##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063982_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 933500 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25785216925549 32.0 32.0 32.0 32.0 32.0 2 30.896765934654525 32.0 32.0 32.0 32.0 32.0 3 30.912791644349223 32.0 32.0 32.0 32.0 32.0 4 30.928104981253348 32.0 32.0 32.0 32.0 32.0 5 30.863361542581682 32.0 32.0 32.0 32.0 32.0 6 34.51048205677557 36.0 36.0 36.0 32.0 36.0 7 34.448334226031065 36.0 36.0 36.0 32.0 36.0 8 34.40453668987681 36.0 36.0 36.0 32.0 36.0 9 34.52964649169791 36.0 36.0 36.0 32.0 36.0 10 34.25771612212105 36.0 36.0 36.0 32.0 36.0 11 34.52034172469202 36.0 36.0 36.0 32.0 36.0 12 34.34534118907338 36.0 36.0 36.0 32.0 36.0 13 34.41489341189073 36.0 36.0 36.0 32.0 36.0 14 34.32490626673808 36.0 36.0 36.0 32.0 36.0 15 34.25512587038029 36.0 36.0 36.0 32.0 36.0 16 34.2635961435458 36.0 36.0 36.0 32.0 36.0 17 34.20374076057847 36.0 36.0 36.0 32.0 36.0 18 34.18793572576325 36.0 36.0 36.0 32.0 36.0 19 34.204440278521695 36.0 36.0 36.0 32.0 36.0 20 34.183811462238886 36.0 36.0 36.0 32.0 36.0 21 34.172188537761116 36.0 36.0 36.0 32.0 36.0 22 34.14407070166042 36.0 36.0 36.0 32.0 36.0 23 34.09444349223353 36.0 36.0 36.0 32.0 36.0 24 34.085163363685055 36.0 36.0 36.0 32.0 36.0 25 33.69932297803964 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 11.0 5 15.0 6 35.0 7 19.0 8 57.0 9 64.0 10 88.0 11 30.0 12 57.0 13 62.0 14 100.0 15 173.0 16 262.0 17 339.0 18 458.0 19 642.0 20 877.0 21 1349.0 22 2120.0 23 3103.0 24 4741.0 25 6898.0 26 9934.0 27 13380.0 28 18023.0 29 24688.0 30 32598.0 31 43175.0 32 61509.0 33 86535.0 34 188108.0 35 434046.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.72435648063306 16.936141573724882 11.08817707646786 26.25132486917419 2 16.9134567176459 19.848047891053852 36.89338069873973 26.345114692560518 3 18.75196174319563 23.935677319624073 28.435608223413222 28.876752713767072 4 12.728344010455725 15.246930773680715 35.61963019304523 36.40509502281834 5 14.682098388475707 36.533026498764734 33.55992380560573 15.22495130715383 6 34.19605406245145 35.19512730818061 16.9849951519502 13.62382347741773 7 30.338026146746227 30.363313549869225 20.961328488724067 18.33733181466048 8 28.50729745920464 32.194124524585455 19.63589327566381 19.662684740546098 9 27.85092866796784 13.846257729074827 18.37432462703764 39.92848897591969 10 15.906194293750609 26.62258938993919 31.776264943879724 25.69495137243048 11 37.11540770213605 20.919655796324722 22.600692866391693 19.364243635147535 12 24.818590251416918 23.58675132633601 28.801939897066248 22.79271852518082 13 29.72886345193391 19.23458301486518 25.19234047023587 25.84421306296504 14 23.769399571405753 19.165173876548135 25.51893887011064 31.54648768193547 15 25.426277815116507 26.785264460001653 22.270315928485445 25.518141796396403 16 25.782618483539338 25.42467544997481 23.65972363667549 25.13298242981036 17 24.173450507796503 25.4462113042341 25.320253758894744 25.060084429074646 18 24.86448586107228 24.695950871836217 26.009172934910328 24.430390332181176 19 25.632545329601115 24.673368504222328 25.628900307575535 24.06518585860102 20 25.922503093057614 23.926113983193495 25.11820090186484 25.033182021884056 21 26.81000471718341 23.930164243749733 24.562588447188986 24.69724259187787 22 25.997066694112803 23.965302079044875 24.858802490736927 25.17882873610539 23 24.75701975685357 23.94345810875865 25.18942541404477 26.110096720343005 24 24.84524123498245 24.636716262374804 25.315682150047923 25.202360352594823 25 25.125569417776017 24.237872701288982 25.244143399471024 25.39241448146397 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 250.0 1 250.0 2 400.5 3 551.0 4 551.0 5 551.0 6 1444.5 7 2338.0 8 2338.0 9 2338.0 10 2280.0 11 2222.0 12 2222.0 13 2222.0 14 2327.5 15 2433.0 16 2433.0 17 2433.0 18 4164.5 19 5896.0 20 5896.0 21 5896.0 22 9243.0 23 12590.0 24 12590.0 25 12590.0 26 18376.5 27 24163.0 28 24163.0 29 24163.0 30 30592.5 31 37022.0 32 37022.0 33 37022.0 34 45963.5 35 54905.0 36 54905.0 37 54905.0 38 64201.5 39 73498.0 40 73498.0 41 73498.0 42 84893.5 43 96289.0 44 96289.0 45 96289.0 46 108657.5 47 121026.0 48 121026.0 49 121026.0 50 125951.0 51 130876.0 52 130876.0 53 130876.0 54 121468.5 55 112061.0 56 112061.0 57 112061.0 58 103198.5 59 94336.0 60 94336.0 61 94336.0 62 82508.0 63 70680.0 64 70680.0 65 70680.0 66 58110.5 67 45541.0 68 45541.0 69 45541.0 70 34202.0 71 22863.0 72 22863.0 73 22863.0 74 17286.0 75 11709.0 76 11709.0 77 11709.0 78 9382.0 79 7055.0 80 7055.0 81 7055.0 82 4814.0 83 2573.0 84 2573.0 85 2573.0 86 1960.5 87 1348.0 88 1348.0 89 1348.0 90 968.0 91 588.0 92 588.0 93 588.0 94 397.5 95 207.0 96 207.0 97 207.0 98 343.5 99 480.0 100 480.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0416711301553294 2 0.005141938939475094 3 0.0020353508302088912 4 0.004284949116229245 5 0.01049812533476165 6 0.0144617032672737 7 0.024531333690412428 8 0.03931440814140332 9 0.05324049276914836 10 0.06352437064809856 11 0.06041778253883236 12 0.07145152651312266 13 0.0695232994108195 14 0.07316550615961435 15 0.06416711301553295 16 0.07177289769683985 17 0.0692019282271023 18 0.08098553829673273 19 0.07723620782003214 20 0.08205677557579004 21 0.07927155865024102 22 0.08184252811997858 23 0.08687734333154794 24 0.08119978575254419 25 0.08023567220139262 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 933500.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.14320885641443 #Duplication Level Percentage of deduplicated Percentage of total 1 78.63759368613918 45.722420336590474 2 13.040391805205909 15.164204485991247 3 3.7340909260400053 6.51336085804758 4 1.5819493076016322 3.679184359685676 5 0.799105054034412 2.3231266027469575 6 0.4913396061153475 1.7140836802675832 7 0.3304272188562085 1.3448469158460483 8 0.23616195874603071 1.0984971273048312 9 0.17283558033571522 0.9044293720751178 >10 0.8371422583692185 8.597192952903834 >50 0.06791210956018733 2.7825938298741955 >100 0.06549966962885226 7.515811077647749 >500 0.004625682806161738 1.7328042129902914 >1k 9.251365612323477E-4 0.9074441880283795 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2652 0.28409212640599896 No Hit TATCAACGCAGAGTACTTTTTTTTT 1957 0.2096411355115158 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1736 0.18596679164434923 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1075 0.11515800749866095 No Hit GGTATCAACGCAGAGTACTTTTTTT 1015 0.10873058382431708 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 3.2137118371719335E-4 13 0.0 0.0 0.0 0.0 4.2849491162292447E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATGCG 40 0.0052777994 14.249679 13 TAGTACA 40 0.005279677 14.248915 4 GCGTTAT 80 1.2902638E-7 14.246624 1 GTATATA 80 1.2902638E-7 14.246624 1 AACCGCG 95 4.8821676E-9 14.001935 7 AGAACCG 120 5.0931703E-11 13.458029 5 CGTTATT 85 2.7081842E-7 13.406432 2 TATACCG 50 0.0014990184 13.2997 5 GTCTAAA 50 0.0015014423 13.296849 1 GAACCGC 110 2.73576E-9 12.955642 6 TCGCGTA 60 4.0845346E-4 12.668418 9 TCGTCGC 60 4.0900803E-4 12.66638 13 CGGACAT 70 1.0902292E-4 12.214009 5 CGGTCCA 125 1.4042598E-9 12.161029 10 CGCGGTC 110 3.801688E-8 12.091932 10 TATACTG 55 0.0030673845 12.090635 5 GTATTAT 110 3.8186045E-8 12.088044 1 GCTATAC 55 0.0030747815 12.086748 3 TGCGGTA 135 3.6925485E-10 11.963335 15 TAGAACC 160 3.6379788E-12 11.874096 4 >>END_MODULE