##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063984_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1424354 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.317318587935304 32.0 32.0 32.0 32.0 32.0 2 31.425677184183144 32.0 32.0 32.0 32.0 32.0 3 31.498599365045486 32.0 32.0 32.0 32.0 32.0 4 31.57662561413806 32.0 32.0 32.0 32.0 32.0 5 31.527698170539065 32.0 32.0 32.0 32.0 32.0 6 35.12515849290275 36.0 36.0 36.0 36.0 36.0 7 35.13902161962546 36.0 36.0 36.0 36.0 36.0 8 35.08550051461926 36.0 36.0 36.0 36.0 36.0 9 35.195990603459535 36.0 36.0 36.0 36.0 36.0 10 35.05215978612058 36.0 36.0 36.0 36.0 36.0 11 35.1882642938483 36.0 36.0 36.0 36.0 36.0 12 35.09887570084403 36.0 36.0 36.0 36.0 36.0 13 35.137705233390015 36.0 36.0 36.0 36.0 36.0 14 35.079492176804365 36.0 36.0 36.0 36.0 36.0 15 35.05075564080278 36.0 36.0 36.0 36.0 36.0 16 35.06475777791195 36.0 36.0 36.0 36.0 36.0 17 35.02709930256102 36.0 36.0 36.0 36.0 36.0 18 35.0183493710131 36.0 36.0 36.0 36.0 36.0 19 35.02175793377208 36.0 36.0 36.0 36.0 36.0 20 35.0136770774681 36.0 36.0 36.0 36.0 36.0 21 35.00573031704197 36.0 36.0 36.0 36.0 36.0 22 34.990658221200626 36.0 36.0 36.0 36.0 36.0 23 34.93413154314166 36.0 36.0 36.0 36.0 36.0 24 34.903771815152695 36.0 36.0 36.0 32.0 36.0 25 34.87615508504206 36.0 36.0 36.0 32.0 36.0 26 34.815669419259535 36.0 36.0 36.0 32.0 36.0 27 34.80678539183377 36.0 36.0 36.0 32.0 36.0 28 34.773479766968045 36.0 36.0 36.0 32.0 36.0 29 34.743440886184196 36.0 36.0 36.0 32.0 36.0 30 34.72605124849581 36.0 36.0 36.0 32.0 36.0 31 34.713286163411624 36.0 36.0 36.0 32.0 36.0 32 34.67580812073403 36.0 36.0 36.0 32.0 36.0 33 34.65881234580729 36.0 36.0 36.0 32.0 36.0 34 34.64927398666343 36.0 36.0 36.0 32.0 36.0 35 34.597214596933064 36.0 36.0 36.0 32.0 36.0 36 34.5687118511269 36.0 36.0 36.0 32.0 36.0 37 34.547420795672984 36.0 36.0 36.0 32.0 36.0 38 34.502577308730835 36.0 36.0 36.0 32.0 36.0 39 34.48271637528311 36.0 36.0 36.0 32.0 36.0 40 34.465776766169085 36.0 36.0 36.0 32.0 36.0 41 34.45628755211134 36.0 36.0 36.0 32.0 36.0 42 34.38395511228248 36.0 36.0 36.0 32.0 36.0 43 34.376519460752036 36.0 36.0 36.0 32.0 36.0 44 34.29218649296453 36.0 36.0 36.0 32.0 36.0 45 34.26698278658255 36.0 36.0 36.0 32.0 36.0 46 34.22381023256859 36.0 36.0 36.0 32.0 36.0 47 34.19445657469983 36.0 36.0 36.0 32.0 36.0 48 34.144346138670585 36.0 36.0 36.0 32.0 36.0 49 34.12292239148414 36.0 36.0 36.0 32.0 36.0 50 33.545293515516505 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 2.0 20 6.0 21 45.0 22 149.0 23 415.0 24 1191.0 25 2692.0 26 5574.0 27 9914.0 28 16509.0 29 25288.0 30 36415.0 31 51561.0 32 74114.0 33 118749.0 34 246207.0 35 835522.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.03470807219661 17.66220434735596 11.532541977304101 26.77054560314333 2 15.990274841734491 20.2968096959519 37.24485676594257 26.46805869637104 3 18.207858731549504 24.401903462065558 28.699015411920648 28.69122239446429 4 12.168814774978692 15.66394309279856 35.87591286997474 36.291329262248006 5 14.147606564098531 37.088251937369506 33.39773679857676 15.366404699955208 6 34.419463139079184 35.80563539681849 16.56308754705642 13.211813917045903 7 30.230687034262548 30.305036528840446 20.930892179893483 18.533384257003526 8 28.16062579948524 33.35933342413473 19.186101207986216 19.29393956839381 9 27.95225283921771 13.427590119185362 18.175837723683173 40.44431931791375 10 15.991664923171541 26.62450450804652 31.586374620702053 25.797455948079882 11 37.82510374886001 20.373179963113078 22.77455097156393 19.027165316462984 12 25.30141797913576 23.204182115223006 29.02009406389296 22.474305841748276 13 30.2372947041697 19.125746745701715 25.055762394978192 25.581196155150394 14 23.60431465773256 19.66582745581506 24.90342990576781 31.826427980684578 15 25.23022158564327 27.891004577751566 21.83875361586205 25.040020220743113 16 25.63515337970332 25.142083251131574 24.362143615889735 24.860619753275373 17 24.063329762123743 25.83192099716784 25.195843168201165 24.908906072507257 18 24.95603254539442 24.329500705234462 26.806140910689724 23.908325838681392 19 26.17990496731145 24.196336298892408 25.02380029655591 24.599958437240232 20 26.488412846407027 23.812990754990395 24.84912267891846 24.84947371968412 21 27.181094025782915 23.607614399229405 24.08060074953277 25.13069082545491 22 26.46375334187055 24.268298847475904 24.64138078227854 24.626567028375007 23 24.419611232375257 24.042806984533964 25.57192875050813 25.965653032582654 24 25.440131203891188 24.456523265381776 25.371678831296844 24.731666699430196 25 25.173169625493042 24.274849999227705 25.31169128415826 25.240289091120992 26 24.524323732278866 25.23394145004381 25.799065919252286 24.442668898425037 27 25.157115685309446 24.707621945011795 24.91025220657053 25.225010163108237 28 24.480327681243775 24.539373774407416 25.54428070835653 25.43601783599228 29 24.781930414318172 24.363554155117264 25.264126780854813 25.590388649709755 30 24.405200297970307 24.773520802806708 25.85285574768852 24.96842315153447 31 25.680724308498128 24.192226813316438 24.5610512162499 25.565997661935537 32 24.989925002703046 24.756269316262237 24.49123018876403 25.762575492270685 33 24.401987780681345 24.530120718780147 25.454924587622568 25.61296691291594 34 25.395698707309332 24.545466034222745 25.370072371580466 24.68876288688746 35 25.74789002651816 24.488681162137098 25.546177895636262 24.217250915708483 36 24.580130482526968 24.949306723810114 25.163594644767922 25.306968148895 37 25.582427272944287 24.74334724896054 24.492908085246206 25.181317392848968 38 24.78204057903447 24.953852354214515 25.00623142421219 25.257875642538824 39 25.87195770539109 24.18501785093678 24.472598724281134 25.470425719391 40 26.0711565127341 24.486616467449494 25.16932582100293 24.272901198813475 41 24.94023400886748 24.787949210316608 25.64043515960416 24.631381621211748 42 26.043662481087665 25.367978740956303 24.93718121088087 23.65117756707516 43 25.05000565174442 24.447691174643115 25.229316897171252 25.272986276441213 44 24.68060668056315 25.110208861501565 24.61011794226242 25.599066515672863 45 24.880032407924215 25.15229828770177 24.874134952044557 25.09353435232946 46 24.731349633725607 24.61705124190679 24.967669281675327 25.683929842692276 47 25.416248633567108 24.4568495059779 25.200848961159956 24.926052899295037 48 25.718285592724715 25.13492318137172 24.19756952221011 24.949221703693457 49 25.181135509018866 25.228034160191186 24.289499476251592 25.301330854538357 50 24.91295962548242 25.90373499567168 24.149658192326406 25.033647186519502 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 18.0 1 17.5 2 17.0 3 78.0 4 139.0 5 171.0 6 203.0 7 196.5 8 190.0 9 273.0 10 356.0 11 537.0 12 718.0 13 1394.0 14 2070.0 15 2724.5 16 3379.0 17 3599.0 18 3819.0 19 3808.0 20 3797.0 21 4128.5 22 4460.0 23 5009.5 24 5559.0 25 6124.0 26 6689.0 27 8627.5 28 10566.0 29 13147.0 30 15728.0 31 19066.5 32 22405.0 33 27228.0 34 32051.0 35 38485.5 36 44920.0 37 50736.0 38 56552.0 39 59354.0 40 62156.0 41 66469.0 42 70782.0 43 71798.0 44 72814.0 45 80098.0 46 87382.0 47 93715.5 48 100049.0 49 104917.5 50 109786.0 51 107021.0 52 104256.0 53 103299.5 54 102343.0 55 102934.0 56 103525.0 57 101106.0 58 98687.0 59 90286.0 60 81885.0 61 72552.0 62 63219.0 63 55102.0 64 46985.0 65 39979.5 66 32974.0 67 28451.5 68 23929.0 69 21471.0 70 19013.0 71 14832.0 72 10651.0 73 9210.0 74 7769.0 75 6084.5 76 4400.0 77 3826.5 78 3253.0 79 2645.5 80 2038.0 81 1634.5 82 1231.0 83 1031.0 84 831.0 85 601.5 86 372.0 87 273.0 88 174.0 89 130.0 90 86.0 91 71.5 92 57.0 93 39.0 94 21.0 95 25.0 96 29.0 97 20.0 98 11.0 99 10.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009267359097527721 2 4.914508612325307E-4 3 1.4041453178072305E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0012637307860265076 10 8.424871906843382E-4 11 7.020726589036153E-5 12 2.1062179767108454E-4 13 4.914508612325307E-4 14 0.0 15 0.005195337675886753 16 9.126944565746998E-4 17 0.0 18 3.510363294518076E-4 19 1.4041453178072305E-4 20 0.0012637307860265076 21 0.0 22 1.4041453178072305E-4 23 4.914508612325307E-4 24 4.212435953421691E-4 25 0.0019658034449301226 26 0.004633679548763861 27 0.00596761760068073 28 0.0030189124332855454 29 0.0026678761038337376 30 0.003580570560408438 31 0.006950519323145791 32 0.002527461572053015 33 0.0036507778262987994 34 0.0026678761038337376 35 0.0032997414968469916 36 0.007161141120816876 37 0.003931606889860245 38 0.008495079172733745 39 0.00414222868753133 40 0.002036010710820484 41 0.003440156028627715 42 0.0013339380519168688 43 0.001053108988355423 44 9.126944565746998E-4 45 7.722799247939768E-4 46 8.424871906843382E-4 47 0.0017551816472590382 48 0.0017551816472590382 49 4.212435953421691E-4 50 0.001053108988355423 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1424354.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.46957724801607 #Duplication Level Percentage of deduplicated Percentage of total 1 75.64707337465522 39.691699600178126 2 13.984705027348717 14.675431214463849 3 4.632118278146752 7.2913586345150465 4 1.9350264316645518 4.061200753327044 5 1.04433037024206 2.7397786516932503 6 0.6308134167672594 1.985910798009281 7 0.38865021072565326 1.4274618577889173 8 0.2948872875664554 1.237808905154085 9 0.22850674319779743 1.0790686992518463 >10 1.0506748991323172 9.687477861580135 >50 0.07649904740951222 2.8019783433495378 >100 0.07484729380404273 8.25638207395007 >500 0.009170433126199978 3.2662866865123785 >1k 0.0026971862135882286 1.7981559202264419 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1701 0.11942255927950496 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1505 0.10566193516499409 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1452 0.10194095007280493 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1429 0.10032618295732663 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.808290635614461E-4 2 0.0 0.0 0.0 0.0 2.808290635614461E-4 3 0.0 7.020726589036153E-5 0.0 0.0 2.808290635614461E-4 4 0.0 7.020726589036153E-5 0.0 0.0 2.808290635614461E-4 5 0.0 1.4041453178072305E-4 0.0 0.0 4.2124359534216914E-4 6 0.0 1.4041453178072305E-4 0.0 0.0 5.616581271228922E-4 7 0.0 1.4041453178072305E-4 0.0 0.0 5.616581271228922E-4 8 0.0 1.4041453178072305E-4 0.0 0.0 5.616581271228922E-4 9 0.0 1.4041453178072305E-4 0.0 7.020726589036153E-5 5.616581271228922E-4 10 0.0 1.4041453178072305E-4 0.0 7.020726589036153E-5 5.616581271228922E-4 11 0.0 1.4041453178072305E-4 0.0 7.020726589036153E-5 5.616581271228922E-4 12 0.0 2.1062179767108457E-4 0.0 1.4041453178072305E-4 0.001053108988355423 13 0.0 2.1062179767108457E-4 0.0 1.4041453178072305E-4 0.0012637307860265074 14 0.0 2.1062179767108457E-4 0.0 1.4041453178072305E-4 0.0012637307860265074 15 0.0 2.1062179767108457E-4 0.0 1.4041453178072305E-4 0.001474352583697592 16 0.0 2.1062179767108457E-4 0.0 1.4041453178072305E-4 0.001614767115478315 17 0.0 2.1062179767108457E-4 0.0 2.1062179767108457E-4 0.001614767115478315 18 0.0 2.1062179767108457E-4 0.0 2.808290635614461E-4 0.0018253889131493997 19 0.0 2.1062179767108457E-4 0.0 3.510363294518076E-4 0.0018253889131493997 20 0.0 3.510363294518076E-4 0.0 3.510363294518076E-4 0.0023168397743819303 21 0.0 3.510363294518076E-4 0.0 4.2124359534216914E-4 0.0024572543061626533 22 0.0 3.510363294518076E-4 0.0 4.914508612325307E-4 0.0024572543061626533 23 0.0 3.510363294518076E-4 0.0 0.001053108988355423 0.0024572543061626533 24 0.0 3.510363294518076E-4 0.0 0.0014041453178072305 0.0024572543061626533 25 0.0 3.510363294518076E-4 0.0 0.001614767115478315 0.0024572543061626533 26 0.0 3.510363294518076E-4 0.0 0.0019658034449301226 0.0027380833697240995 27 0.0 3.510363294518076E-4 0.0 0.0024572543061626533 0.002808290635614461 28 0.0 3.510363294518076E-4 0.0 0.004282643219312053 0.002808290635614461 29 0.0 3.510363294518076E-4 0.0 0.008565286438624106 0.002808290635614461 30 0.0 3.510363294518076E-4 0.0 0.01614767115478315 0.002808290635614461 31 0.0 3.510363294518076E-4 0.0 0.03461218208394823 0.002808290635614461 32 0.0 3.510363294518076E-4 0.0 0.05384897293790729 0.002808290635614461 33 0.0 3.510363294518076E-4 0.0 0.0728049347283049 0.002808290635614461 34 0.0 3.510363294518076E-4 0.0 0.09520105254733023 0.003018912433285546 35 0.0 4.2124359534216914E-4 0.0 0.11914173021594351 0.003018912433285546 36 0.0 4.2124359534216914E-4 0.0 0.15684303199906766 0.003018912433285546 37 0.0 4.2124359534216914E-4 0.0 0.20942827415094842 0.003018912433285546 38 0.0 4.2124359534216914E-4 0.0 0.2802674054343232 0.0030891196991759073 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2865 0.0 20.964287 1 GTATAGA 180 0.0 19.556429 1 ACCGTCG 395 0.0 18.936226 8 ATACGCA 70 8.119937E-4 18.858648 25 CGTAAGG 70 8.127607E-4 18.855999 2 GTCCTAA 550 0.0 18.800838 1 CATAACG 60 0.007415327 18.332224 2 GGCGTTA 460 0.0 18.17345 42 TGTAGGA 1195 0.0 18.040747 2 GTAGGAC 1120 0.0 17.873915 3 ATACCGT 450 0.0 17.599548 6 TAGGACG 1060 0.0 17.433517 4 TACCGTC 455 0.0 17.406149 7 GTCTTAC 165 1.6589183E-9 17.334108 1 TAGGACA 530 0.0 17.018435 4 GATTTCG 440 0.0 16.999567 41 TGTACTA 130 7.320996E-7 16.922644 5 TTAGGAC 700 0.0 16.656134 3 CCGTCGT 445 0.0 16.314192 9 AACGCAG 3615 0.0 16.309404 6 >>END_MODULE