 0.009182520969306914 39 0.004591260484653457 40 0.0024486722584818434 41 0.003468952366182612 42 0.0018365041938613828 43 0.0010202801077007682 44 0.0014283921507810755 45 0.0013263641400109987 46 0.0010202801077007682 47 0.001632448172321229 48 0.001632448172321229 49 5.101400538503841E-4 50 0.0015304201615511522 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 980123.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.75531636198279 #Duplication Level Percentage of deduplicated Percentage of total 1 80.7757961431149 48.26783252922861 2 11.781530015037921 14.080181065535738 3 3.2433386260750736 5.814201770104639 4 1.3443959707677315 3.2133922619600312 5 0.6964280584391397 2.080763947769612 6 0.4545791574410425 1.6298112818671848 7 0.3013533420997201 1.2605225005736722 8 0.22767311051445693 1.0883742996726435 9 0.17378911874722047 0.9346341393909318 >10 0.8657100477036753 9.255320609006683 >50 0.06719420099434639 2.8047884927546893 >100 0.06340127259929008 7.56470285122465 >500 0.004810936465434864 2.005474250910934 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0202801077007681E-4 2 0.0 0.0 0.0 0.0 1.0202801077007681E-4 3 0.0 0.0 0.0 0.0 1.0202801077007681E-4 4 0.0 0.0 0.0 0.0 1.0202801077007681E-4 5 0.0 0.0 0.0 0.0 1.0202801077007681E-4 6 0.0 0.0 0.0 0.0 2.0405602154015363E-4 7 0.0 0.0 0.0 0.0 2.0405602154015363E-4 8 0.0 0.0 0.0 0.0 2.0405602154015363E-4 9 0.0 0.0 0.0 0.0 2.0405602154015363E-4 10 0.0 0.0 0.0 0.0 2.0405602154015363E-4 11 0.0 0.0 0.0 0.0 2.0405602154015363E-4 12 0.0 0.0 0.0 0.0 7.141960753905377E-4 13 0.0 0.0 0.0 0.0 0.0010202801077007682 14 0.0 0.0 0.0 0.0 0.0010202801077007682 15 0.0 0.0 0.0 0.0 0.0012243361292409217 16 0.0 0.0 0.0 0.0 0.0012243361292409217 17 0.0 0.0 0.0 0.0 0.0012243361292409217 18 0.0 0.0 0.0 0.0 0.0013263641400109987 19 0.0 0.0 0.0 0.0 0.0014283921507810755 20 0.0 0.0 0.0 0.0 0.0015304201615511522 21 0.0 0.0 0.0 3.060840323102304E-4 0.001734476183091306 22 0.0 0.0 0.0 3.060840323102304E-4 0.001734476183091306 23 0.0 0.0 0.0 0.0012243361292409217 0.001734476183091306 24 0.0 0.0 0.0 0.002142588226171613 0.001734476183091306 25 0.0 0.0 0.0 0.0024486722584818434 0.001734476183091306 26 0.0 0.0 0.0 0.0029588123123322277 0.0018365041938613828 27 0.0 0.0 0.0 0.0033669243554125348 0.0018365041938613828 28 0.0 0.0 0.0 0.005101400538503841 0.0018365041938613828 29 0.0 0.0 0.0 0.009488605001617145 0.0019385322046314595 30 0.0 0.0 0.0 0.015610285647821753 0.0019385322046314595 31 0.0 0.0 0.0 0.03417938360797573 0.002142588226171613 32 0.0 0.0 0.0 0.051728201460428946 0.002142588226171613 33 0.0 0.0 0.0 0.07203177560367423 0.002142588226171613 34 0.0 0.0 0.0 0.09335562985462029 0.00224461623694169 35 0.0 0.0 0.0 0.12029102469792056 0.00224461623694169 36 0.0 0.0 0.0 0.16140831303826153 0.00224461623694169 37 0.0 0.0 0.0 0.2174216909510337 0.00224461623694169 38 0.0 0.0 0.0 0.29832990349170463 0.00224461623694169 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1825 0.0 22.29938 1 GTCTATA 105 7.7496225E-8 20.95051 1 TATACCG 65 4.935915E-4 20.304844 5 TAACGAT 55 0.0044813626 20.001276 25 GTAATAC 100 1.1245047E-6 19.797222 3 TAGGACG 90 1.0028563E-5 19.552813 4 GTATATG 185 1.8189894E-12 19.025328 1 AACGCAG 2200 0.0 18.797361 6 GGCGTTA 245 0.0 17.959412 42 CGCGGGA 235 0.0 17.788368 44 GGGTATA 75 0.0012914065 17.598429 1 GTATTAA 190 3.274181E-11 17.366869 1 AAATCGC 160 2.1300366E-8 16.498526 14 GAGCGAA 405 0.0 16.294842 16 TCAACGC 2550 0.0 16.131071 4 AGAGCGA 410 0.0 16.096123 15 CGTTATT 275 0.0 16.00102 44 AGTAATA 110 5.626252E-5 15.997755 2 CAACGCA 2585 0.0 15.912662 5 GCGAAAG 415 0.0 15.901383 18 >>END_MODULE